CB292888

Overview
NameCB292888
Unique NameCB292888
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length637
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CB292888 vs. ExPASy Swiss-Prot
Match: METK2_SUASA (S-adenosylmethionine synthetase 2 OS=Suaeda salsa GN=METK2 PE=2 SV=1)

HSP 1 Score: 275.404 bits (703), Expect = 1.709e-73
Identity = 134/149 (89.93%), Postives = 139/149 (93.29%), Query Frame = 1 
Query:  190 MGTFLFTS*SVNEGHPDKLGDQVSDAVLDACLAQDPDSKVACETCTKTNMDMVFGEITTKANVDYQKIVRDTCGSIGFTSADVGLDADQCKVLVNIEQQSPDIAQGVHGHLTKRPEEIGAGDHGHMFGYTTDETPELMPLSHVLAT*LG 636
            M +FLFTS SVNEGHPDKL DQVSDAVLDACLAQDPDSKVACETCTKTNM MVFGEITTKAN+DY+KIVRDTC SIGF SADVGLDAD CKVLVNIEQQSPDIAQGVHGHLTKRPE++GAGD GHMFGY TDETPELMPLSHVLAT LG
Sbjct:    1 MESFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANIDYEKIVRDTCRSIGFVSADVGLDADNCKVLVNIEQQSPDIAQGVHGHLTKRPEDVGAGDQGHMFGYATDETPELMPLSHVLATKLG 149
[Close]
BLAST of CB292888 vs. ExPASy Swiss-Prot
Match: METK2_BETVU (S-adenosylmethionine synthetase 2 OS=Beta vulgaris GN=SAMS2 PE=2 SV=1)

HSP 1 Score: 275.018 bits (702), Expect = 2.232e-73
Identity = 136/149 (91.28%), Postives = 139/149 (93.29%), Query Frame = 1 
Query:  190 MGTFLFTS*SVNEGHPDKLGDQVSDAVLDACLAQDPDSKVACETCTKTNMDMVFGEITTKANVDYQKIVRDTCGSIGFTSADVGLDADQCKVLVNIEQQSPDIAQGVHGHLTKRPEEIGAGDHGHMFGYTTDETPELMPLSHVLAT*LG 636
            M TFLFTS SVNEGHPDKL DQVSDAVLDACLAQDP+SKVACETCTKTNM MVFGEITTKA VDY+KIVRDTC SIGFTS DVGLDAD+CKVLVNIEQQSPDIAQGVHGHLTKRPEEIGAGD GHMFGY TDETPELMPLSHVLAT LG
Sbjct:    1 METFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPESKVACETCTKTNMVMVFGEITTKAEVDYEKIVRDTCRSIGFTSDDVGLDADKCKVLVNIEQQSPDIAQGVHGHLTKRPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLG 149
[Close]
BLAST of CB292888 vs. ExPASy Swiss-Prot
Match: METK_LITCN (S-adenosylmethionine synthetase OS=Litchi chinensis GN=SAMS PE=2 SV=1)

HSP 1 Score: 274.633 bits (701), Expect = 2.915e-73
Identity = 135/149 (90.60%), Postives = 139/149 (93.29%), Query Frame = 1 
Query:  190 MGTFLFTS*SVNEGHPDKLGDQVSDAVLDACLAQDPDSKVACETCTKTNMDMVFGEITTKANVDYQKIVRDTCGSIGFTSADVGLDADQCKVLVNIEQQSPDIAQGVHGHLTKRPEEIGAGDHGHMFGYTTDETPELMPLSHVLAT*LG 636
            M TFLFTS SVNEGHPDKL DQVSDAVLDACLAQDPDSKVACETCT+TNM MVFGEITTKANVDY++IVRDTC SIGFTS DVGLDAD CKVLVNIEQQSPDIAQGVHGHLTK+PEEIGAGD GHMFGY TDETPELMPLSHVLAT LG
Sbjct:    1 METFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTRTNMVMVFGEITTKANVDYEQIVRDTCRSIGFTSDDVGLDADNCKVLVNIEQQSPDIAQGVHGHLTKKPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLG 149
[Close]
BLAST of CB292888 vs. ExPASy Swiss-Prot
Match: METK4_POPTR (S-adenosylmethionine synthetase 4 OS=Populus trichocarpa GN=METK4 PE=2 SV=1)

