CB291044

Overview
NameCB291044
Unique NameCB291044
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length773
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB291044 vs. ExPASy Swiss-Prot
Match: TIP11_ARATH (Aquaporin TIP1-1 OS=Arabidopsis thaliana GN=TIP1-1 PE=1 SV=1)

HSP 1 Score: 322.398 bits (825), Expect = 1.709e-87
Identity = 156/210 (74.29%), Postives = 170/210 (80.95%), Query Frame = -2
Query:  137 MAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXANISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKLVTNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEFFFINQSHEQLPTTEY 766
            MAFNKLT NGA TPS                    ANISGGHVNPAVTFGAF+GGNI+LLRGILYWIAQLLGS VACL+LK  T G    AF LS+GVG  NA VFEIVMTFGLVYTVYATA+DPK GSLGTIAPIAIGFIVGANILAGGAF GASMNPAV+FGPA+VSW+W NHWVYW GPL+GGG+AG++YE FFIN +HEQLPTT+Y
Sbjct:   42 MAFNKLTENGATTPSGLVAAAVAHAFGLFVAVSVGANISGGHVNPAVTFGAFIGGNITLLRGILYWIAQLLGSVVACLILKFATGGLAVPAFGLSAGVGVLNAFVFEIVMTFGLVYTVYATAIDPKNGSLGTIAPIAIGFIVGANILAGGAFSGASMNPAVAFGPAVVSWTWTNHWVYWAGPLVGGGIAGLIYEVFFINTTHEQLPTTDY 251          
BLAST of CB291044 vs. ExPASy Swiss-Prot
Match: TIP11_ORYSJ (Probable aquaporin TIP1-1 OS=Oryza sativa subsp. japonica GN=TIP1-1 PE=2 SV=1)

HSP 1 Score: 308.145 bits (788), Expect = 3.336e-83
Identity = 152/210 (72.38%), Postives = 167/210 (79.52%), Query Frame = -2
Query:  137 MAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXANISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKLVTNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEFFFINQSHEQLPTTEY 766
            MAF+KLT  GA TP+                    ANISGGHVNPAVTFGAFVGGNI+L RG+LYWIAQLLGSTVAC LL+  T G  T  F L+ GV  W A+V EIVMTFGLVYTVYATA+DPKKGSLGTIAPIAIGFIVGANIL GGAFDGASMNPAVSFGPALVSWSW++ WVYWVGPLIGGGLAG++YE  FI+ +HEQLPTT+Y
Sbjct:   42 MAFSKLTGGGATTPAGLIAAAVAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGNITLFRGLLYWIAQLLGSTVACFLLRFSTGGLATGTFGLT-GVSVWEALVLEIVMTFGLVYTVYATAVDPKKGSLGTIAPIAIGFIVGANILVGGAFDGASMNPAVSFGPALVSWSWESQWVYWVGPLIGGGLAGVIYEVLFISHTHEQLPTTDY 250          
BLAST of CB291044 vs. ExPASy Swiss-Prot
Match: TIP12_ARATH (Aquaporin TIP1-2 OS=Arabidopsis thaliana GN=TIP1-2 PE=1 SV=2)

HSP 1 Score: 307.76 bits (787), Expect = 4.357e-83
Identity = 151/211 (71.56%), Postives = 169/211 (80.09%), Query Frame = -2
Query:  137 MAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXANISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKLVTNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEFFFINQ-SHEQLPTTEY 766
            +AFNK+T NGA TPS                    ANISGGHVNPAVTFG  +GGNI+LLRGILYWIAQLLGS  AC LL   T G+   AF LS+GVG+ NA+VFEIVMTFGLVYTVYATA+DPK GSLGTIAPIAIGFIVGANILAGGAF GASMNPAV+FGPA+VSW+W NHWVYW GPLIGGGLAGI+Y+F FI++ +HEQLPTT+Y
Sbjct:   43 IAFNKITDNGATTPSGLVAAALAHAFGLFVAVSVGANISGGHVNPAVTFGVLLGGNITLLRGILYWIAQLLGSVAACFLLSFATGGEPIPAFGLSAGVGSLNALVFEIVMTFGLVYTVYATAVDPKNGSLGTIAPIAIGFIVGANILAGGAFSGASMNPAVAFGPAVVSWTWTNHWVYWAGPLIGGGLAGIIYDFVFIDENAHEQLPTTDY 253          
BLAST of CB291044 vs. ExPASy Swiss-Prot
Match: TIP11_MAIZE (Aquaporin TIP1-1 OS=Zea mays GN=TIP1-1 PE=2 SV=1)

