CB291063

Overview
NameCB291063
Unique NameCB291063
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length921
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB291063 vs. ExPASy Swiss-Prot
Match: ATPO_IPOBA (ATP synthase subunit O, mitochondrial OS=Ipomoea batatas PE=1 SV=1)

HSP 1 Score: 230.72 bits (587), Expect = 8.933e-60
Identity = 118/189 (62.43%), Postives = 144/189 (76.19%), Query Frame = -2
Query:  354 VKVPLALFGGSGNYASALYIAAVKTNALEKVESEILDLVEASKKADTYFQFTKDLSVPAETRVNAINEICTQAKFSDVTKHFLVVLAENGRLRNLDTIAKRFVELTMAHKGEVKVTVTSVIXXXXXXXXXXXXXXXXXLXXXXXXXXXXXVDPSILGGLVVEFGQKVFDMSIKSRARQMERFLREPIHF 920
            +KVPL ++G SGNYASALY+AAVK+N LEKVESE+ DLVEASKK+ T+ QF +D SVP +TRVNAI EIC QAKF D T++FL++LAENGRL+++D I KRF ELTMAH+GEVK TVT+VI                 +           +DP+ILGGLVVEFGQKVFDMSI++RARQMERFLREP++F
Sbjct:   56 IKVPLTMYGVSGNYASALYLAAVKSNTLEKVESELYDLVEASKKSPTFSQFMRDPSVPVDTRVNAIKEICAQAKFGDTTQNFLLILAENGRLKHIDRIVKRFKELTMAHRGEVKATVTTVIPLPADEEKELKATLQEMVGQGKSVQIEQKIDPTILGGLVVEFGQKVFDMSIRTRARQMERFLREPLNF 244          
BLAST of CB291063 vs. ExPASy Swiss-Prot
Match: ATPO_ARATH (ATP synthase subunit O, mitochondrial OS=Arabidopsis thaliana GN=At5g13450 PE=1 SV=2)

HSP 1 Score: 193.741 bits (491), Expect = 1.210e-48
Identity = 101/192 (52.60%), Postives = 134/192 (69.79%), Query Frame = -2
Query:  345 VKVPLALFGGSGNYASALYIAAVKTNALEKVESEILDLVEASKKADTYFQFTKDLSVPAETRVNAINEICTQAKFSDVTKHFLVVLAENGRLRNLDTIAKRFVELTMAHKGEVKVTVTSVIXXXXXXXXXXXXXXXXXLXXXXXXXXXXXVDPSILGGLVVEFGQKVFDMSIKSRARQMERFLREPIHFGTL 920
            VKVP+AL G +GN+AS LYIAAVK N+LEK+E+++ +++EA K A  + QFTKD SVP  TR+ AI + C QAKF++ TK+FL +LAENG+L+NLD I K+F++LT AH+G+VKV VT+VI                 +           +DPSI GGL+VEF QKV DMSI++RA+QMER LREP+ F  L
Sbjct:   47 VKVPIALVGENGNFASWLYIAAVKMNSLEKIETDLSEMIEAMKTAPIFAQFTKDPSVPRGTRLAAIRDACDQAKFAEPTKNFLSLLAENGKLKNLDAIVKKFMQLTNAHRGDVKVLVTTVIPLPPAEEKELTETLQEIIGAGKKITVEQKIDPSIYGGLIVEFQQKVLDMSIRTRAQQMERLLREPVDFNNL 238          
BLAST of CB291063 vs. ExPASy Swiss-Prot
Match: ATPO_PONAB (ATP synthase subunit O, mitochondrial OS=Pongo abelii GN=ATP5O PE=2 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 1.141e-22
Identity = 63/185 (34.05%), Postives = 96/185 (51.89%), Query Frame = -2
Query:  366 VKVPLALFGGSGNYASALYIAAVKTNALEKVESEILDLVEASKKADTYFQFTKDLSVPAETRVNAINEICTQAKFSDVTKHFLVVLAENGRLRNLDTIAKRFVELTMAHKGEVKVTVTSVIXXXXXXXXXXXXXXXXXLXXXXXXXXXXXVDPSILGGLVVEFGQKVFDMSIKSRARQMERFLRE 920
            V+ P+ ++G  G YA+ALY AA K N LE+VE E+L + +  K+            V    +V ++N+I  + +FS +T + + +LAENGRL N   +   F  +  AH+GEV  TVTS                   L            DPSILGG++V  G+K  DMS+K++ +++ R +RE
Sbjct:   28 VRPPVQVYGIEGRYATALYSAASKQNKLEQVEKELLRVAQILKEPKVAAPVLNPY-VKRSIKVKSLNDITAKERFSPLTTNLINLLAENGRLSNTQGVVSAFSTMMSAHRGEVPCTVTSASPLEEATLSELKTVLKSFLSQGQVLKLEAKTDPSILGGMIVRIGEKYVDMSVKTKIQKLSRAMRE 211          
