CB291112

Overview
NameCB291112
Unique NameCB291112
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length745
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB291112 vs. ExPASy Swiss-Prot
Match: THI4_CITSI (Thiazole biosynthetic enzyme, chloroplastic OS=Citrus sinensis GN=THI1 PE=2 SV=1)

HSP 1 Score: 321.627 bits (823), Expect = 2.763e-87
Identity = 165/179 (92.18%), Postives = 165/179 (92.18%), Query Frame = -2
Query:  208 KHAALFPSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDPQSCMDPNVMEAKVVVSFCGHDGPFGAPGVKRLKSFGMIEEVPGMKALAMNFAEDVIVRLPREVVPGMIVPGMEVAEIDGAPRMGPPFGAMMISGQKAAHLALKSLGHPNALAGTYVGGVPPELIL 744
            KHAALF STIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHD QSCMDPNVMEAKVVVS CGHDGPFGA GVKRLKS GMIEEVPGMKAL MN AED IVRL REVVPGMIV GMEVAEIDGAPRMGP FGAMMISGQKAAHLALKSLG PNAL GTYVGGV PELIL
Sbjct:  167 KHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLKSIGMIEEVPGMKALDMNSAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSLGQPNALDGTYVGGVHPELIL 345          
BLAST of CB291112 vs. ExPASy Swiss-Prot
Match: THI4_ALNGL (Thiazole biosynthetic enzyme, chloroplastic OS=Alnus glutinosa GN=THI4 PE=2 SV=1)

HSP 1 Score: 310.457 bits (794), Expect = 6.370e-84
Identity = 157/179 (87.71%), Postives = 163/179 (91.06%), Query Frame = -2
Query:  208 KHAALFPSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDPQSCMDPNVMEAKVVVSFCGHDGPFGAPGVKRLKSFGMIEEVPGMKALAMNFAEDVIVRLPREVVPGMIVPGMEVAEIDGAPRMGPPFGAMMISGQKAAHLALKSLGHPNALAGTYVGGVPPELIL 744
            KHAALF STIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHD QSCMDPNVMEAKVVVS CGHDGPFGA GVK L+S GMI+ VPGMKAL MN AED IVRL RE+VPGMIV GMEVAEIDGAPRMGP FGAMMISGQKAAHLALK+LG PNAL G+YVGG+ PELIL
Sbjct:  163 KHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKSLRSIGMIDTVPGMKALDMNVAEDAIVRLTREIVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKALGLPNALDGSYVGGIHPELIL 341          
BLAST of CB291112 vs. ExPASy Swiss-Prot
Match: THI4_ARATH (Thiazole biosynthetic enzyme, chloroplastic OS=Arabidopsis thaliana GN=THI1 PE=1 SV=1)

HSP 1 Score: 295.819 bits (756), Expect = 1.624e-79
Identity = 150/179 (83.80%), Postives = 157/179 (87.71%), Query Frame = -2
Query:  208 KHAALFPSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDPQSCMDPNVMEAKVVVSFCGHDGPFGAPGVKRLKSFGMIEEVPGMKALAMNFAEDVIVRLPREVVPGMIVPGMEVAEIDGAPRMGPPFGAMMISGQKAAHLALKSLGHPNALAGTYVGGVPPELIL 744
            KHAALF STIMSKLLARPNVKLFNAVAAEDLIVKG RVGGVVTNWALV+ NH  QSCMDPNVMEAK+VVS CGHDGPFGA GVKRLKS GMI+ VPGMKAL MN AED IVRL REVVPGMIV GMEVAEIDGAPRMGP FGAMMISGQKA  LALK+LG PNA+ GT VG + PEL+L
Sbjct:  160 KHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGNRVGGVVTNWALVAQNHHTQSCMDPNVMEAKIVVSSCGHDGPFGATGVKRLKSIGMIDHVPGMKALDMNTAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAGQLALKALGLPNAIDGTLVGNLSPELVL 338          
BLAST of CB291112 vs. ExPASy Swiss-Prot
Match: THI41_MAIZE (Thiazole biosynthetic enzyme 1-1, chloroplastic OS=Zea mays GN=THI1-1 PE=2 SV=1)