HSP 1 Score: 303.523 bits (776), Expect = 8.217e-82
Identity = 149/210 (70.95%), Postives = 164/210 (78.10%), Query Frame = -2
Query:  137 MAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXANISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKLVTNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEFFFINQSHEQLPTTEY 766
            MAF+KLT  G  TP+                    ANISGGHVNPAVTFGAFVGGNI+L RG+LYW+AQLLGSTVAC LL+  T GQ T  F L+ GV  W A+V EIVMTFGLVYTVYATA+DPKKGSLGTIAPIAIGFIVGANIL GGAFDGASMNPAVSFGPALVSW W   WVYWVGPLIGGGLAG++YE  FI+ +HEQLP+T+Y
Sbjct:   42 MAFSKLTGGGPTTPAGLIAAAVAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGNITLFRGLLYWVAQLLGSTVACFLLRFSTGGQATGTFGLT-GVSVWEALVLEIVMTFGLVYTVYATAVDPKKGSLGTIAPIAIGFIVGANILVGGAFDGASMNPAVSFGPALVSWEWGYQWVYWVGPLIGGGLAGVIYELLFISHTHEQLPSTDY 250          
BLAST of CB291044 vs. ExPASy Swiss-Prot
Match: TIP12_ORYSJ (Probable aquaporin TIP1-2 OS=Oryza sativa subsp. japonica GN=TIP1-2 PE=2 SV=1)

HSP 1 Score: 299.671 bits (766), Expect = 1.187e-80
Identity = 145/211 (68.72%), Postives = 165/211 (78.20%), Query Frame = -2
Query:  137 MAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXANISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKLVTNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEFFFINQ-SHEQLPTTEY 766
            MAF+KLT  G  TPS                    ANISGGHVNPAVTFGAFVGGNISL++ ++YW+AQLLGS VACLLLK+ T G    AF+LS+GVGAWNAVVFEIVMTFGLVYTVYATA+DPKKG LG IAPIAIGFIVGANILAGGAFDGASMNPAVSFGPA+V+  WDNHWVYW+GP +G  +A ++Y+  FI Q  H+QLPT +Y
Sbjct:   42 MAFSKLTDGGGTTPSGLIAASLAHALALFVAVAVGANISGGHVNPAVTFGAFVGGNISLVKAVVYWVAQLLGSVVACLLLKIATGGAAVGAFSLSAGVGAWNAVVFEIVMTFGLVYTVYATAVDPKKGDLGVIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVTGVWDNHWVYWLGPFVGAAIAALIYDIIFIGQRPHDQLPTADY 252          
BLAST of CB291044 vs. ExPASy Swiss-Prot
Match: TIP12_MAIZE (Aquaporin TIP1-2 OS=Zea mays GN=TIP1-2 PE=2 SV=1)

HSP 1 Score: 290.041 bits (741), Expect = 9.402e-78
Identity = 145/209 (69.38%), Postives = 163/209 (77.99%), Query Frame = -2
Query:  143 MAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXANISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKLVTNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEFFFINQ-SHEQLPTT 766
            MAF+KLT  GA TP+                    ANISGGHVNPAVTFGAFVGGNISLL+ ++YW+AQLLGS VACLLLK+ T G    AF+LS+GVGA NAVV E+VMTFGLVYTVYATA+DPKKG LG IAPIAIGFIVGANILAGGAFDGASMNPAVSFGPA+V+  W+NHWVYWVGPL G  +A +VY+  FI Q  H+QLPTT
Sbjct:   42 MAFSKLTDGGAATPAGLIAASLAHALALFVAVSVGANISGGHVNPAVTFGAFVGGNISLLKALVYWVAQLLGSVVACLLLKIATGGAALGAFSLSAGVGAMNAVVLEMVMTFGLVYTVYATAVDPKKGDLGVIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVTGVWENHWVYWVGPLAGAAIAALVYDIIFIGQRPHQQLPTT 250          
BLAST of CB291044 vs. ExPASy Swiss-Prot
Match: TIP1_MEDTR (Probable aquaporin TIP-type OS=Medicago truncatula GN=AQP1 PE=1 SV=1)

