CB293047
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB293047 vs. ExPASy Swiss-Prot
Match: PATL1_ARATH (Patellin-1 OS=Arabidopsis thaliana GN=PATL1 PE=1 SV=2) HSP 1 Score: 131.339 bits (329), Expect = 3.866e-30 Identity = 63/102 (61.76%), Postives = 77/102 (75.49%), Query Frame = 1 Query: 1 GGLSTEGEPEFTTTDPVTEVVVKPPSKYTVEIPVTERSILVWELRVLGWDVSYGAEFVPNAEGSYTVIVSKTRKVAPTDEPVICDTFKIGEPGKVVLTIDNQ 306 GGLS + T + +TE +VKP + YT+E+P +E L WELRVLG DVSYGA+F P EGSY VIVSKTRK+ TDEPVI D+FK+GEPGK+V+TIDNQ Sbjct: 461 GGLSKDTP---LTEETITEAIVKPAANYTIELPASEACTLSWELRVLGADVSYGAQFEPTTEGSYAVIVSKTRKIGSTDEPVITDSFKVGEPGKIVITIDNQ 559
BLAST of CB293047 vs. ExPASy Swiss-Prot
Match: PATL2_ARATH (Patellin-2 OS=Arabidopsis thaliana GN=PATL2 PE=1 SV=2) HSP 1 Score: 129.413 bits (324), Expect = 1.469e-29 Identity = 68/102 (66.67%), Postives = 76/102 (74.51%), Query Frame = 1 Query: 1 GGLSTEGEPEFTTTDPVTEVVVKPPSKYTVEIPVTERSILVWELRVLGWDVSYGAEFVPNAEGSYTVIVSKTRKVAPTDEPVICDTFKIGEPGKVVLTIDNQ 306 GGLS + FT D VTE VVK SKYT+++P TE S L WELRVLG DVSYGA+F P+ E SYTVIVSK RKV TDEPVI D+FK E GKVV+TIDNQ Sbjct: 569 GGLSKDSP--FTVEDGVTEAVVKSTSKYTIDLPATEGSTLSWELRVLGADVSYGAQFEPSNEASYTVIVSKNRKVGLTDEPVITDSFKASEAGKVVITIDNQ 668
BLAST of CB293047 vs. ExPASy Swiss-Prot
Match: PATL3_ARATH (Patellin-3 OS=Arabidopsis thaliana GN=PATL3 PE=1 SV=2) HSP 1 Score: 115.161 bits (287), Expect = 2.867e-25 Identity = 54/104 (51.92%), Postives = 75/104 (72.12%), Query Frame = 1 Query: 1 GGLSTEG---EPEFTTTDPVTEVVVKPPSKYTVEIPVTERSILVWELRVLGWDVSYGAEFVPNAEGSYTVIVSKTRKVAPTDEPVICDTFKIGEPGKVVLTIDN 303 GGLS + P+F+ D +E+ VKP +K TVEI + E+ LVWE+RV GW+VSY AEFVP + +YTV++ K RK+ P+DEPV+ +FK+ E GKV+LT+DN Sbjct: 370 GGLSVDPCDCNPDFSLEDSASEITVKPGTKQTVEIIIYEKCELVWEIRVTGWEVSYKAEFVPEEKDAYTVVIQKPRKMRPSDEPVLTHSFKVNELGKVLLTVDN 473
BLAST of CB293047 vs. ExPASy Swiss-Prot
Match: PATL5_ARATH (Patellin-5 OS=Arabidopsis thaliana GN=PATL5 PE=1 SV=2) HSP 1 Score: 110.923 bits (276), Expect = 5.407e-24 Identity = 53/104 (50.96%), Postives = 73/104 (70.19%), Query Frame = 1 Query: 1 GGLSTEG---EPEFTTTDPVTEVVVKPPSKYTVEIPVTERSILVWELRVLGWDVSYGAEFVPNAEGSYTVIVSKTRKVAPTDEPVICDTFKIGEPGKVVLTIDN 303 GGLS + +FT D TE+ VKP +K TVEI V E+ +VWE+RV+GW+VSYGAEFVP + YTVI+ K RK+ +E V+ +FK+GE G+++LT+DN Sbjct: 545 GGLSVDNCECNSDFTHDDIATEITVKPTTKQTVEIIVYEKCTIVWEIRVVGWEVSYGAEFVPENKEGYTVIIQKPRKMTAKNELVVSHSFKVGEVGRILLTVDN 648
BLAST of CB293047 vs. ExPASy Swiss-Prot
Match: PATL4_ARATH (Patellin-4 OS=Arabidopsis thaliana GN=PATL4 PE=1 SV=2) HSP 1 Score: 97.4413 bits (241), Expect = 6.187e-20 Identity = 51/102 (50.00%), Postives = 69/102 (67.65%), Query Frame = 1 Query: 1 GGLSTEGEPEFTTTDPVTEVVVKPPSKYTVEIPVTE-RSILVWELRVLGWDVSYGAEFVPNAEGSYTVIVSKTRKVAPTDEPVICDTFKIGEPGKVVLTIDN 303 GG T + EF+ + V+EVVVKP S T+EIP E LVW++ VLGW+V+Y EFVP EG+YTVIV K +K+ + P I ++FK + GK+VLT+DN Sbjct: 421 GGFKTVDDTEFSN-ETVSEVVVKPGSSETIEIPAPETEGTLVWDIAVLGWEVNYKEEFVPTEEGAYTVIVQKVKKMGANEGP-IRNSFKNSQAGKIVLTVDN 520
BLAST of CB293047 vs. ExPASy Swiss-Prot
Match: PATL6_ARATH (Patellin-6 OS=Arabidopsis thaliana GN=PATL6 PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 7.826e-15 Identity = 40/102 (39.22%), Postives = 62/102 (60.78%), Query Frame = 1 Query: 1 GGLSTEGEPEFTTTDPVTEVVVKPPSKYTVEIPVTER-SILVWELRVLGWDVSYGAEFVPNAEGSYTVIVSKTRKVAPTDEPVICDTFKIGEPGKVVLTIDN 303 GGLS + + P +E +K K ++I E + + W++ V GWD+ Y AEFVPNAE SY ++V K +K+ TDE +C++F E GK++L++DN Sbjct: 287 GGLSRPTDSQNGPPKPASEFSIKGGEKVNIQIEGIEGGATITWDIVVGGWDLEYSAEFVPNAEESYAIVVEKPKKMKATDE-AVCNSFTTVEAGKLILSVDN 387 The following BLAST results are available for this feature:
BLAST of CB293047 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CB293047 ID=CB293047; Name=CB293047; organism=Citrus sinensis; type=EST; length=628bpback to top |