CB291054

Overview
NameCB291054
Unique NameCB291054
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length793
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB291054 vs. ExPASy Swiss-Prot
Match: ARF5_ARATH (Probable ADP-ribosylation factor At2g18390 OS=Arabidopsis thaliana GN=At2g18390 PE=2 SV=1)

HSP 1 Score: 313.923 bits (803), Expect = 6.379e-85
Identity = 153/166 (92.17%), Postives = 159/166 (95.78%), Query Frame = -1
Query:  257 LMVGLDNSGKTTIVLKINGEDTSVISPTLGFNIKTITYQKYTLNIWDVGGQRTIRSYWRNYFEQTDGLVWVVDSSDLRRLDDCKMELDNLLKEERLSGASLLILANKQDINGVFTPTEIVKVLNLEAMDKTRHWKIVGCSAYTGEGLLEGFDWLVQDIASRISLLD 754
            LMVGLDNSGKTTIVLKINGEDTSVISPTLGFNIKTI YQKYTLNIWDVGGQ+TIRSYWRNYFEQTDGLVWVVDSSDLRRLDDCKMELDNLLKEERL+G+SLLILANKQDI G  TP EI KVLNLE+MDK+RHWKIVGCSAYTGEGLLEGFDWLVQDIASRI +LD
Sbjct:   20 LMVGLDNSGKTTIVLKINGEDTSVISPTLGFNIKTIIYQKYTLNIWDVGGQKTIRSYWRNYFEQTDGLVWVVDSSDLRRLDDCKMELDNLLKEERLAGSSLLILANKQDIQGALTPDEIGKVLNLESMDKSRHWKIVGCSAYTGEGLLEGFDWLVQDIASRIYMLD 185          
BLAST of CB291054 vs. ExPASy Swiss-Prot
Match: ARL2_DICDI (ADP-ribosylation factor-like protein 2 OS=Dictyostelium discoideum GN=arl2 PE=3 SV=1)

HSP 1 Score: 229.95 bits (585), Expect = 1.212e-59
Identity = 104/166 (62.65%), Postives = 135/166 (81.33%), Query Frame = -1
Query:  257 LMVGLDNSGKTTIVLKINGEDTSVISPTLGFNIKTITYQKYTLNIWDVGGQRTIRSYWRNYFEQTDGLVWVVDSSDLRRLDDCKMELDNLLKEERLSGASLLILANKQDINGVFTPTEIVKVLNLEAMDKTRHWKIVGCSAYTGEGLLEGFDWLVQDIASRISLLD 754
            LM+GLDN+GKTTI+ K NGED S ISPTLGFNI+T+ Y++Y LNIWD+GGQ+T+RSYWRNY+E+ D ++WV+DSSD+RR+DDCK EL  LL+EE+ +GAS L+ ANKQD++G  T  EI K L+LE ++ T HW+I+ CSA TG GL EG DW+V+DI SR  +LD
Sbjct:   20 LMLGLDNAGKTTILKKFNGEDISTISPTLGFNIQTLMYKEYKLNIWDIGGQKTLRSYWRNYYEENDAVIWVIDSSDIRRIDDCKFELKKLLEEEKFAGASFLVFANKQDLDGAMTSEEISKYLDLEQLN-THHWEIMSCSAVTGLGLEEGIDWVVKDIVSRCFVLD 184          
BLAST of CB291054 vs. ExPASy Swiss-Prot
Match: ARL2_BOVIN (ADP-ribosylation factor-like protein 2 OS=Bos taurus GN=ARL2 PE=2 SV=1)

HSP 1 Score: 219.55 bits (558), Expect = 1.637e-56
Identity = 103/166 (62.05%), Postives = 131/166 (78.92%), Query Frame = -1
Query:  257 LMVGLDNSGKTTIVLKINGEDTSVISPTLGFNIKTITYQKYTLNIWDVGGQRTIRSYWRNYFEQTDGLVWVVDSSDLRRLDDCKMELDNLLKEERLSGASLLILANKQDINGVFTPTEIVKVLNLEAMDKTRHWKIVGCSAYTGEGLLEGFDWLVQDIASRISLLD 754
            LM+GLDN+GKTTI+ K NGED   ISPTLGFNIKT+ ++ + LNIWDVGGQ+++RSYWRNYFE TDGL+WVVDS+D +R+ DC+ EL NLL EERL+GA+LLI ANKQD+ G  +   I + L L+++ ++ HW I GCSA TGE LL G DWL+ DI+SRI + D
Sbjct:   20 LMLGLDNAGKTTILKKFNGEDIDTISPTLGFNIKTLEHRGFKLNIWDVGGQKSLRSYWRNYFESTDGLIWVVDSADRQRMQDCQRELQNLLVEERLAGATLLIFANKQDLPGALSSNAIREALELDSI-RSHHWCIQGCSAVTGENLLPGIDWLLDDISSRIFMAD 184          
BLAST of CB291054 vs. ExPASy Swiss-Prot
Match: ARL2_HUMAN (ADP-ribosylation factor-like protein 2 OS=Homo sapiens GN=ARL2 PE=1 SV=4)

