CB291055

Overview
NameCB291055
Unique NameCB291055
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length774
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB291055 vs. ExPASy Swiss-Prot
Match: ARF5_ARATH (Probable ADP-ribosylation factor At2g18390 OS=Arabidopsis thaliana GN=At2g18390 PE=2 SV=1)

HSP 1 Score: 303.523 bits (776), Expect = 8.217e-82
Identity = 149/166 (89.76%), Postives = 155/166 (93.37%), Query Frame = -3
Query:  239 LRVGLDNSGKTTIVLKINGEDTSVISLTLGFNIKTITYQKSTLNIWDVGGQRTIRSYWRNYFEQTDGLVWVVDSSDLRRLDDCKMELANFLKEERLSGASLLILANKQDINGAFTPTEIAKVLTLEAMDKTRHWKIVGCSAYTGEGLLEGFDWLVQDIASRIYLLD 736
            L VGLDNSGKTTIVLKINGEDTSVIS TLGFNIKTI YQK TLNIWDVGGQ+TIRSYWRNYFEQTDGLVWVVDSSDLRRLDDCKMEL N LKEERL+G+SLLILANKQDI GA TP EI KVL LE+MDK+RHWKIVGCSAYTGEGLLEGFDWLVQDIASRIY+LD
Sbjct:   20 LMVGLDNSGKTTIVLKINGEDTSVISPTLGFNIKTIIYQKYTLNIWDVGGQKTIRSYWRNYFEQTDGLVWVVDSSDLRRLDDCKMELDNLLKEERLAGSSLLILANKQDIQGALTPDEIGKVLNLESMDKSRHWKIVGCSAYTGEGLLEGFDWLVQDIASRIYMLD 185          
BLAST of CB291055 vs. ExPASy Swiss-Prot
Match: ARL2_DICDI (ADP-ribosylation factor-like protein 2 OS=Dictyostelium discoideum GN=arl2 PE=3 SV=1)

HSP 1 Score: 222.631 bits (566), Expect = 1.843e-57
Identity = 101/166 (60.84%), Postives = 133/166 (80.12%), Query Frame = -3
Query:  239 LRVGLDNSGKTTIVLKINGEDTSVISLTLGFNIKTITYQKSTLNIWDVGGQRTIRSYWRNYFEQTDGLVWVVDSSDLRRLDDCKMELANFLKEERLSGASLLILANKQDINGAFTPTEIAKVLTLEAMDKTRHWKIVGCSAYTGEGLLEGFDWLVQDIASRIYLLD 736
            L +GLDN+GKTTI+ K NGED S IS TLGFNI+T+ Y++  LNIWD+GGQ+T+RSYWRNY+E+ D ++WV+DSSD+RR+DDCK EL   L+EE+ +GAS L+ ANKQD++GA T  EI+K L LE ++ T HW+I+ CSA TG GL EG DW+V+DI SR ++LD
Sbjct:   20 LMLGLDNAGKTTILKKFNGEDISTISPTLGFNIQTLMYKEYKLNIWDIGGQKTLRSYWRNYYEENDAVIWVIDSSDIRRIDDCKFELKKLLEEEKFAGASFLVFANKQDLDGAMTSEEISKYLDLEQLN-THHWEIMSCSAVTGLGLEEGIDWVVKDIVSRCFVLD 184          
BLAST of CB291055 vs. ExPASy Swiss-Prot
Match: ARL2_BOVIN (ADP-ribosylation factor-like protein 2 OS=Bos taurus GN=ARL2 PE=2 SV=1)

HSP 1 Score: 213.386 bits (542), Expect = 1.118e-54
Identity = 101/166 (60.84%), Postives = 129/166 (77.71%), Query Frame = -3
Query:  239 LRVGLDNSGKTTIVLKINGEDTSVISLTLGFNIKTITYQKSTLNIWDVGGQRTIRSYWRNYFEQTDGLVWVVDSSDLRRLDDCKMELANFLKEERLSGASLLILANKQDINGAFTPTEIAKVLTLEAMDKTRHWKIVGCSAYTGEGLLEGFDWLVQDIASRIYLLD 736
            L +GLDN+GKTTI+ K NGED   IS TLGFNIKT+ ++   LNIWDVGGQ+++RSYWRNYFE TDGL+WVVDS+D +R+ DC+ EL N L EERL+GA+LLI ANKQD+ GA +   I + L L+++ ++ HW I GCSA TGE LL G DWL+ DI+SRI++ D
Sbjct:   20 LMLGLDNAGKTTILKKFNGEDIDTISPTLGFNIKTLEHRGFKLNIWDVGGQKSLRSYWRNYFESTDGLIWVVDSADRQRMQDCQRELQNLLVEERLAGATLLIFANKQDLPGALSSNAIREALELDSI-RSHHWCIQGCSAVTGENLLPGIDWLLDDISSRIFMAD 184          
BLAST of CB291055 vs. ExPASy Swiss-Prot
Match: ARL2_HUMAN (ADP-ribosylation factor-like protein 2 OS=Homo sapiens GN=ARL2 PE=1 SV=4)

