CB291113
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB291113 vs. ExPASy Swiss-Prot
Match: THI4_CITSI (Thiazole biosynthetic enzyme, chloroplastic OS=Citrus sinensis GN=THI1 PE=2 SV=1) HSP 1 Score: 289.271 bits (739), Expect = 1.429e-77 Identity = 151/180 (83.89%), Postives = 151/180 (83.89%), Query Frame = -1 Query: 181 MSKLLARPNVKFFNAVAAEDLIVKGGRVGGVVTNWALVSMNPDPQSCMDPNVMEAKVVVSFCGHDGPFGAPGVKRLKSIGMIEEVPGMKALAMNFAEDVFVRLPREVVPGMIVPAMEVAEIDGAPRMGPPFGPMMISGQXXXXXXXXXXXHPNALDGTYVGGVPPELILAAADFVETADA 720 MSKLLARPNVK FNAVAAEDLIVKGGRVGGVVTNWALVSMN D QSCMDPNVMEAKVVVS CGHDGPFGA GVKRLKSIGMIEEVPGMKAL MN AED VRL REVVPGMIV MEVAEIDGAPRMGP FG MMISGQ PNALDGTYVGGV PELILAAAD ETADA Sbjct: 177 MSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLKSIGMIEEVPGMKALDMNSAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSLGQPNALDGTYVGGVHPELILAAADSAETADA 356
BLAST of CB291113 vs. ExPASy Swiss-Prot
Match: THI4_ALNGL (Thiazole biosynthetic enzyme, chloroplastic OS=Alnus glutinosa GN=THI4 PE=2 SV=1) HSP 1 Score: 278.1 bits (710), Expect = 3.294e-74 Identity = 143/180 (79.44%), Postives = 148/180 (82.22%), Query Frame = -1 Query: 181 MSKLLARPNVKFFNAVAAEDLIVKGGRVGGVVTNWALVSMNPDPQSCMDPNVMEAKVVVSFCGHDGPFGAPGVKRLKSIGMIEEVPGMKALAMNFAEDVFVRLPREVVPGMIVPAMEVAEIDGAPRMGPPFGPMMISGQXXXXXXXXXXXHPNALDGTYVGGVPPELILAAADFVETADA 720 MSKLLARPNVK FNAVAAEDLIVKGGRVGGVVTNWALVSMN D QSCMDPNVMEAKVVVS CGHDGPFGA GVK L+SIGMI+ VPGMKAL MN AED VRL RE+VPGMIV MEVAEIDGAPRMGP FG MMISGQ PNALDG+YVGG+ PELILAAAD E ADA Sbjct: 173 MSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKSLRSIGMIDTVPGMKALDMNVAEDAIVRLTREIVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKALGLPNALDGSYVGGIHPELILAAADSAEIADA 352
BLAST of CB291113 vs. ExPASy Swiss-Prot
Match: THI4_ARATH (Thiazole biosynthetic enzyme, chloroplastic OS=Arabidopsis thaliana GN=THI1 PE=1 SV=1) HSP 1 Score: 268.855 bits (686), Expect = 1.999e-71 Identity = 138/180 (76.67%), Postives = 144/180 (80.00%), Query Frame = -1 Query: 181 MSKLLARPNVKFFNAVAAEDLIVKGGRVGGVVTNWALVSMNPDPQSCMDPNVMEAKVVVSFCGHDGPFGAPGVKRLKSIGMIEEVPGMKALAMNFAEDVFVRLPREVVPGMIVPAMEVAEIDGAPRMGPPFGPMMISGQXXXXXXXXXXXHPNALDGTYVGGVPPELILAAADFVETADA 720 MSKLLARPNVK FNAVAAEDLIVKG RVGGVVTNWALV+ N QSCMDPNVMEAK+VVS CGHDGPFGA GVKRLKSIGMI+ VPGMKAL MN AED VRL REVVPGMIV MEVAEIDGAPRMGP FG MMISGQ PNA+DGT VG + PEL+LAAAD ET DA Sbjct: 170 MSKLLARPNVKLFNAVAAEDLIVKGNRVGGVVTNWALVAQNHHTQSCMDPNVMEAKIVVSSCGHDGPFGATGVKRLKSIGMIDHVPGMKALDMNTAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAGQLALKALGLPNAIDGTLVGNLSPELVLAAADSAETVDA 349
BLAST of CB291113 vs. ExPASy Swiss-Prot