HSP 1 Score: 218.009 bits (554), Expect = 4.764e-56
Identity = 103/166 (62.05%), Postives = 131/166 (78.92%), Query Frame = -1
Query:  257 LMVGLDNSGKTTIVLKINGEDTSVISPTLGFNIKTITYQKYTLNIWDVGGQRTIRSYWRNYFEQTDGLVWVVDSSDLRRLDDCKMELDNLLKEERLSGASLLILANKQDINGVFTPTEIVKVLNLEAMDKTRHWKIVGCSAYTGEGLLEGFDWLVQDIASRISLLD 754
            LM+GLDN+GKTTI+ K NGED   ISPTLGFNIKT+ ++ + LNIWDVGGQ+++RSYWRNYFE TDGL+WVVDS+D +R+ DC+ EL +LL EERL+GA+LLI ANKQD+ G  +   I +VL L+++ ++ HW I GCSA TGE LL G DWL+ DI+SRI   D
Sbjct:   20 LMLGLDNAGKTTILKKFNGEDIDTISPTLGFNIKTLEHRGFKLNIWDVGGQKSLRSYWRNYFESTDGLIWVVDSADRQRMQDCQRELQSLLVEERLAGATLLIFANKQDLPGALSSNAIREVLELDSI-RSHHWCIQGCSAVTGENLLPGIDWLLDDISSRIFTAD 184          
BLAST of CB291054 vs. ExPASy Swiss-Prot
Match: ARL2_RAT (ADP-ribosylation factor-like protein 2 OS=Rattus norvegicus GN=Arl2 PE=2 SV=1)

HSP 1 Score: 217.624 bits (553), Expect = 6.222e-56
Identity = 101/166 (60.84%), Postives = 131/166 (78.92%), Query Frame = -1
Query:  257 LMVGLDNSGKTTIVLKINGEDTSVISPTLGFNIKTITYQKYTLNIWDVGGQRTIRSYWRNYFEQTDGLVWVVDSSDLRRLDDCKMELDNLLKEERLSGASLLILANKQDINGVFTPTEIVKVLNLEAMDKTRHWKIVGCSAYTGEGLLEGFDWLVQDIASRISLLD 754
            LM+GLDN+GKTTI+ K NGED   ISPTLGFNIKT+ ++ + LNIWDVGGQ+++RSYWRNYFE TDGL+WVVDS+D +R+ DC+ EL +LL EERL+GA+LLI ANKQD+ G  +   I + L L+++ ++ HW+I GCSA TGE LL G DWL+ DI+SR+   D
Sbjct:   20 LMLGLDNAGKTTILKKFNGEDVDTISPTLGFNIKTLEHRGFKLNIWDVGGQKSLRSYWRNYFESTDGLIWVVDSADRQRMQDCQRELQSLLVEERLAGATLLIFANKQDLPGALSCNAIQEALELDSI-RSHHWRIQGCSAVTGEDLLPGIDWLLDDISSRVFTAD 184          
BLAST of CB291054 vs. ExPASy Swiss-Prot
Match: ARL2_MOUSE (ADP-ribosylation factor-like protein 2 OS=Mus musculus GN=Arl2 PE=1 SV=1)

HSP 1 Score: 217.624 bits (553), Expect = 6.222e-56
Identity = 101/166 (60.84%), Postives = 131/166 (78.92%), Query Frame = -1
Query:  257 LMVGLDNSGKTTIVLKINGEDTSVISPTLGFNIKTITYQKYTLNIWDVGGQRTIRSYWRNYFEQTDGLVWVVDSSDLRRLDDCKMELDNLLKEERLSGASLLILANKQDINGVFTPTEIVKVLNLEAMDKTRHWKIVGCSAYTGEGLLEGFDWLVQDIASRISLLD 754
            LM+GLDN+GKTTI+ K NGED   ISPTLGFNIKT+ ++ + LNIWDVGGQ+++RSYWRNYFE TDGL+WVVDS+D +R+ DC+ EL +LL EERL+GA+LLI ANKQD+ G  +   I + L L+++ ++ HW+I GCSA TGE LL G DWL+ DI+SR+   D
Sbjct:   20 LMLGLDNAGKTTILKKFNGEDVDTISPTLGFNIKTLEHRGFKLNIWDVGGQKSLRSYWRNYFESTDGLIWVVDSADRQRMQDCQRELQSLLVEERLAGATLLIFANKQDLPGALSCNAIQEALELDSI-RSHHWRIQGCSAVTGEDLLPGIDWLLDDISSRVFTAD 184          
BLAST of CB291054 vs. ExPASy Swiss-Prot
Match: ARL2_DROME (ADP-ribosylation factor-like protein 2 OS=Drosophila melanogaster GN=Arf84F PE=2 SV=2)