HSP 1 Score: 211.846 bits (538), Expect = 3.254e-54
Identity = 101/166 (60.84%), Postives = 129/166 (77.71%), Query Frame = -3
Query:  239 LRVGLDNSGKTTIVLKINGEDTSVISLTLGFNIKTITYQKSTLNIWDVGGQRTIRSYWRNYFEQTDGLVWVVDSSDLRRLDDCKMELANFLKEERLSGASLLILANKQDINGAFTPTEIAKVLTLEAMDKTRHWKIVGCSAYTGEGLLEGFDWLVQDIASRIYLLD 736
            L +GLDN+GKTTI+ K NGED   IS TLGFNIKT+ ++   LNIWDVGGQ+++RSYWRNYFE TDGL+WVVDS+D +R+ DC+ EL + L EERL+GA+LLI ANKQD+ GA +   I +VL L+++ ++ HW I GCSA TGE LL G DWL+ DI+SRI+  D
Sbjct:   20 LMLGLDNAGKTTILKKFNGEDIDTISPTLGFNIKTLEHRGFKLNIWDVGGQKSLRSYWRNYFESTDGLIWVVDSADRQRMQDCQRELQSLLVEERLAGATLLIFANKQDLPGALSSNAIREVLELDSI-RSHHWCIQGCSAVTGENLLPGIDWLLDDISSRIFTAD 184          
BLAST of CB291055 vs. ExPASy Swiss-Prot
Match: ARL2_RAT (ADP-ribosylation factor-like protein 2 OS=Rattus norvegicus GN=Arl2 PE=2 SV=1)

HSP 1 Score: 211.075 bits (536), Expect = 5.550e-54
Identity = 99/166 (59.64%), Postives = 129/166 (77.71%), Query Frame = -3
Query:  239 LRVGLDNSGKTTIVLKINGEDTSVISLTLGFNIKTITYQKSTLNIWDVGGQRTIRSYWRNYFEQTDGLVWVVDSSDLRRLDDCKMELANFLKEERLSGASLLILANKQDINGAFTPTEIAKVLTLEAMDKTRHWKIVGCSAYTGEGLLEGFDWLVQDIASRIYLLD 736
            L +GLDN+GKTTI+ K NGED   IS TLGFNIKT+ ++   LNIWDVGGQ+++RSYWRNYFE TDGL+WVVDS+D +R+ DC+ EL + L EERL+GA+LLI ANKQD+ GA +   I + L L+++ ++ HW+I GCSA TGE LL G DWL+ DI+SR++  D
Sbjct:   20 LMLGLDNAGKTTILKKFNGEDVDTISPTLGFNIKTLEHRGFKLNIWDVGGQKSLRSYWRNYFESTDGLIWVVDSADRQRMQDCQRELQSLLVEERLAGATLLIFANKQDLPGALSCNAIQEALELDSI-RSHHWRIQGCSAVTGEDLLPGIDWLLDDISSRVFTAD 184          
BLAST of CB291055 vs. ExPASy Swiss-Prot
Match: ARL2_MOUSE (ADP-ribosylation factor-like protein 2 OS=Mus musculus GN=Arl2 PE=1 SV=1)

HSP 1 Score: 211.075 bits (536), Expect = 5.550e-54
Identity = 99/166 (59.64%), Postives = 129/166 (77.71%), Query Frame = -3
Query:  239 LRVGLDNSGKTTIVLKINGEDTSVISLTLGFNIKTITYQKSTLNIWDVGGQRTIRSYWRNYFEQTDGLVWVVDSSDLRRLDDCKMELANFLKEERLSGASLLILANKQDINGAFTPTEIAKVLTLEAMDKTRHWKIVGCSAYTGEGLLEGFDWLVQDIASRIYLLD 736
            L +GLDN+GKTTI+ K NGED   IS TLGFNIKT+ ++   LNIWDVGGQ+++RSYWRNYFE TDGL+WVVDS+D +R+ DC+ EL + L EERL+GA+LLI ANKQD+ GA +   I + L L+++ ++ HW+I GCSA TGE LL G DWL+ DI+SR++  D
Sbjct:   20 LMLGLDNAGKTTILKKFNGEDVDTISPTLGFNIKTLEHRGFKLNIWDVGGQKSLRSYWRNYFESTDGLIWVVDSADRQRMQDCQRELQSLLVEERLAGATLLIFANKQDLPGALSCNAIQEALELDSI-RSHHWRIQGCSAVTGEDLLPGIDWLLDDISSRVFTAD 184          
BLAST of CB291055 vs. ExPASy Swiss-Prot
Match: ARL2_DROME (ADP-ribosylation factor-like protein 2 OS=Drosophila melanogaster GN=Arf84F PE=2 SV=2)

