CB292802
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB292802 vs. ExPASy Swiss-Prot
Match: ELI_PEA (Early light-induced protein, chloroplastic OS=Pisum sativum PE=2 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 8.578e-43 Identity = 102/190 (53.68%), Postives = 129/190 (67.89%), Query Frame = -2 Query: 211 SVVAARVTGIR-KSGVYQFSSVK--YLPGTLQRNVSLSVRCMAKNEQQKDQ-----------STQPP-----KLPRISTKFFDVFAFSGPAPERINGRLAMIGFVAALAVELSKGQDVFAQLSDGGVAWFLGTXXXXXXXXXVPLFKGVSVEFKSDGFMTSDAELWNGRFAMMGLVALAVPEFVKGSTLV 723 S+++ +T I +S V QF+++ Y+P TL+RNVSL VR MA+ E ++ ST P + P++STKF D+ AFSGPAPERINGRLAMIGFVAA+ VE++KGQ + QLS GGVAWFLGT +P F+GVSVE KS M+SDAE WNGR AM+GLVALA EFVKG++LV Sbjct: 8 SIMSNSMTNISSRSRVNQFTNIPSVYIP-TLRRNVSLKVRSMAEGEPKEQSKVAVDPTTPTASTPTPQPAYTRPPKMSTKFSDLMAFSGPAPERINGRLAMIGFVAAMGVEIAKGQGLSEQLSGGGVAWFLGTSVLLSLASLIPFFQGVSVESKSKSIMSSDAEFWNGRIAMLGLVALAFTEFVKGTSLV 196
BLAST of CB292802 vs. ExPASy Swiss-Prot
Match: DS22_CRAPL (Desiccation stress protein DSP-22, chloroplastic OS=Craterostigma plantagineum GN=DSP-22 PE=2 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 4.718e-33 Identity = 77/157 (49.04%), Postives = 104/157 (66.24%), Query Frame = -2 Query: 211 LQRNVSLSVRCMAKN------EQQKDQSTQP------PKLPRISTK-FFDVFAFSGPAPERINGRLAMIGFVAALAVELSKGQDVFAQLSDGGVAWFLGTXXXXXXXXXVPLFKGVSVEFKSDGFMTSDAELWNGRFAMMGLVALAVPEFVKGSTLV 642 ++RN +VR M ++ +QQK Q T P ++TK D+F+F G APERINGR AMIGFVAA+ VEL+ G+DVF+Q+ +GGV WFL T +P+++G+S E K++GF SDAE+WNGRFAM+GLVALA E+VKG L+ Sbjct: 41 MRRNAKFTVRSMREDNEKEEQQQQKQQQTHDGGPDLTPNRTEVTTKRTVDLFSFDGLAPERINGRSAMIGFVAAVGVELATGRDVFSQVFNGGVMWFLLTSAVLVLATLIPIYRGLSPEAKNNGFWNSDAEIWNGRFAMIGLVALAFTEYVKGGPLI 197
BLAST of CB292802 vs. ExPASy Swiss-Prot
Match: ELI9_HORVU (Low molecular mass early light-inducible protein HV90, chloroplastic OS=Hordeum vulgare PE=2 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 1.088e-29 Identity = 78/185 (42.16%), Postives = 103/185 (55.68%), Query Frame = -2 Query: 211 MAASLATQSMLGSSVVAARVTGIRKSGVYQFSSVKYLPGTLQRNVSLSVRCMAKNEQQKDQSTQPPKLPRISTKFFDVFAFSGPAPERINGRLAMIGFVAALAVELSKGQDVFAQLSDG-GVAWFLGTXXXXXXXXXVPLFKGVSVEFKSDGFMTSDAELWNGRFAMMGLVALAVPEFVKGSTLV 762 MA ++ S G++VV +S F + + LP +L R + Q + S PP P+ ST +D AFSGPAPERINGRLAM+GFV ALAVE +G + +QL G G AWF T VPL +G S E ++ M ++AELWNGRFAM+GLVALA E + G+ + Sbjct: 1 MATMMSMSSFAGAAVVP-------RSSASSFGA-RSLP-------ALGRRALVVRAQTEGPSAPPPNKPKASTSIWDEMAFSGPAPERINGRLAMVGFVTALAVEAGRGDGLLSQLGSGTGQAWFAYTVAVLSMASLVPLLQGESAEGRAGAIMNANAELWNGRFAMLGLVALAATEIITGAPFI 170