HSP 1 Score: 211.846 bits (538), Expect = 3.414e-54
Identity = 101/166 (60.84%), Postives = 126/166 (75.90%), Query Frame = -1
Query:  257 LMVGLDNSGKTTIVLKINGEDTSVISPTLGFNIKTITYQKYTLNIWDVGGQRTIRSYWRNYFEQTDGLVWVVDSSDLRRLDDCKMELDNLLKEERLSGASLLILANKQDINGVFTPTEIVKVLNLEAMDKTRHWKIVGCSAYTGEGLLEGFDWLVQDIASRISLLD 754
            L++GLDN+GKTTI+ + NGE    ISPTLGFNIKT+ +  YTLN+WDVGGQ+++RSYWRNYFE TDGLVWVVDS+D  RL+ C  EL  LL+EERL+GA+LL+L NKQD+ G  +  EI ++L+LE +  T HW + G SA TGE LL   DWL+ DIA RI  LD
Sbjct:   20 LLLGLDNAGKTTILKRFNGEPIDTISPTLGFNIKTLEHNGYTLNMWDVGGQKSLRSYWRNYFESTDGLVWVVDSADRMRLESCGQELQVLLQEERLAGATLLVLCNKQDLPGALSSNEIKEILHLEDI-TTHHWLVAGVSAVTGEKLLSSMDWLIADIAKRIFTLD 184          
BLAST of CB291054 vs. ExPASy Swiss-Prot
Match: ARL2_CAEBR (ADP-ribosylation factor-like protein 2 OS=Caenorhabditis briggsae GN=evl-20.1 PE=3 SV=1)

HSP 1 Score: 198.749 bits (504), Expect = 2.991e-50
Identity = 93/166 (56.02%), Postives = 121/166 (72.89%), Query Frame = -1
Query:  257 LMVGLDNSGKTTIVLKINGEDTSVISPTLGFNIKTITYQKYTLNIWDVGGQRTIRSYWRNYFEQTDGLVWVVDSSDLRRLDDCKMELDNLLKEERLSGASLLILANKQDINGVFTPTEIVKVLNLEAMDKTRHWKIVGCSAYTGEGLLEGFDWLVQDIASRISLLD 754
            L++GLDN+GKTT++ K   E T  I PTLGF+IKT+ ++ + LN+WDVGGQ+++RSYW+NYFE TD L+WVVDSSD  RL  C  EL  LL+EERLSGASLL+LANK D+ G      I +VL L+++ KT HWKI  C A +GE L++   WL  D+ SRI +LD
Sbjct:   20 LILGLDNAGKTTLMKKFLDEPTDTIEPTLGFDIKTVHFKDFQLNLWDVGGQKSLRSYWKNYFESTDALIWVVDSSDRERLTQCSEELKKLLQEERLSGASLLVLANKSDLPGAIDVNSIAQVLELQSI-KTHHWKIFSCCALSGERLVQAMTWLCDDVGSRIFILD 184          
BLAST of CB291054 vs. ExPASy Swiss-Prot
Match: ARL2_CAEEL (ADP-ribosylation factor-like protein 2 OS=Caenorhabditis elegans GN=evl-20 PE=2 SV=2)