HSP 1 Score: 203.756 bits (517), Expect = 8.861e-52
Identity = 99/166 (59.64%), Postives = 123/166 (74.10%), Query Frame = -3
Query:  239 LRVGLDNSGKTTIVLKINGEDTSVISLTLGFNIKTITYQKSTLNIWDVGGQRTIRSYWRNYFEQTDGLVWVVDSSDLRRLDDCKMELANFLKEERLSGASLLILANKQDINGAFTPTEIAKVLTLEAMDKTRHWKIVGCSAYTGEGLLEGFDWLVQDIASRIYLLD 736
            L +GLDN+GKTTI+ + NGE    IS TLGFNIKT+ +   TLN+WDVGGQ+++RSYWRNYFE TDGLVWVVDS+D  RL+ C  EL   L+EERL+GA+LL+L NKQD+ GA +  EI ++L LE +  T HW + G SA TGE LL   DWL+ DIA RI+ LD
Sbjct:   20 LLLGLDNAGKTTILKRFNGEPIDTISPTLGFNIKTLEHNGYTLNMWDVGGQKSLRSYWRNYFESTDGLVWVVDSADRMRLESCGQELQVLLQEERLAGATLLVLCNKQDLPGALSSNEIKEILHLEDI-TTHHWLVAGVSAVTGEKLLSSMDWLIADIAKRIFTLD 184          
BLAST of CB291055 vs. ExPASy Swiss-Prot
Match: ARL2_CAEBR (ADP-ribosylation factor-like protein 2 OS=Caenorhabditis briggsae GN=evl-20.1 PE=3 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 5.376e-49
Identity = 93/166 (56.02%), Postives = 120/166 (72.29%), Query Frame = -3
Query:  239 LRVGLDNSGKTTIVLKINGEDTSVISLTLGFNIKTITYQKSTLNIWDVGGQRTIRSYWRNYFEQTDGLVWVVDSSDLRRLDDCKMELANFLKEERLSGASLLILANKQDINGAFTPTEIAKVLTLEAMDKTRHWKIVGCSAYTGEGLLEGFDWLVQDIASRIYLLD 736
            L +GLDN+GKTT++ K   E T  I  TLGF+IKT+ ++   LN+WDVGGQ+++RSYW+NYFE TD L+WVVDSSD  RL  C  EL   L+EERLSGASLL+LANK D+ GA     IA+VL L+++ KT HWKI  C A +GE L++   WL  D+ SRI++LD
Sbjct:   20 LILGLDNAGKTTLMKKFLDEPTDTIEPTLGFDIKTVHFKDFQLNLWDVGGQKSLRSYWKNYFESTDALIWVVDSSDRERLTQCSEELKKLLQEERLSGASLLVLANKSDLPGAIDVNSIAQVLELQSI-KTHHWKIFSCCALSGERLVQAMTWLCDDVGSRIFILD 184          
BLAST of CB291055 vs. ExPASy Swiss-Prot
Match: ARL2_CAEEL (ADP-ribosylation factor-like protein 2 OS=Caenorhabditis elegans GN=evl-20 PE=2 SV=2)