HSP 1 Score: 289.656 bits (740), Expect = 1.228e-77
Identity = 147/210 (70.00%), Postives = 164/210 (78.10%), Query Frame = -2
Query:  137 MAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXANISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKLVTNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEFFFINQSHEQLPTTEY 766
            +A+NKLT++GA TP+                    ANISGGHVNPAVTFGAFVGGNI+LLRGI+Y IAQLLGS VA  LL  VT   +  AF LS GVG   A+V EIVMTFGLVYTVYATA+DPKKG++G IAPIAIGFIVGANIL GGAF GASMNPAVSFGPA+VSWSW NHWVYW GPLIGGG+AG+VYE  FIN +HEQLPTT+Y
Sbjct:   42 IAYNKLTNDGAATPAGLISASIAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGNITLLRGIVYIIAQLLGSIVASALLVFVT-ASSVPAFGLSEGVGVGPALVLEIVMTFGLVYTVYATAVDPKKGNIGIIAPIAIGFIVGANILVGGAFTGASMNPAVSFGPAVVSWSWSNHWVYWAGPLIGGGIAGLVYEVLFINSTHEQLPTTDY 250          
BLAST of CB291044 vs. ExPASy Swiss-Prot
Match: TIP13_ARATH (Aquaporin TIP1-3 OS=Arabidopsis thaliana GN=TIP1-3 PE=1 SV=1)

HSP 1 Score: 286.189 bits (731), Expect = 1.358e-76
Identity = 141/211 (66.82%), Postives = 161/211 (76.30%), Query Frame = -2
Query:  137 MAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXANISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKLVTNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEFFFI-NQSHEQLPTTEY 766
            MA+ KLT +G  TP+                    AN+SGGHVNPAVTFGAF+GGNI+LLR ILYWIAQLLG+ VACLLLK+ T G  T+AF+LS GV  WNAVVFEIVMTFGLVYTVYATA+DPKKG +G IAP+AIG IVGANIL GGAFDGASMNPAVSFGPA+VSW W NHWVYWVGP IG  +A IVY+  FI +  HE LP+ ++
Sbjct:   42 MAYGKLTGDGPATPAGLVAASLSHAFALFVAVSVGANVSGGHVNPAVTFGAFIGGNITLLRAILYWIAQLLGAVVACLLLKVSTGGMETAAFSLSYGVTPWNAVVFEIVMTFGLVYTVYATAVDPKKGDIGIIAPLAIGLIVGANILVGGAFDGASMNPAVSFGPAVVSWIWTNHWVYWVGPFIGAAIAAIVYDTIFIGSNGHEPLPSNDF 252          
BLAST of CB291044 vs. ExPASy Swiss-Prot
Match: TIP1_MEDSA (Probable aquaporin TIP-type OS=Medicago sativa GN=MCP1 PE=2 SV=2)

HSP 1 Score: 281.567 bits (719), Expect = 3.344e-75
Identity = 145/210 (69.05%), Postives = 162/210 (77.14%), Query Frame = -2
Query:  137 MAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXANISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKLVTNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEFFFINQSHEQLPTTEY 766
            +A+NKLT++GA TP+                    ANISGGHVNPAV FGAFVGGNI+LLRGI+Y IAQLLGS V   LL  VT   +  AF LS GVG   A+V EIVMTFGLVYTVYATA+DPKKG++G IAPIAIGFIVGANIL GGAF GASMNPAVSFGPA+VSWSW NHWVYW GPLIGGG+AG+VYE  FIN +HEQLPTT+Y
Sbjct:   42 IAYNKLTNDGAATPAGLISASIAHAFALFVAVSVGANISGGHVNPAV-FGAFVGGNITLLRGIVYIIAQLLGSIVCSALLVFVT-ASSVPAFGLSEGVGVGPALVLEIVMTFGLVYTVYATAVDPKKGNIGIIAPIAIGFIVGANILVGGAFTGASMNPAVSFGPAVVSWSWSNHWVYWAGPLIGGGIAGLVYEVLFINSTHEQLPTTDY 249          
BLAST of CB291044 vs. ExPASy Swiss-Prot
Match: TIP31_MAIZE (Aquaporin TIP3-1 OS=Zea mays GN=TIP3-1 PE=2 SV=1)