HSP 1 Score: 287.73 bits (735), Expect = 4.422e-77
Identity = 147/179 (82.12%), Postives = 155/179 (86.59%), Query Frame = -2
Query:  208 KHAALFPSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDPQSCMDPNVMEAKVVVSFCGHDGPFGAPGVKRLKSFGMIEEVPGMKALAMNFAEDVIVRLPREVVPGMIVPGMEVAEIDGAPRMGPPFGAMMISGQKAAHLALKSLGHPNALAGTYVGGVPPELIL 744
            KHAALF ST+MS LLARPNVKLFNAVA EDLIV+GGRVGGVVTNWALVSMNHD QSCMDPNVMEAKVVVS CGHDGPFGA GVKRL+  GMI  VPGMKAL MN AED IVRL REVVPGMIV GMEVAEIDGAPRMGP FGAMMISGQKAAHLALK+LG PNA+ GT    +  EL++
Sbjct:  166 KHAALFTSTVMSLLLARPNVKLFNAVAVEDLIVRGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLQDIGMISAVPGMKALDMNTAEDEIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKALGRPNAVDGTMSPPLREELMI 344          
BLAST of CB291112 vs. ExPASy Swiss-Prot
Match: THI42_MAIZE (Thiazole biosynthetic enzyme 1-2, chloroplastic OS=Zea mays GN=THI1-2 PE=2 SV=1)

HSP 1 Score: 285.034 bits (728), Expect = 2.866e-76
Identity = 144/168 (85.71%), Postives = 150/168 (89.29%), Query Frame = -2
Query:  241 KHAALFPSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDPQSCMDPNVMEAKVVVSFCGHDGPFGAPGVKRLKSFGMIEEVPGMKALAMNFAEDVIVRLPREVVPGMIVPGMEVAEIDGAPRMGPPFGAMMISGQKAAHLALKSLGHPNALAGT 744
            KHAALF ST+MS+LLARPNVKLFNAVA EDLIV+ GRVGGVVTNWALVSMNHD QSCMDPNVMEAKVVVS CGHDGPFGA GVKRL+  GMI  VPGMKAL MN AED IVRL REVVPGMIV GMEVAEIDGAPRMGP FGAMMISGQKAAHLALK+LG PNA+ GT
Sbjct:  163 KHAALFTSTVMSRLLARPNVKLFNAVAVEDLIVRRGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLQDIGMISAVPGMKALDMNAAEDEIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKALGRPNAVDGT 330          
BLAST of CB291112 vs. ExPASy Swiss-Prot
Match: THI4_FUSOX (Thiazole biosynthetic enzyme, mitochondrial OS=Fusarium oxysporum GN=STI35 PE=2 SV=2)

HSP 1 Score: 197.208 bits (500), Expect = 7.859e-50
Identity = 101/161 (62.73%), Postives = 120/161 (74.53%), Query Frame = -2
Query:  274 KHAALFPSTIMSKLLARPNVKLFNAVAAEDLIVK----GGRVGGVVTNWALVSMNHDPQSCMDPNVMEAKVVVSFCGHDGPFGAPGVKRLKSFGMIEEVPGMKALAMNFAEDVIVRLPREVVPGMIVPGMEVAEIDGAPRMGPPFGAMMISGQKAAHLALK 744
            KHAALF STIMSK+L  PN+KLFNA   EDLI +    G R+ GVVTNW LVSM+HD QSCMDPN + A +++S  GHDGP GA  VKRL S   IE++ GM+ L MN AED IV+  RE+VPG+IV GME++E+DGA RMGP FGAM +SG KAA  ALK
Sbjct:  149 KHAALFTSTIMSKVLQMPNIKLFNATCVEDLITRPSEEGVRIAGVVTNWTLVSMHHDDQSCMDPNTINAPLIISTTGHDGPMGAFCVKRLVSMQRIEKLGGMRGLDMNLAEDAIVKGTREIVPGLIVGGMELSEVDGANRMGPTFGAMALSGLKAAEEALK 309          
BLAST of CB291112 vs. ExPASy Swiss-Prot
Match: THI4_FUSSH (Thiazole biosynthetic enzyme, mitochondrial OS=Fusarium solani subsp. phaseoli GN=STI35 PE=2 SV=1)