HSP 1 Score: 191.43 bits (485), Expect = 4.775e-48
Identity = 89/166 (53.61%), Postives = 120/166 (72.29%), Query Frame = -1
Query:  257 LMVGLDNSGKTTIVLKINGEDTSVISPTLGFNIKTITYQKYTLNIWDVGGQRTIRSYWRNYFEQTDGLVWVVDSSDLRRLDDCKMELDNLLKEERLSGASLLILANKQDINGVFTPTEIVKVLNLEAMDKTRHWKIVGCSAYTGEGLLEGFDWLVQDIASRISLLD 754
            L++GLDN+GKTT++ K   E T  I PTLGF+IKT+ ++ + LN+WDVGGQ+++RSYW+NYFE TD L+WVVDSSD  RL  C  EL  LL EERL+GASLL+LANK D+ G      I +VL+L ++ K+ HWKI  C A +G+ L++   WL  D+ SR+ +LD
Sbjct:   20 LILGLDNAGKTTLMKKFLDEPTDTIEPTLGFDIKTVHFKDFQLNLWDVGGQKSLRSYWKNYFESTDALIWVVDSSDRERLLQCSEELKKLLGEERLAGASLLVLANKSDLPGAIDVNSIAQVLDLHSI-KSHHWKIFSCCALSGDRLVQAMTWLCDDVGSRLFILD 184          
BLAST of CB291054 vs. ExPASy Swiss-Prot
Match: ARL3_TAEGU (ADP-ribosylation factor-like protein 3 OS=Taeniopygia guttata GN=ARL3 PE=2 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 5.654e-41
Identity = 78/161 (48.45%), Postives = 117/161 (72.67%), Query Frame = -1
Query:  272 LMVGLDNSGKTTIVLKINGEDTSVISPTLGFNIKTITYQKYTLNIWDVGGQRTIRSYWRNYFEQTDGLVWVVDSSDLRRLDDCKMELDNLLKEERLSGASLLILANKQDINGVFTPTEIVKVLNLEAMDKTRHWKIVGCSAYTGEGLLEGFDWLVQDIASR 754
            L++GLDN+GKTT++ ++  ED S I+PT GFNIK++  Q + LN+WD+GGQR IR YWRNYFE TD L++V+DS+D +R ++   EL  LL EE+LSG  +LI ANKQD+      +EI + LNL  + + R W+I  CSA +GEG+ +G +W+ ++++++
Sbjct:   21 LLLGLDNAGKTTLLKQLASEDISHITPTQGFNIKSVQSQGFKLNVWDIGGQRKIRPYWRNYFENTDILIYVIDSADRKRFEETGQELAELLDEEKLSGVPVLIFANKQDLLTAAPASEIAEGLNLHTI-RDRVWQIQSCSALSGEGVQDGMNWVCKNVSTK 180          
The following BLAST results are available for this feature:
BLAST of CB291054 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 219
Match NameE-valueIdentityDescription
ARF5_ARATH6.379e-8592.17Probable ADP-ribosylation factor At2g18390 OS=Arab... [more]
ARL2_DICDI1.212e-5962.65ADP-ribosylation factor-like protein 2 OS=Dictyost... [more]
ARL2_BOVIN1.637e-5662.05ADP-ribosylation factor-like protein 2 OS=Bos taur... [more]
ARL2_HUMAN4.764e-5662.05ADP-ribosylation factor-like protein 2 OS=Homo sap... [more]
ARL2_RAT6.222e-5660.84ADP-ribosylation factor-like protein 2 OS=Rattus n... [more]
ARL2_MOUSE6.222e-5660.84ADP-ribosylation factor-like protein 2 OS=Mus musc... [more]
ARL2_DROME3.414e-5460.84ADP-ribosylation factor-like protein 2 OS=Drosophi... [more]
ARL2_CAEBR2.991e-5056.02ADP-ribosylation factor-like protein 2 OS=Caenorha... [more]
ARL2_CAEEL4.775e-4853.61ADP-ribosylation factor-like protein 2 OS=Caenorha... [more]
ARL3_TAEGU5.654e-4148.45ADP-ribosylation factor-like protein 3 OS=Taeniopy... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_02bb09_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_02bb09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB291054 ID=CB291054; Name=CB291054; organism=Citrus sinensis; type=EST; length=793bp
TTTTTTTTTTTTTTTTTGGGGGAAAAATAATTATTTTTCAATGCATTTGT
TCATAATCTTGCTCTCTGGACAGCCATTTCAGCTGTAAGATGGATCACCA
TCTACCCAACGGGCTCATTCTTGTACAACAGATACAGCTCATGAGCCAAT
CAATCACATGGGCATACATCTCACATGGGTTTGTCCCATAAACCACACTC
TTTTTTTCACATTACAAGGAAAATTTAAAAAATTTTTCTTGTACAACAAC
GGGTTAATCAAGAAGGGAAATCCGGGAGGCAATGTCCTGAACTAACCAAT
CAAATCCCTCTAGCAGTCCCTCACCTGTGTAGGCACTGCAACCCACAATT
TTCCAGTGTCGAGTTTTGTCCATGGCTTCCAAGTTCAGAACTTTAACAAT
CTCTGTTGGGGTAAAAACACCATTGATGTCCTGCTTATTTGCTAAAATCA
GTAAGGATGCCCCTGATAGCCTCTCTTCCTTTAAAAGATTGTCTAGTTCC
ATTTTGCAATCATCCAGTCTTCTAAGATCGGAACTATCAACCACCCACAC
CAAACCATCAGTTTGCTCAAAGTAATTCCTCCAATATGATCTTATAGTCC
TTTGGCCTCCTACATCCCATATGTTTAAAGTGTACTTTTGGTAAGTAATG
GTTTTGATATTGAATCCAAGTGTAGGACTGATAACGCTAGTATCTTCTCC
GTTTATCTTCAAAACAATAGTGGTCTTCCCAGAATTATCAAGACCCACCA
TAAGAATGCGCATTTCCTTCTCTTTTTTCTTGATCTTCCTTAT
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