BLAST of CB291063 vs. ExPASy Swiss-Prot
Match: ATPO_HUMAN (ATP synthase subunit O, mitochondrial OS=Homo sapiens GN=ATP5O PE=1 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 4.334e-22
Identity = 62/185 (33.51%), Postives = 95/185 (51.35%), Query Frame = -2
Query:  366 VKVPLALFGGSGNYASALYIAAVKTNALEKVESEILDLVEASKKADTYFQFTKDLSVPAETRVNAINEICTQAKFSDVTKHFLVVLAENGRLRNLDTIAKRFVELTMAHKGEVKVTVTSVIXXXXXXXXXXXXXXXXXLXXXXXXXXXXXVDPSILGGLVVEFGQKVFDMSIKSRARQMERFLRE 920
            V+ P+ ++G  G YA+ALY AA K N LE+VE E+L + +  K+            V    +V ++N+I  + +FS +T + + +LAENGRL N   +   F  +   H+GEV  TVTS                   L            DPSILGG++V  G+K  DMS+K++ +++ R +RE
Sbjct:   28 VRPPVQVYGIEGRYATALYSAASKQNKLEQVEKELLRVAQILKEPKVAASVLNPY-VKRSIKVKSLNDITAKERFSPLTTNLINLLAENGRLSNTQGVVSAFSTMMSVHRGEVPCTVTSASPLEEATLSELKTVLKSFLSQGQVLKLEAKTDPSILGGMIVRIGEKYVDMSVKTKIQKLGRAMRE 211          
BLAST of CB291063 vs. ExPASy Swiss-Prot
Match: ATPO_RHIFE (ATP synthase subunit O, mitochondrial OS=Rhinolophus ferrumequinum GN=ATP5O PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.151e-21
Identity = 58/185 (31.35%), Postives = 95/185 (51.35%), Query Frame = -2
Query:  366 VKVPLALFGGSGNYASALYIAAVKTNALEKVESEILDLVEASKKADTYFQFTKDLSVPAETRVNAINEICTQAKFSDVTKHFLVVLAENGRLRNLDTIAKRFVELTMAHKGEVKVTVTSVIXXXXXXXXXXXXXXXXXLXXXXXXXXXXXVDPSILGGLVVEFGQKVFDMSIKSRARQMERFLRE 920
            V+ P+ ++G  G YA+ALY AA K N LE+VE E+L + +  K+            +    +V ++N++ T+ KFS +T + + +LAENGRL N   +   F  +   H+GEV  +VT+                   L            DPSI+GG+++  G+K  DMS K++ +++ R +RE
Sbjct:   28 VRPPVQIYGIEGRYATALYSAASKQNKLEQVEKELLRVAQLLKEPKMAASIMNPY-IKRSIKVKSLNDMTTKEKFSPLTSNLMNLLAENGRLNNTPGVISAFSTIMSVHRGEVPCSVTTASPLDEATLSELKTVLQSFLSKNQILKLEVKTDPSIMGGMIIRIGEKYVDMSAKTKIQKLSRVMRE 211          
BLAST of CB291063 vs. ExPASy Swiss-Prot
Match: ATPO_BOVIN (ATP synthase subunit O, mitochondrial OS=Bos taurus GN=ATP5O PE=1 SV=2)

HSP 1 Score: 100.908 bits (250), Expect = 1.068e-20
Identity = 59/185 (31.89%), Postives = 95/185 (51.35%), Query Frame = -2
Query:  366 VKVPLALFGGSGNYASALYIAAVKTNALEKVESEILDLVEASKKADTYFQFTKDLSVPAETRVNAINEICTQAKFSDVTKHFLVVLAENGRLRNLDTIAKRFVELTMAHKGEVKVTVTSVIXXXXXXXXXXXXXXXXXLXXXXXXXXXXXVDPSILGGLVVEFGQKVFDMSIKSRARQMERFLRE 920
            V+ P+ ++G  G YA+ALY AA K N LE+VE E+L + +  K+            V    +V +++++  + KFS +T + + +LAENGRL N   +   F  +   H+GEV  TVT+                   L           +DPSI+GG++V  G+K  DMS K++ +++ R +RE
Sbjct:   28 VRPPVQIYGIEGRYATALYSAASKQNKLEQVEKELLRVGQILKEPKMAASLLNPY-VKRSVKVKSLSDMTAKEKFSPLTSNLINLLAENGRLTNTPAVISAFSTMMSVHRGEVPCTVTTASALDEATLTELKTVLKSFLSKGQVLKLEVKIDPSIMGGMIVRIGEKYVDMSAKTKIQKLSRAMRE 211          
BLAST of CB291063 vs. ExPASy Swiss-Prot
Match: ATPO_PIG (ATP synthase subunit O, mitochondrial OS=Sus scrofa GN=ATP5O PE=1 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 6.920e-20