HSP 1 Score: 244.202 bits (622), Expect = 5.916e-64
Identity = 109/170 (64.12%), Postives = 134/170 (78.82%), Query Frame = -2
Query:  149 NISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKLVTNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEFFFINQSHEQLP 658
            NISGGHVNPAVTFGA VGG +SL+R +LYW+AQLLG+  A LLL+L T G     FAL+SGVG W+AV+ E VMTFGL+Y  YAT +DPK+G +GTIAP+A+GF++GAN+LAGG FDGA MNPA  FGPALV W W +HWVYW+GP +G GLAG+VYE+  I  +   +P
Sbjct:   82 NISGGHVNPAVTFGALVGGRVSLVRAVLYWVAQLLGAVAATLLLRLATGGMRPPGFALASGVGDWHAVLLEAVMTFGLMYAYYATVIDPKRGHVGTIAPLAVGFLLGANVLAGGPFDGAGMNPARVFGPALVGWRWRHHWVYWLGPFLGAGLAGLVYEYLVIPSADAAVP 251          
The following BLAST results are available for this feature:
BLAST of CB291044 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 190
Match NameE-valueIdentityDescription
TIP11_ARATH1.709e-8774.29Aquaporin TIP1-1 OS=Arabidopsis thaliana GN=TIP1-1... [more]
TIP11_ORYSJ3.336e-8372.38Probable aquaporin TIP1-1 OS=Oryza sativa subsp. j... [more]
TIP12_ARATH4.357e-8371.56Aquaporin TIP1-2 OS=Arabidopsis thaliana GN=TIP1-2... [more]
TIP11_MAIZE8.217e-8270.95Aquaporin TIP1-1 OS=Zea mays GN=TIP1-1 PE=2 SV=1[more]
TIP12_ORYSJ1.187e-8068.72Probable aquaporin TIP1-2 OS=Oryza sativa subsp. j... [more]
TIP12_MAIZE9.402e-7869.38Aquaporin TIP1-2 OS=Zea mays GN=TIP1-2 PE=2 SV=1[more]
TIP1_MEDTR1.228e-7770.00Probable aquaporin TIP-type OS=Medicago truncatula... [more]
TIP13_ARATH1.358e-7666.82Aquaporin TIP1-3 OS=Arabidopsis thaliana GN=TIP1-3... [more]
TIP1_MEDSA3.344e-7569.05Probable aquaporin TIP-type OS=Medicago sativa GN=... [more]
TIP31_MAIZE5.916e-6464.12Aquaporin TIP3-1 OS=Zea mays GN=TIP3-1 PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_02bb04_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_02bb04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB291044 ID=CB291044; Name=CB291044; organism=Citrus sinensis; type=EST; length=773bp
TTTTTTTTTTTTTTTTTGGAAAAGATCAACGGCCATAAATTAAACACAAA
TTAAAAATAAAAAGAAAGAACCTCGGTAAAAGCAAATTAAATACAACATC
CGTGCAAACTCACATAGATGGCAAGCTTTTAGCTTAGTACTCGGTTGTTG
GGAGCTGCTCATGCGACTGGTTAATGAAGAAAAACTCGTAAACGATGCCA
GCTAGCCCACCACCGATGAGTGGCCCGACCCAGTAAACCCAGTGGTTGTC
CCAGCTCCAGCTCACCAAAGCTGGCCCGAATGACACTGCTGGGTTCATTG
AAGCTCCATCAAACGCCCCGCCCGCCAAGATGTTGGCTCCTACAATGAAA
CCAATTGCAATTGGTGCAATTGTCCCCAAGCTTCCCTTCTTTGGGTCCAG
GGCTGTGGCATACACTGTGTACACTAGTCCGAATGTCATCACGATCTCGA
AAACGACTGCGTTCCATGCACCAACTCCAGATGAGAGAGCAAAAGCAGAT
GTGGTCTGGCCGTTGGTAACCAACTTAAGAAGCAAGCATGCGACGGTGGA
TCCAAGAAGCTGGGCGATCCAGTAGAGGATGCCACGTAGAAGGGAGATGT
TACCTCCAACGAAGGCGCCAAAGGTGACAGCAGGATTAACGTGGCCACCG
GAAATGTTGGCGCCAACGGCGACAGCAACGAAAAGGGCGAAAGCGTGAGC
AACAGAGGCGGCGACAAGGCCGGAGGGGGTATTGGCGCCGTTGTGAGTGA
GCTTGTTGAAGGCCATCCTCGTG
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