HSP 1 Score: 273.863 bits (699), Expect = 4.972e-73
Identity = 133/149 (89.26%), Postives = 139/149 (93.29%), Query Frame = 1 
Query:  190 MGTFLFTS*SVNEGHPDKLGDQVSDAVLDACLAQDPDSKVACETCTKTNMDMVFGEITTKANVDYQKIVRDTCGSIGFTSADVGLDADQCKVLVNIEQQSPDIAQGVHGHLTKRPEEIGAGDHGHMFGYTTDETPELMPLSHVLAT*LG 636
            M TFLFTS SVNEGHPDKL DQVSDA+LDACLAQDP+SKVACETC+KTNM MVFGEITTKANVDY+KIVRDTC  IGFTSADVGLDAD CKVLVNIEQQSPDIAQGVHGHLTK+PEEIGAGD GHMFGY TDETPELMPL+HVLAT LG
Sbjct:    1 MDTFLFTSESVNEGHPDKLCDQVSDAILDACLAQDPESKVACETCSKTNMVMVFGEITTKANVDYEKIVRDTCRGIGFTSADVGLDADNCKVLVNIEQQSPDIAQGVHGHLTKKPEEIGAGDQGHMFGYATDETPELMPLTHVLATKLG 149
[Close]
BLAST of CB292888 vs. ExPASy Swiss-Prot
Match: METK_POPDE (S-adenosylmethionine synthetase OS=Populus deltoides GN=METK PE=2 SV=1)

HSP 1 Score: 273.092 bits (697), Expect = 8.481e-73
Identity = 133/147 (90.48%), Postives = 138/147 (93.88%), Query Frame = 1 
Query:  196 TFLFTS*SVNEGHPDKLGDQVSDAVLDACLAQDPDSKVACETCTKTNMDMVFGEITTKANVDYQKIVRDTCGSIGFTSADVGLDADQCKVLVNIEQQSPDIAQGVHGHLTKRPEEIGAGDHGHMFGYTTDETPELMPLSHVLAT*LG 636
            TFLFTS SVNEGHPDKL DQ+SDAVLDACLAQDPDSKVACETCTKTNM MVFGEITTKA+VDY+KIVRDTC +IGFTSADVGLDAD CKVLVNIEQQSPDIAQGVHGH +KRPEEIGAGD GHMFGY TDETPELMPLSHVLAT LG
Sbjct:    4 TFLFTSESVNEGHPDKLCDQISDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKADVDYEKIVRDTCRNIGFTSADVGLDADNCKVLVNIEQQSPDIAQGVHGHFSKRPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLG 150
[Close]
BLAST of CB292888 vs. ExPASy Swiss-Prot
Match: METK3_POPTR (S-adenosylmethionine synthetase 3 OS=Populus trichocarpa GN=METK3 PE=2 SV=1)

HSP 1 Score: 273.092 bits (697), Expect = 8.481e-73
Identity = 133/147 (90.48%), Postives = 138/147 (93.88%), Query Frame = 1 
Query:  196 TFLFTS*SVNEGHPDKLGDQVSDAVLDACLAQDPDSKVACETCTKTNMDMVFGEITTKANVDYQKIVRDTCGSIGFTSADVGLDADQCKVLVNIEQQSPDIAQGVHGHLTKRPEEIGAGDHGHMFGYTTDETPELMPLSHVLAT*LG 636
            TFLFTS SVNEGHPDKL DQ+SDAVLDACLAQDPDSKVACETCTKTNM MVFGEITTKA+VDY+KIVRDTC +IGFTSADVGLDAD CKVLVNIEQQSPDIAQGVHGH +KRPEEIGAGD GHMFGY TDETPELMPLSHVLAT LG
Sbjct:    4 TFLFTSESVNEGHPDKLCDQISDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKADVDYEKIVRDTCRNIGFTSADVGLDADNCKVLVNIEQQSPDIAQGVHGHFSKRPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLG 150
[Close]
BLAST of CB292888 vs. ExPASy Swiss-Prot
Match: METK5_VITVI (S-adenosylmethionine synthetase 5 OS=Vitis vinifera GN=METK5 PE=3 SV=1)