Identity = 58/185 (31.35%), Postives = 95/185 (51.35%), Query Frame = -2
Query:  366 VKVPLALFGGSGNYASALYIAAVKTNALEKVESEILDLVEASKKADTYFQFTKDLSVPAETRVNAINEICTQAKFSDVTKHFLVVLAENGRLRNLDTIAKRFVELTMAHKGEVKVTVTSVIXXXXXXXXXXXXXXXXXLXXXXXXXXXXXVDPSILGGLVVEFGQKVFDMSIKSRARQMERFLRE 920
            V+ P+ ++G  G YA+ALY AA K N LE+VE E+L + +  K+            V    +V +++++  + KFS +T + + +LAENGRL +   +   F  +   H+GEV  +VT+                   L           VDPSI+GG++V  G+K  DMS K++ +++ R +RE
Sbjct:   28 VRPPVQIYGIEGRYATALYSAASKQNKLEQVEKELLRVAQILKEPKVAASIMNPY-VKRSVKVKSLSDMTAKEKFSPLTSNLINLLAENGRLSSTPGVISAFSTMMSVHRGEVPCSVTTASPLDEATLTELKTVLKSFLSKGQILKLEVKVDPSIMGGMIVRIGEKYVDMSAKTKIQKLSRAMRE 211          
BLAST of CB291063 vs. ExPASy Swiss-Prot
Match: ATPO_CALJA (ATP synthase subunit O, mitochondrial OS=Callithrix jacchus GN=ATP5O PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 6.920e-20
Identity = 58/187 (31.02%), Postives = 94/187 (50.27%), Query Frame = -2
Query:  360 VKVPLALFGGSGNYASALYIAAVKTNALEKVESEILDLVEASKKADTYFQFTKDLSVPAETRVNAINEICTQAKFSDVTKHFLVVLAENGRLRNLDTIAKRFVELTMAHKGEVKVTVTSVIXXXXXXXXXXXXXXXXXLXXXXXXXXXXXVDPSILGGLVVEFGQKVFDMSIKSRARQMERFLREPI 920
            V+ P+ ++G  G YA+ALY AA K   LE+VE E+L + +  K+            V    +V ++++I  + +FS +T + + +LAENGRL N   +   F  +   H+GEV  TVT+                   L            DPSI+GG++V  G+K  DMS K++ +++ + +RE I
Sbjct:   28 VRPPVQVYGVEGRYATALYSAASKQKKLEQVEKELLRVAQILKEPKVAASVLNPY-VKHSIKVKSLSDIIAKERFSPLTTNLINLLAENGRLSNTQGVVSAFSTMMSVHRGEVPCTVTTASPLEEATLSELKTVLKSFLSQGQILKLEVKTDPSIMGGMIVRIGEKYVDMSAKTKIQKLSKAMREVI 213          
BLAST of CB291063 vs. ExPASy Swiss-Prot
Match: ATPO_MOUSE (ATP synthase subunit O, mitochondrial OS=Mus musculus GN=Atp5o PE=1 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 9.037e-20
Identity = 59/185 (31.89%), Postives = 92/185 (49.73%), Query Frame = -2
Query:  366 VKVPLALFGGSGNYASALYIAAVKTNALEKVESEILDLVEASKKADTYFQFTKDLSVPAETRVNAINEICTQAKFSDVTKHFLVVLAENGRLRNLDTIAKRFVELTMAHKGEVKVTVTSVIXXXXXXXXXXXXXXXXXLXXXXXXXXXXXVDPSILGGLVVEFGQKVFDMSIKSRARQMERFLRE 920
            V+ P+ ++G  G YA+ALY AA K   L++VE E+L + +  K             +    +V ++N+I  + KFS +T + + +LAENGRL N   I   F  +   H+GEV  TVT+                   L            DPSI+GG++V  G+K  DMS KS+ +++ + +RE
Sbjct:   28 VRPPVQVYGIEGRYATALYSAASKEKKLDQVEKELLRVGQLLKDPKVSLAVLNPY-IKRTVKVKSLNDITKREKFSPLTANLMNLLAENGRLGNTQGIISAFSTIMSVHRGEVPCTVTTASPLDDAVLSELKTVLKSFLSPNQILKLEIKTDPSIMGGMIVRIGEKYVDMSAKSKIQKLSKAMRE 211          
BLAST of CB291063 vs. ExPASy Swiss-Prot
Match: ATPO_CALMO (ATP synthase subunit O, mitochondrial OS=Callicebus moloch GN=ATP5O PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 9.037e-20
Identity = 57/187 (30.48%), Postives = 94/187 (50.27%), Query Frame = -2
