CB292813
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB292813 vs. ExPASy Swiss-Prot
Match: SEP1_ARATH (Developmental protein SEPALLATA 1 OS=Arabidopsis thaliana GN=SEP1 PE=1 SV=2) HSP 1 Score: 184.496 bits (467), Expect = 4.662e-46 Identity = 92/106 (86.79%), Postives = 103/106 (97.17%), Query Frame = 2 Query: 380 MGRGRVELKKI*NKINRQVTFAKRKNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTLERYQKCTYGAVEV-NKPAKELKSSYREYLKLKTRFESLQ 694 MGRGRVELK+I NKINRQVTFAKR+NGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSS+MLKTL+RYQKC+YG++EV NKPAKEL++SYREYLKLK R+E+LQ Sbjct: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSNMLKTLDRYQKCSYGSIEVNNKPAKELENSYREYLKLKGRYENLQ 106
BLAST of CB292813 vs. ExPASy Swiss-Prot
Match: SEP2_ARATH (Developmental protein SEPALLATA 2 OS=Arabidopsis thaliana GN=SEP2 PE=1 SV=1) HSP 1 Score: 182.956 bits (463), Expect = 1.356e-45 Identity = 90/106 (84.91%), Postives = 103/106 (97.17%), Query Frame = 2 Query: 380 MGRGRVELKKI*NKINRQVTFAKRKNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTLERYQKCTYGAVEV-NKPAKELKSSYREYLKLKTRFESLQ 694 MGRGRVELK+I NKINRQVTFAKR+NGLLKKAYELSVLCDAEV+LI+FSNRGKLYEFCS+S+MLKTLERYQKC+YG++EV NKPAKEL++SYREYLKLK R+E+LQ Sbjct: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVSLIVFSNRGKLYEFCSTSNMLKTLERYQKCSYGSIEVNNKPAKELENSYREYLKLKGRYENLQ 106
BLAST of CB292813 vs. ExPASy Swiss-Prot
Match: CMB1_DIACA (MADS-box protein CMB1 OS=Dianthus caryophyllus GN=CMB1 PE=2 SV=1) HSP 1 Score: 170.629 bits (431), Expect = 6.966e-42 Identity = 82/105 (78.10%), Postives = 97/105 (92.38%), Query Frame = 2 Query: 380 MGRGRVELKKI*NKINRQVTFAKRKNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTLERYQKCTYGAVEVNKPAKELKSSYREYLKLKTRFESLQ 694 MGRGRVELK+I NKINRQVTFAKR+NGLLKKAYELSVLCDAEVALI+FSNRGKLYEFCS+S M KTLERYQ+C+YG++E ++P+KE +SSY+EYLKLK + + LQ Sbjct: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIVFSNRGKLYEFCSTSCMNKTLERYQRCSYGSLETSQPSKETESSYQEYLKLKAKVDVLQ 105
BLAST of CB292813 vs. ExPASy Swiss-Prot
Match: AGL9_PETHY (Agamous-like MADS-box protein AGL9 homolog OS=Petunia hybrida GN=FBP2 PE=1 SV=2) HSP 1 Score: 169.088 bits (427), Expect = 2.027e-41 Identity = 88/107 (82.24%), Postives = 94/107 (87.85%), Query Frame = 2 Query: 380 MGRGRVELKKI*NKINRQVTFAKRKNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTLERYQKCTYGAVEVNKPAKELK--SSYREYLKLKTRFESLQ 694 MGRGRVELK+I NKINRQVTFAKR+NGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTLERYQKC YGA E N +E SS +EYLKLK R+E+LQ Sbjct: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTLERYQKCNYGAPETNISTREALEISSQQEYLKLKARYEALQ 107
BLAST of CB292813 vs. ExPASy Swiss-Prot
Match: SEP3_ARATH (Developmental protein SEPALLATA 3 OS=Arabidopsis thaliana GN=SEP3 PE=1 SV=1) HSP 1 Score: 168.703 bits (426), Expect = 2.647e-41 Identity = 87/109 (79.82%), Postives = 96/109 (88.07%), Query Frame = 2 Query: 380 MGRGRVELKKI*NKINRQVTFAKRKNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTLERYQKCTYGAVEVNKPAKEL----KSSYREYLKLKTRFESLQ 694 MGRGRVELK+I NKINRQVTFAKR+NGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSML+TLERYQKC YGA E N P++E SS +EYLKLK R+++LQ Sbjct: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLRTLERYQKCNYGAPEPNVPSREALAVELSSQQEYLKLKERYDALQ 109
BLAST of CB292813 vs. ExPASy Swiss-Prot