HSP 1 Score: 272.707 bits (696), Expect = 1.108e-72
Identity = 133/149 (89.26%), Postives = 138/149 (92.62%), Query Frame = 1 
Query:  190 MGTFLFTS*SVNEGHPDKLGDQVSDAVLDACLAQDPDSKVACETCTKTNMDMVFGEITTKANVDYQKIVRDTCGSIGFTSADVGLDADQCKVLVNIEQQSPDIAQGVHGHLTKRPEEIGAGDHGHMFGYTTDETPELMPLSHVLAT*LG 636
            M TFLFTS SVNEGHPDKL DQ+SDAVLDACLAQDPDSKVACETCTKTNM MVFGEITTKA++DY+KIVRDTC +IGF S DVGLDAD CKVLVNIEQQSPDIAQGVHGHLTKRPEEIGAGD GHMFGY TDETPELMPLSHVLAT LG
Sbjct:    1 METFLFTSESVNEGHPDKLCDQISDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKADIDYEKIVRDTCRTIGFVSDDVGLDADNCKVLVNIEQQSPDIAQGVHGHLTKRPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLG 149
[Close]
BLAST of CB292888 vs. ExPASy Swiss-Prot
Match: METK2_VITVI (S-adenosylmethionine synthetase 2 OS=Vitis vinifera GN=METK2 PE=3 SV=1)

HSP 1 Score: 272.707 bits (696), Expect = 1.108e-72
Identity = 134/149 (89.93%), Postives = 136/149 (91.28%), Query Frame = 1 
Query:  190 MGTFLFTS*SVNEGHPDKLGDQVSDAVLDACLAQDPDSKVACETCTKTNMDMVFGEITTKANVDYQKIVRDTCGSIGFTSADVGLDADQCKVLVNIEQQSPDIAQGVHGHLTKRPEEIGAGDHGHMFGYTTDETPELMPLSHVLAT*LG 636
            M TFLFTS SVNEGHPDKL DQ+SDAVLDACL QDPDSKVACETCTKTNM MVFGEITTKANVDY+KIVRDTC  IGF S DVGLDAD CKVLVNIEQQSPDIAQGVHGHLTKRPEEIGAGD GHMFGY TDETPELMPLSHVLAT LG
Sbjct:    1 METFLFTSESVNEGHPDKLCDQISDAVLDACLQQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCREIGFVSDDVGLDADNCKVLVNIEQQSPDIAQGVHGHLTKRPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLG 149
[Close]
BLAST of CB292888 vs. ExPASy Swiss-Prot
Match: METK1_ORYSJ (S-adenosylmethionine synthetase 1 OS=Oryza sativa subsp. japonica GN=SAM1 PE=2 SV=1)

HSP 1 Score: 272.707 bits (696), Expect = 1.108e-72
Identity = 133/149 (89.26%), Postives = 138/149 (92.62%), Query Frame = 1 
Query:  190 MGTFLFTS*SVNEGHPDKLGDQVSDAVLDACLAQDPDSKVACETCTKTNMDMVFGEITTKANVDYQKIVRDTCGSIGFTSADVGLDADQCKVLVNIEQQSPDIAQGVHGHLTKRPEEIGAGDHGHMFGYTTDETPELMPLSHVLAT*LG 636
            + TFLFTS SVNEGHPDKL DQVSDAVLDACLA+DPDSKVACETCTKTNM MVFGEITTKANVDY+KIVR+TC +IGF SADVGLDAD CKVLVNIEQQSPDIAQGVHGH TKRPEEIGAGD GHMFGY TDETPELMPLSHVLAT LG
Sbjct:    4 LDTFLFTSESVNEGHPDKLCDQVSDAVLDACLAEDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRETCRNIGFVSADVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLG 152
[Close]
BLAST of CB292888 vs. ExPASy Swiss-Prot
Match: METK1_ORYSI (S-adenosylmethionine synthetase 1 OS=Oryza sativa subsp. indica GN=SAM1 PE=2 SV=2)