HSP 1 Score: 186.808 bits (473), Expect = 1.121e-46
Identity = 89/166 (53.61%), Postives = 118/166 (71.08%), Query Frame = -3
Query:  239 LRVGLDNSGKTTIVLKINGEDTSVISLTLGFNIKTITYQKSTLNIWDVGGQRTIRSYWRNYFEQTDGLVWVVDSSDLRRLDDCKMELANFLKEERLSGASLLILANKQDINGAFTPTEIAKVLTLEAMDKTRHWKIVGCSAYTGEGLLEGFDWLVQDIASRIYLLD 736
            L +GLDN+GKTT++ K   E T  I  TLGF+IKT+ ++   LN+WDVGGQ+++RSYW+NYFE TD L+WVVDSSD  RL  C  EL   L EERL+GASLL+LANK D+ GA     IA+VL L ++ K+ HWKI  C A +G+ L++   WL  D+ SR+++LD
Sbjct:   20 LILGLDNAGKTTLMKKFLDEPTDTIEPTLGFDIKTVHFKDFQLNLWDVGGQKSLRSYWKNYFESTDALIWVVDSSDRERLLQCSEELKKLLGEERLAGASLLVLANKSDLPGAIDVNSIAQVLDLHSI-KSHHWKIFSCCALSGDRLVQAMTWLCDDVGSRLFILD 184          
BLAST of CB291055 vs. ExPASy Swiss-Prot
Match: ARL3_TAEGU (ADP-ribosylation factor-like protein 3 OS=Taeniopygia guttata GN=ARL3 PE=2 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 2.957e-39
Identity = 78/161 (48.45%), Postives = 115/161 (71.43%), Query Frame = -3
Query:  254 LRVGLDNSGKTTIVLKINGEDTSVISLTLGFNIKTITYQKSTLNIWDVGGQRTIRSYWRNYFEQTDGLVWVVDSSDLRRLDDCKMELANFLKEERLSGASLLILANKQDINGAFTPTEIAKVLTLEAMDKTRHWKIVGCSAYTGEGLLEGFDWLVQDIASR 736
            L +GLDN+GKTT++ ++  ED S I+ T GFNIK++  Q   LN+WD+GGQR IR YWRNYFE TD L++V+DS+D +R ++   ELA  L EE+LSG  +LI ANKQD+  A   +EIA+ L L  + + R W+I  CSA +GEG+ +G +W+ ++++++
Sbjct:   21 LLLGLDNAGKTTLLKQLASEDISHITPTQGFNIKSVQSQGFKLNVWDIGGQRKIRPYWRNYFENTDILIYVIDSADRKRFEETGQELAELLDEEKLSGVPVLIFANKQDLLTAAPASEIAEGLNLHTI-RDRVWQIQSCSALSGEGVQDGMNWVCKNVSTK 180          
The following BLAST results are available for this feature:
BLAST of CB291055 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 217
Match NameE-valueIdentityDescription
ARF5_ARATH8.217e-8289.76Probable ADP-ribosylation factor At2g18390 OS=Arab... [more]
ARL2_DICDI1.843e-5760.84ADP-ribosylation factor-like protein 2 OS=Dictyost... [more]
ARL2_BOVIN1.118e-5460.84ADP-ribosylation factor-like protein 2 OS=Bos taur... [more]
ARL2_HUMAN3.254e-5460.84ADP-ribosylation factor-like protein 2 OS=Homo sap... [more]
ARL2_RAT5.550e-5459.64ADP-ribosylation factor-like protein 2 OS=Rattus n... [more]
ARL2_MOUSE5.550e-5459.64ADP-ribosylation factor-like protein 2 OS=Mus musc... [more]
ARL2_DROME8.861e-5259.64ADP-ribosylation factor-like protein 2 OS=Drosophi... [more]
ARL2_CAEBR5.376e-4956.02ADP-ribosylation factor-like protein 2 OS=Caenorha... [more]
ARL2_CAEEL1.121e-4653.61ADP-ribosylation factor-like protein 2 OS=Caenorha... [more]
ARL3_TAEGU2.957e-3948.45ADP-ribosylation factor-like protein 3 OS=Taeniopy... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_02bb09_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_02bb09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB291055 ID=CB291055; Name=CB291055; organism=Citrus sinensis; type=EST; length=774bp
GGGGAAAAATAATTACTTTTCAATGCATTTGTTCATAATCTTGCTCTCTG
GACAGCCATTTCAGCTGTAAGATGGATCACCATCTACCCAACGGGCTCAT
TCTTGTACAACAGATACAGCTCATGAGCCAATCAATCACATGGGCATACA
TCTCACATGGTTTTGTCCCATAAACCACACTCTTTTTTTCACATTACAAG
GAAAATTTAAAAAATTTTTCTTGTACAACAACGGGTTAATCAAGAAGGTA
GATCCGGGAGGCAATGTCCTGAACTAACCAATCAAATCCCTCTAGCAGTC
CCTCACCTGTGTAGGCACTGCAACCCACAATTTTCCAGTGTCGAGTTTTG
TCCATGGCTTCCAAGGTCAGAACTTTAGCAATCTCTGTTGGGGTAAAAGC
ACCATTGATGTCCTGCTTATTTGCTAAAATCAATAAGGATGCCCCTGATA
GCCTCTCTTCCTTTAAAAAATTGGCTAATTCCATTTTGCAATCATCCAGT
CTTCTAAGATCGGAACTATCAACCACCCACACCAAACCATCAGTTTGCTC
AAAGTAATTCCTCCAATATGATCTTATAGTCCTTTGGCCTCCTACATCCC
ATATGTTTAAAGTGGACTTTTGGTAAGTAATGGTTTTGATATTGAATCCC
AGGGTAAGACTGATAACGCTAGTATCTTCTCCGTTTATCTTCAAAACAAT
AGTGGTCTTCCCAGAATTATCAAGACCCACCCTAAGAATGCGCATTTCCT
TCTCTTTTTTCTTGATCTTCCTTA
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