Match: THI41_MAIZE (Thiazole biosynthetic enzyme 1-1, chloroplastic OS=Zea mays GN=THI1-1 PE=2 SV=1) HSP 1 Score: 244.202 bits (622), Expect = 5.272e-64 Identity = 128/173 (73.99%), Postives = 134/173 (77.46%), Query Frame = -1 Query: 202 MSKLLARPNVKFFNAVAAEDLIVKGGRVGGVVTNWALVSMNPDPQSCMDPNVMEAKVVVSFCGHDGPFGAPGVKRLKSIGMIEEVPGMKALAMNFAEDVFVRLPREVVPGMIVPAMEVAEIDGAPRMGPPFGPMMISGQXXXXXXXXXXXHPNALDGTYVGGVPPELILAAAD 720 MS LLARPNVK FNAVA EDLIV+GGRVGGVVTNWALVSMN D QSCMDPNVMEAKVVVS CGHDGPFGA GVKRL+ IGMI VPGMKAL MN AED VRL REVVPGMIV MEVAEIDGAPRMGP FG MMISGQ PNA+DGT + EL++A D Sbjct: 176 MSLLLARPNVKLFNAVAVEDLIVRGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLQDIGMISAVPGMKALDMNTAEDEIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKALGRPNAVDGTMSPPLREELMIAYKD 348
BLAST of CB291113 vs. ExPASy Swiss-Prot
Match: THI42_MAIZE (Thiazole biosynthetic enzyme 1-2, chloroplastic OS=Zea mays GN=THI1-2 PE=2 SV=1) HSP 1 Score: 239.58 bits (610), Expect = 1.298e-62 Identity = 127/176 (72.16%), Postives = 134/176 (76.14%), Query Frame = -1 Query: 202 MSKLLARPNVKFFNAVAAEDLIVKGGRVGGVVTNWALVSMNPDPQSCMDPNVMEAKVVVSFCGHDGPFGAPGVKRLKSIGMIEEVPGMKALAMNFAEDVFVRLPREVVPGMIVPAMEVAEIDGAPRMGPPFGPMMISGQXXXXXXXXXXXHPNALDGTYVGGVP---PELILAAAD 720 MS+LLARPNVK FNAVA EDLIV+ GRVGGVVTNWALVSMN D QSCMDPNVMEAKVVVS CGHDGPFGA GVKRL+ IGMI VPGMKAL MN AED VRL REVVPGMIV MEVAEIDGAPRMGP FG MMISGQ PNA+DGT P E ++A+ D Sbjct: 173 MSRLLARPNVKLFNAVAVEDLIVRRGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLQDIGMISAVPGMKALDMNAAEDEIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKALGRPNAVDGTIPEVSPALREEFVIASKD 348
BLAST of CB291113 vs. ExPASy Swiss-Prot
Match: THI4_FUSOX (Thiazole biosynthetic enzyme, mitochondrial OS=Fusarium oxysporum GN=STI35 PE=2 SV=2) HSP 1 Score: 161.77 bits (408), Expect = 3.441e-39 Identity = 81/142 (57.04%), Postives = 101/142 (71.13%), Query Frame = -1 Query: 307 MSKLLARPNVKFFNAVAAEDLIVK----GGRVGGVVTNWALVSMNPDPQSCMDPNVMEAKVVVSFCGHDGPFGAPGVKRLKSIGMIEEVPGMKALAMNFAEDVFVRLPREVVPGMIVPAMEVAEIDGAPRMGPPFGPMMISG 720 MSK+L PN+K FNA EDLI + G R+ GVVTNW LVSM+ D QSCMDPN + A +++S GHDGP GA VKRL S+ IE++ GM+ L MN AED V+ RE+VPG+IV ME++E+DGA RMGP FG M +SG Sbjct: 159 MSKVLQMPNIKLFNATCVEDLITRPSEEGVRIAGVVTNWTLVSMHHDDQSCMDPNTINAPLIISTTGHDGPMGAFCVKRLVSMQRIEKLGGMRGLDMNLAEDAIVKGTREIVPGLIVGGMELSEVDGANRMGPTFGAMALSG 300
BLAST of CB291113 vs. ExPASy Swiss-Prot
Match: THI4_FUSSH (Thiazole biosynthetic enzyme, mitochondrial OS=Fusarium solani subsp. phaseoli GN=STI35 PE=2 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 4.494e-39 Identity = 82/142 (57.75%), Postives = 101/142 (71.13%), Query Frame = -1 Query: 307 MSKLLARPNVKFFNAVAAEDLIVK----GGRVGGVVTNWALVSMNPDPQSCMDPNVMEAKVVVSFCGHDGPFGAPGVKRLKSIGMIEEVPGMKALAMNFAEDVFVRLPREVVPGMIVPAMEVAEIDGAPRMGPPFGPMMISG 720 MSK+L PN K FNA EDLI + G R+ GVVTNW LVSM+ D QSCMDPN + A +V+S GHD P GA VKRL S+G IE++ GM+ L MN AED V+ RE+VPG+IV ME++E+DGA RMGP FG M++SG Sbjct: 163 MSKVLQLPNCKLFNATCVEDLITRPSKEGVRISGVVTNWTLVSMHHDDQSCMDPNTINAPLVISTTGHDAPMGAFCVKRLVSMGRIEKLGGMRGLDMNVAEDAIVKGTREIVPGLIVGGMELSEVDGANRMGPTFGAMVLSG 304