HSP 1 Score: 272.707 bits (696), Expect = 1.108e-72
Identity = 133/149 (89.26%), Postives = 138/149 (92.62%), Query Frame = 1 
Query:  190 MGTFLFTS*SVNEGHPDKLGDQVSDAVLDACLAQDPDSKVACETCTKTNMDMVFGEITTKANVDYQKIVRDTCGSIGFTSADVGLDADQCKVLVNIEQQSPDIAQGVHGHLTKRPEEIGAGDHGHMFGYTTDETPELMPLSHVLAT*LG 636
            + TFLFTS SVNEGHPDKL DQVSDAVLDACLA+DPDSKVACETCTKTNM MVFGEITTKANVDY+KIVR+TC +IGF SADVGLDAD CKVLVNIEQQSPDIAQGVHGH TKRPEEIGAGD GHMFGY TDETPELMPLSHVLAT LG
Sbjct:    4 LDTFLFTSESVNEGHPDKLCDQVSDAVLDACLAEDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRETCRNIGFVSADVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLG 152
The following BLAST results are available for this feature:
BLAST of CB292888 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK2_SUASA1.709e-7389.93S-adenosylmethionine synthetase 2 OS=Suaeda salsa ... [more]
METK2_BETVU2.232e-7391.28S-adenosylmethionine synthetase 2 OS=Beta vulgaris... [more]
METK_LITCN2.915e-7390.60S-adenosylmethionine synthetase OS=Litchi chinensi... [more]
METK4_POPTR4.972e-7389.26S-adenosylmethionine synthetase 4 OS=Populus trich... [more]
METK_POPDE8.481e-7390.48S-adenosylmethionine synthetase OS=Populus deltoid... [more]
METK3_POPTR8.481e-7390.48S-adenosylmethionine synthetase 3 OS=Populus trich... [more]
METK5_VITVI1.108e-7289.26S-adenosylmethionine synthetase 5 OS=Vitis vinifer... [more]
METK2_VITVI1.108e-7289.93S-adenosylmethionine synthetase 2 OS=Vitis vinifer... [more]
METK1_ORYSJ1.108e-7289.26S-adenosylmethionine synthetase 1 OS=Oryza sativa ... [more]
METK1_ORYSI1.108e-7289.26S-adenosylmethionine synthetase 1 OS=Oryza sativa ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_05ah04_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_05ah04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB292888 ID=CB292888; Name=CB292888; organism=Citrus sinensis; type=EST; length=637bp
GCACTTATGATTCAGCTGCCGTTTTACCTCCTCTCTCTCTTCTCTCAGCG
TATGCATATCTGGCTTTCTCTCGTTCTTCTGGGTACTTACCATTTTCGTA
TATCGCCACCATTCAATTCCATTTGTACTCGCACCACGGGCTCCTGCAAA
GCGAAAGCTGCAGCTTCAGGATAAATCAAATTAAAGAAGATGGGAACATT
TCTTTTCACATCATAATCAGTGAACGAGGGTCACCCGGACAAGCTGGGTG
ACCAAGTTTCGGACGCAGTACTGGACGCGTGTTTGGCTCAGGATCCTGAC
AGCAAAGTTGCTTGTGAAACATGCACAAAGACCAACATGGACATGGTTTT
TGGAGAAATTACAACCAAGGCCAATGTGGATTACCAGAAAATCGTGCGTG
ATACATGCGGATCGATTGGGTTCACATCGGCCGATGTGGGGCTTGATGCT
GATCAGTGCAAAGTTCTTGTTAATATTGAGCAGCAGAGCCCTGACATTGC
TCAGGGTGTTCATGGGCATCTCACAAAGCGGCCTGAGGAGATTGGTGCTG
GTGACCATGGTCACATGTTTGGTTACACCACTGATGAGACTCCTGAGTTG
ATGCCTTTGAGTCATGTGCTTGCAACATAGCTTGGTG
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