BLAST of CB292802 vs. ExPASy Swiss-Prot
Match: ELI6_HORVU (Low molecular mass early light-inducible protein HV60, chloroplastic OS=Hordeum vulgare PE=2 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 1.088e-29 Identity = 71/156 (45.51%), Postives = 93/156 (59.62%), Query Frame = -2 Query: 211 FSSVKYLP-GTLQRNVSLSVRCMAKNEQQKDQSTQPPKLPRISTKFFDVFAFSGPAPERINGRLAMIGFVAALAVELSKGQDVFAQLSDG-GVAWFLGTXXXXXXXXXVPLFKGVSVEFKSDGFMTSDAELWNGRFAMMGLVALAVPEFVKGSTLV 672 F+ LP G+ + +L R + Q + + PP P+ ST +D AFSGPAPERINGRLAM+GFV ALAVE +G + +QL G G AWF T VPL +G S E ++ M ++AELWNGRFAM+GLVALA E + G+ + Sbjct: 10 FAGAAVLPRGSARSLPALGRRTLVVRAQTEGPNAPPPNKPKASTSIWDAMAFSGPAPERINGRLAMVGFVTALAVEAGRGDGLLSQLGSGTGQAWFAYTVAMLSMASLVPLLQGESAEGRAGAIMNANAELWNGRFAMIGLVALAATEIITGTPFI 165
BLAST of CB292802 vs. ExPASy Swiss-Prot
Match: ELI5_HORVU (High molecular mass early light-inducible protein HV58, chloroplastic OS=Hordeum vulgare PE=2 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 5.968e-28 Identity = 64/121 (52.89%), Postives = 81/121 (66.94%), Query Frame = -2 Query: 211 PKLPRISTKFFDVFAFSGPAPERINGRLAMIGFVAALAVELSKGQDVFAQLS--DGGVAWFLGTXXXXXXXXXVPLFKGVSVEFKSDGFMTSDAELWNGRFAMMGLVALAVPEFVKGSTLV 567 P + + +D AFSGPAPERINGRLAM+GFVAAL+VE ++G + Q+ G+AWFL T +PL +G SVE KS G ++DAELWNGRFAM+GLVALA EF+ G+ V Sbjct: 109 PVTKKANPSVWDALAFSGPAPERINGRLAMVGFVAALSVEAARGGGLLDQVGMWSSGLAWFLATAGVFSVASLLPLLQGQSVESKSSGIWSADAELWNGRFAMLGLVALAATEFITGAPFV 229
BLAST of CB292802 vs. ExPASy Swiss-Prot
Match: CBR_DUNBA (Carotene biosynthesis-related protein CBR, chloroplastic OS=Dunaliella bardawil GN=CBR PE=1 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.427e-13 Identity = 61/163 (37.42%), Postives = 78/163 (47.85%), Query Frame = -2 Query: 214 SSVKYLPGTLQRNVSLSVRCMAKNEQQKDQSTQPPKLPR--------ISTKFFDVFAFSGPAPERINGRLAMIGFVAALAVELSKGQDVFAQLSDGGVAWFLGTXXXXXXXXXVPLF---KGVSVEFKSDGFMTSDAELWNGRFAMMGLVALAVPEFVKGSTL 669 +S+ P L R + C + + ST PP P + +V FSG APE INGRLAM+GFVAAL ELS G+ V QL D L T +P F KG ++ G T DAE+ NGRFAM+G A+ V E ++G L Sbjct: 16 ASINVRPAPLLRTAAPKRVCKHIVRAENNPSTPPPSSPSPPPPPPTPAAPTVTEVMGFSG-APEIINGRLAMLGFVAALGAELSTGESVLTQLGDQPTLIAL-TFVLFSAASLIPAFARRKGDAM-----GPFTPDAEMTNGRFAMIGFAAMLVYEGIQGIAL 171 The following BLAST results are available for this feature:
BLAST of CB292802 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CB292802 ID=CB292802; Name=CB292802; organism=Citrus sinensis; type=EST; length=832bpback to top |