BLAST of CB291113 vs. ExPASy Swiss-Prot
Match: THI2_SCHPO (Thiazole biosynthetic enzyme, mitochondrial OS=Schizosaccharomyces pombe GN=thi2 PE=2 SV=2) HSP 1 Score: 159.073 bits (401), Expect = 2.230e-38 Identity = 85/143 (59.44%), Postives = 99/143 (69.23%), Query Frame = -1 Query: 307 MSKLLARPNVKFFNAVAAEDLIVKGG-----RVGGVVTNWALVSMNPDPQSCMDPNVMEAKVVVSFCGHDGPFGAPGVKRLKSIGMIEEVPGMKALAMNFAEDVFVRLPREVVPGMIVPAMEVAEIDGAPRMGPPFGPMMISG 720 M++ LA PNVK FNA A EDLIVK G R+ GVVTNW LVS+N QSCMDPN + A +VVS GHDGPFGA VKRL S ++ + M+ L MN AED+ V+ REV PGMIV ME++E DGA RMGP FG MM SG Sbjct: 164 MARTLALPNVKLFNATAVEDLIVKEGKDGKQRIAGVVTNWTLVSLNHGLQSCMDPNTINAHLVVSATGHDGPFGAFCVKRLASAQLVSNLHDMRPLDMNRAEDLIVKGTREVFPGMIVGGMELSEFDGANRMGPTFGGMMFSG 306
BLAST of CB291113 vs. ExPASy Swiss-Prot
Match: THI4_UROFA (Thiazole biosynthetic enzyme, mitochondrial OS=Uromyces fabae GN=THI2 PE=3 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 2.726e-36 Identity = 78/146 (53.42%), Postives = 99/146 (67.81%), Query Frame = -1 Query: 304 MSKLLARPNVKFFNAVAAEDLIVKG-------GRVGGVVTNWALVSMNPDPQSCMDPNVMEAKVVVSFCGHDGPFGAPGVKRLKSIGMIEEVPGMKALAMNFAEDVFVRLPREVVPGMIVPAMEVAEIDGAPRMGPPFGPMMISGQ 720 +SK+LA PNVK FNA A EDLI+K R+ G VTNW LVS+N D QSCMDP+ + A +V SF GHDGPFGA VKR+ S G+ E + M+ L M AED RE++PG+IV ME++E DG+ RMGP FG M++SG+ Sbjct: 168 LSKVLAMPNVKMFNATACEDLIIKPCPINPGVQRIAGCVTNWTLVSLNHDHQSCMDPSTITAPLVCSFAGHDGPFGAFCVKRVASAGLSEGLGDMRPLDMERAEDHIANKTREILPGLIVGGMELSEFDGSARMGPTFGAMLLSGK 313
BLAST of CB291113 vs. ExPASy Swiss-Prot
Match: THI4_ASPOR (Thiazole biosynthetic enzyme, mitochondrial OS=Aspergillus oryzae GN=thiA PE=3 SV=2) HSP 1 Score: 150.984 bits (380), Expect = 6.074e-36 Identity = 75/143 (52.45%), Postives = 99/143 (69.23%), Query Frame = -1 Query: 307 MSKLLARPNVKFFNAVAAEDLIVK-----GGRVGGVVTNWALVSMNPDPQSCMDPNVMEAKVVVSFCGHDGPFGAPGVKRLKSIGMIEEVPGMKALAMNFAEDVFVRLPREVVPGMIVPAMEVAEIDGAPRMGPPFGPMMISG 720 MSK+L+ PNVK FNA A EDLI + ++ GVV NW LV+++ D SCMDPN + A V++S GHDGPFGA KRL S+G ++++ GM+ L MN AED V+ REV G+I+ ME++EIDG RMGP FG M++SG Sbjct: 165 MSKVLSFPNVKLFNATAVEDLITRPTENGNPQIAGVVVNWTLVTLHHDDHSCMDPNTINAPVIISTTGHDGPFGAFCAKRLVSMGSVDKLGGMRGLDMNSAEDAIVKNTREVTKGLIIGGMELSEIDGFNRMGPTFGAMVLSG 307 The following BLAST results are available for this feature:
BLAST of CB291113 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 33
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CB291113 ID=CB291113; Name=CB291113; organism=Citrus sinensis; type=EST; length=720bpback to top |