Query:  360 VKVPLALFGGSGNYASALYIAAVKTNALEKVESEILDLVEASKKADTYFQFTKDLSVPAETRVNAINEICTQAKFSDVTKHFLVVLAENGRLRNLDTIAKRFVELTMAHKGEVKVTVTSVIXXXXXXXXXXXXXXXXXLXXXXXXXXXXXVDPSILGGLVVEFGQKVFDMSIKSRARQMERFLREPI 920
            V+ P+ ++G  G YA+ALY AA K   LE+VE E+L + +  K+            V    +V ++++I  + +FS +T + + +LAENGRL N   +   F  +   H+GE+  TVT+                   L            DPSI+GG++V  G+K  DMS K++ +++ + +RE I
Sbjct:   28 VRPPVQVYGIEGRYATALYSAASKQKKLEQVEKELLRVAQILKEPKVAASVLNPY-VKHSVKVKSLSDIIAKERFSPLTTNLINLLAENGRLSNTQGVVSAFSTMMSVHRGEIPCTVTTASPLEETTLSELKTVLKSFLSQGQILKLEVKTDPSIMGGMIVRIGEKYVDMSAKTKIQKLSKAMREVI 213          
The following BLAST results are available for this feature:
BLAST of CB291063 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 19
Match NameE-valueIdentityDescription
ATPO_IPOBA8.933e-6062.43ATP synthase subunit O, mitochondrial OS=Ipomoea b... [more]
ATPO_ARATH1.210e-4852.60ATP synthase subunit O, mitochondrial OS=Arabidops... [more]
ATPO_PONAB1.141e-2234.05ATP synthase subunit O, mitochondrial OS=Pongo abe... [more]
ATPO_HUMAN4.334e-2233.51ATP synthase subunit O, mitochondrial OS=Homo sapi... [more]
ATPO_RHIFE2.151e-2131.35ATP synthase subunit O, mitochondrial OS=Rhinoloph... [more]
ATPO_BOVIN1.068e-2031.89ATP synthase subunit O, mitochondrial OS=Bos tauru... [more]
ATPO_PIG6.920e-2031.35ATP synthase subunit O, mitochondrial OS=Sus scrof... [more]
ATPO_CALJA6.920e-2031.02ATP synthase subunit O, mitochondrial OS=Callithri... [more]
ATPO_MOUSE9.037e-2031.89ATP synthase subunit O, mitochondrial OS=Mus muscu... [more]
ATPO_CALMO9.037e-2030.48ATP synthase subunit O, mitochondrial OS=Callicebu... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_02bc02_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_02bc02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB291063 ID=CB291063; Name=CB291063; organism=Citrus sinensis; type=EST; length=921bp
TTTTTTTTTTTTTTTTGTTCTCAAAGAGCTTTTGTCCTTAAGAACCGTAT
CATGTGCAGGACCGAGTAATTATTTGAACACACAAATTATACCCTTAAAA
GATAATGGTCCGAACCGAAACCCAAACAAAAAATGTTGCCGTCCATCAGA
ACCATTTGCCATGAAAGCAAAGTGATCAAGATGTGAATTTTATTTTGCCA
ATGATTCAATTCATTCAGAAATGGCGGAGCACAAGCAAACAGCACCAAAC
AAAAGCATGAATGGTTCTTTTACTTCTTGGAGCGTTCCAGTTGTTGCATA
ATCATCTTGAAAATTTGGGCCCTGGGGCTGTGGCAGCCTTTTTAGAGGGT
GCCAAAATGAATGGGCTCACGTAGGAACCTCTCCATCTGCCGCGCCCTAG
ACTTAATGGACATGTCAAACACCTTTTGCCCAAACTCTACTACGAGCCCA
CCAAGAATGCTAGGATCAACCTTCTGTTCAACCTTGACTTTCTTCCCTTG
GCCAAGTGTCTCTTGCAGTGTCTCTTTCAACTCTTTCTCTTCTTCTGGGG
GAAGTGGAATAACGGATGTAACAGTAACTTTTACTTCGCCCTTGTGTGCC
ATGGTTAACTCCACAAACCTCTTAGCGATGGTGTCTAAGTTTCTAAGCCT
CCCATTCTCAGCCAAAACAACCAAGAAGTGCTTCGTAACATCTGAAAATT
TAGCCTGAGTACAGATTTCGTTAATGGCATTAACTCTCGTCTCTGCAGGC
ACAGACAAGTCCTTTGTGAACTGAAAATATGTATCAGCCTTCTTTGAAGC
CTCAACAAGGTCAAGAATCTCAGACTCAACCTTCTCCAGTGCGTTAGTTT
TCACTGCCGCAATGTACAGAGCAGAAGCATAATTTCCTGAACCTCCAAAC
AAAGCCAGGGGCACCTTAACT
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