HSP 1 Score: 196.823 bits (499), Expect = 1.026e-49
Identity = 102/161 (63.35%), Postives = 120/161 (74.53%), Query Frame = -2
Query:  274 KHAALFPSTIMSKLLARPNVKLFNAVAAEDLIVK----GGRVGGVVTNWALVSMNHDPQSCMDPNVMEAKVVVSFCGHDGPFGAPGVKRLKSFGMIEEVPGMKALAMNFAEDVIVRLPREVVPGMIVPGMEVAEIDGAPRMGPPFGAMMISGQKAAHLALK 744
            KHAALF STIMSK+L  PN KLFNA   EDLI +    G R+ GVVTNW LVSM+HD QSCMDPN + A +V+S  GHD P GA  VKRL S G IE++ GM+ L MN AED IV+  RE+VPG+IV GME++E+DGA RMGP FGAM++SG KAA  ALK
Sbjct:  153 KHAALFTSTIMSKVLQLPNCKLFNATCVEDLITRPSKEGVRISGVVTNWTLVSMHHDDQSCMDPNTINAPLVISTTGHDAPMGAFCVKRLVSMGRIEKLGGMRGLDMNVAEDAIVKGTREIVPGLIVGGMELSEVDGANRMGPTFGAMVLSGLKAAEEALK 313          
BLAST of CB291112 vs. ExPASy Swiss-Prot
Match: THI4_UROFA (Thiazole biosynthetic enzyme, mitochondrial OS=Uromyces fabae GN=THI2 PE=3 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 4.313e-48
Identity = 99/178 (55.62%), Postives = 125/178 (70.22%), Query Frame = -2
Query:  232 KHAALFPSTIMSKLLARPNVKLFNAVAAEDLIVKG-------GRVGGVVTNWALVSMNHDPQSCMDPNVMEAKVVVSFCGHDGPFGAPGVKRLKSFGMIEEVPGMKALAMNFAEDVIVRLPREVVPGMIVPGMEVAEIDGAPRMGPPFGAMMISGQKAAHLALKSLGHPNALAGTYVG 744
            KHAALF ST++SK+LA PNVK+FNA A EDLI+K         R+ G VTNW LVS+NHD QSCMDP+ + A +V SF GHDGPFGA  VKR+ S G+ E +  M+ L M  AED I    RE++PG+IV GME++E DG+ RMGP FGAM++SG++AA +AL+SL       G  VG
Sbjct:  158 KHAALFTSTVLSKVLAMPNVKMFNATACEDLIIKPCPINPGVQRIAGCVTNWTLVSLNHDHQSCMDPSTITAPLVCSFAGHDGPFGAFCVKRVASAGLSEGLGDMRPLDMERAEDHIANKTREILPGLIVGGMELSEFDGSARMGPTFGAMLLSGKRAAEVALQSLDRVKIEEGEVVG 335          
BLAST of CB291112 vs. ExPASy Swiss-Prot
Match: THI2_SCHPO (Thiazole biosynthetic enzyme, mitochondrial OS=Schizosaccharomyces pombe GN=thi2 PE=2 SV=2)

HSP 1 Score: 191.43 bits (485), Expect = 4.313e-48
Identity = 104/175 (59.43%), Postives = 121/175 (69.14%), Query Frame = -2
Query:  235 KHAALFPSTIMSKLLARPNVKLFNAVAAEDLIVKGG-----RVGGVVTNWALVSMNHDPQSCMDPNVMEAKVVVSFCGHDGPFGAPGVKRLKSFGMIEEVPGMKALAMNFAEDVIVRLPREVVPGMIVPGMEVAEIDGAPRMGPPFGAMMISGQKAAHLALKSLGHPNALAGTYV 744
            KHAALF ST+M++ LA PNVKLFNA A EDLIVK G     R+ GVVTNW LVS+NH  QSCMDPN + A +VVS  GHDGPFGA  VKRL S  ++  +  M+ L MN AED+IV+  REV PGMIV GME++E DGA RMGP FG MM SG KAA  AL       A+   Y+
Sbjct:  154 KHAALFTSTVMARTLALPNVKLFNATAVEDLIVKEGKDGKQRIAGVVTNWTLVSLNHGLQSCMDPNTINAHLVVSATGHDGPFGAFCVKRLASAQLVSNLHDMRPLDMNRAEDLIVKGTREVFPGMIVGGMELSEFDGANRMGPTFGGMMFSGIKAAQEALAIFDERKAVNEKYL 328          
BLAST of CB291112 vs. ExPASy Swiss-Prot
Match: THI4_ASPOR (Thiazole biosynthetic enzyme, mitochondrial OS=Aspergillus oryzae GN=thiA PE=3 SV=2)