Match: MTF1_PEA (MADS-box transcription factor 1 OS=Pisum sativum GN=MTF1 PE=2 SV=1) HSP 1 Score: 168.318 bits (425), Expect = 3.457e-41 Identity = 87/109 (79.82%), Postives = 95/109 (87.16%), Query Frame = 2 Query: 380 MGRGRVELKKI*NKINRQVTFAKRKNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTLERYQKCTYGAVEVNKPAKEL----KSSYREYLKLKTRFESLQ 694 MGRGRVELK++ NKINRQVTFAKR+NGLLKKAYELSVLCDAEVALI+FSNRGKLYEFCS+SSMLKTLERYQKC YGA E N +KE SS +EYLKLK R+ESLQ Sbjct: 1 MGRGRVELKRVENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIVFSNRGKLYEFCSTSSMLKTLERYQKCNYGAPEGNVTSKEALVLELSSQQEYLKLKARYESLQ 109
BLAST of CB292813 vs. ExPASy Swiss-Prot
Match: AGL9_SINAL (Agamous-like MADS-box protein AGL9 homolog OS=Sinapis alba GN=AGL9 PE=2 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 1.716e-40 Identity = 85/109 (77.98%), Postives = 95/109 (87.16%), Query Frame = 2 Query: 380 MGRGRVELKKI*NKINRQVTFAKRKNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTLERYQKCTYGAVEVNKPAKEL----KSSYREYLKLKTRFESLQ 694 MGRGRVELK+I NKINRQVTFAKR+NGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSM++TLERYQKC YG E N P++E SS +EYLKLK R+++LQ Sbjct: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMIRTLERYQKCNYGPPEPNVPSREALAVELSSQQEYLKLKERYDALQ 109
BLAST of CB292813 vs. ExPASy Swiss-Prot
Match: AGL9_SOLLC (Agamous-like MADS-box protein AGL9 homolog OS=Solanum lycopersicum GN=TDR5 PE=2 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 2.927e-40 Identity = 87/107 (81.31%), Postives = 93/107 (86.92%), Query Frame = 2 Query: 380 MGRGRVELKKI*NKINRQVTFAKRKNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTLERYQKCTYGAVEVNKPAKELK--SSYREYLKLKTRFESLQ 694 MGRGRVELK+I KINRQVTFAKR+NGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTLERYQKC YGA E N +E SS +EYLKLK R+E+LQ Sbjct: 1 MGRGRVELKRIEGKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTLERYQKCNYGAPEPNISTREALEISSQQEYLKLKGRYEALQ 107
BLAST of CB292813 vs. ExPASy Swiss-Prot
Match: MADS7_ORYSJ (MADS-box transcription factor 7 OS=Oryza sativa subsp. japonica GN=MADS7 PE=1 SV=2) HSP 1 Score: 161.384 bits (407), Expect = 4.226e-39 Identity = 82/108 (75.93%), Postives = 93/108 (86.11%), Query Frame = 2 Query: 380 MGRGRVELKKI*NKINRQVTFAKRKNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTLERYQKCTYGAVEV---NKPAKELKSSYREYLKLKTRFESLQ 694 MGRGRVELK+I NKINRQVTFAKR+NGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCS+ SM KTLE+YQKC+Y E N+ +++LK+S EYLKLK R E+LQ Sbjct: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSTQSMTKTLEKYQKCSYAGPETAVQNRESEQLKASRNEYLKLKARVENLQ 108
BLAST of CB292813 vs. ExPASy Swiss-Prot
Match: MADS7_ORYSI (MADS-box transcription factor 7 OS=Oryza sativa subsp. indica GN=MADS7 PE=2 SV=2) HSP 1 Score: 161.384 bits (407), Expect = 4.226e-39 Identity = 82/108 (75.93%), Postives = 93/108 (86.11%), Query Frame = 2 Query: 380 MGRGRVELKKI*NKINRQVTFAKRKNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTLERYQKCTYGAVEV---NKPAKELKSSYREYLKLKTRFESLQ 694 MGRGRVELK+I NKINRQVTFAKR+NGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCS+ SM KTLE+YQKC+Y E N+ +++LK+S EYLKLK R E+LQ Sbjct: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSTQSMTKTLEKYQKCSYAGPETAVQNRESEQLKASRNEYLKLKARVENLQ 108 The following BLAST results are available for this feature:
BLAST of CB292813 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 116
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CB292813 ID=CB292813; Name=CB292813; organism=Citrus sinensis; type=EST; length=696bpback to top |