HSP 1 Score: 184.496 bits (467), Expect = 5.272e-46
Identity = 93/162 (57.41%), Postives = 118/162 (72.84%), Query Frame = -2
Query:  274 KHAALFPSTIMSKLLARPNVKLFNAVAAEDLIVK-----GGRVGGVVTNWALVSMNHDPQSCMDPNVMEAKVVVSFCGHDGPFGAPGVKRLKSFGMIEEVPGMKALAMNFAEDVIVRLPREVVPGMIVPGMEVAEIDGAPRMGPPFGAMMISGQKAAHLALK 744
            KHA+LF ST+MSK+L+ PNVKLFNA A EDLI +       ++ GVV NW LV+++HD  SCMDPN + A V++S  GHDGPFGA   KRL S G ++++ GM+ L MN AED IV+  REV  G+I+ GME++EIDG  RMGP FGAM++SG KAA  ALK
Sbjct:  155 KHASLFTSTLMSKVLSFPNVKLFNATAVEDLITRPTENGNPQIAGVVVNWTLVTLHHDDHSCMDPNTINAPVIISTTGHDGPFGAFCAKRLVSMGSVDKLGGMRGLDMNSAEDAIVKNTREVTKGLIIGGMELSEIDGFNRMGPTFGAMVLSGVKAAEEALK 316          
The following BLAST results are available for this feature:
BLAST of CB291112 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 53
Match NameE-valueIdentityDescription
THI4_CITSI2.763e-8792.18Thiazole biosynthetic enzyme, chloroplastic OS=Cit... [more]
THI4_ALNGL6.370e-8487.71Thiazole biosynthetic enzyme, chloroplastic OS=Aln... [more]
THI4_ARATH1.624e-7983.80Thiazole biosynthetic enzyme, chloroplastic OS=Ara... [more]
THI41_MAIZE4.422e-7782.12Thiazole biosynthetic enzyme 1-1, chloroplastic OS... [more]
THI42_MAIZE2.866e-7685.71Thiazole biosynthetic enzyme 1-2, chloroplastic OS... [more]
THI4_FUSOX7.859e-5062.73Thiazole biosynthetic enzyme, mitochondrial OS=Fus... [more]
THI4_FUSSH1.026e-4963.35Thiazole biosynthetic enzyme, mitochondrial OS=Fus... [more]
THI4_UROFA4.313e-4855.62Thiazole biosynthetic enzyme, mitochondrial OS=Uro... [more]
THI2_SCHPO4.313e-4859.43Thiazole biosynthetic enzyme, mitochondrial OS=Sch... [more]
THI4_ASPOR5.272e-4657.41Thiazole biosynthetic enzyme, mitochondrial OS=Asp... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_02be10_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_02be10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB291112 ID=CB291112; Name=CB291112; organism=Citrus sinensis; type=EST; length=745bp
TTTTTTTTTTTTTTTTTGACCGGAAACAAACACTTTATTCACAAAACCTC
ACAACATTATCTCATTATTCGCATCAACCATCCATCACAACCACCTAAAT
ACAACTACTTTTTTGCCAAAGTTTATTTGCATGCACACAGCTGATGAGGG
ATGATGCCTGTTATTACCAAATTAAGCATCAGCAGTCTCAGCAAAATCAG
CTGCAGCTAAAATCAGCTCAGGGGGAACGCCCCCCACATATGTACCGGCT
AATGCATTCGGGTGGCCCAGGGACTTCAACGCCAAATGCGCAGCCTTCTG
CCCCGAAATCATCATTGCTCCAAATGGTGGCCCCATTCGAGGAGCACCAT
CAATCTCGGCAACTTCCATGCCGGGAACTATCATACCAGGCACAACCTCC
CTGGGCAGCCTCACAATAACATCTTCTGCAAAGTTCATGGCCAGTGCCTT
CATTCCAGGCACTTCCTCAATCATTCCGAAACTCTTCAACCTCTTTACTC
CAGGGGCCCCAAAAGGCCCATCATGGCCACAAAAGCTCACAACCACCTTC
GCTTCCATTACATTGGGATCCATGCAAGACTGGGGATCGTGATTCATTGA
CACCAACGCCCAGTTGGTCACCACACCACCAACTCTGCCGCCTTTGACTA
TCAAGTCCTCGGCTGCCACTGCATTAAAAAGCTTGACGTTGGGGCGGGCC
AGGAGCTTGCTCATTATAGTGGAGGGGAACAGCGCTGCATGCTTG
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