CB304686

Overview
NameCB304686
Unique NameCB304686
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length642
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9637 contig Csv1_Contig9637:75..716. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of CB304686 vs. ExPASy Swiss-Prot
Match: Y2416_ARATH (Uncharacterized protein At2g34160 OS=Arabidopsis thaliana GN=At2g34160 PE=1 SV=1)

HSP 1 Score: 203.371 bits (516), Expect = 8.418e-52
Identity = 103/130 (79.23%), Postives = 117/130 (90.00%), Query Frame = -1 
Query:  208 MEEITEGVNNMNLAVDANKKNRIQVSNTKKPLFFYVNLAKRYMQQHNEVELSALGMAIATVVTVAEILKNNGLAVEKKIMTSTVDMRDESRGRPVQKAKIEIWLEKTANFDELMAAAAEERDVGDGEEQS 597
            MEEIT+GVNNMNLA D+ KKNRIQVSNTKKPLFFYVNLAKRYMQQ+N+VELSALGMAIATVVTV EILKNNG AVEKKIMTSTVD++D++RGRPVQKAKIEI L K+  FDELMAAA EE++  + + Q+
Sbjct:    1 MEEITDGVNNMNLATDSQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNDVELSALGMAIATVVTVTEILKNNGFAVEKKIMTSTVDIKDDARGRPVQKAKIEITLVKSEKFDELMAAANEEKEDAEAQVQN 130
The following BLAST results are available for this feature:
BLAST of CB304686 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
Y2416_ARATH8.418e-5279.23Uncharacterized protein At2g34160 OS=Arabidopsis t... [more]
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Properties
Property NameValue
Genbank descriptionFLAVEDO0002_IIIaR_D10 Flavedo Mature Citrus sinensis cDNA clone FLAVEDO0002_IIIaR_D10 3, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB304686 ID=CB304686; Name=CB304686; organism=Citrus sinensis; type=EST; length=642bp
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAATACTAAATATGGTGTTT
CTACACTCTTATCATAAAATTCACAATTACAATACAAATTTAGGAGAATC
ATGAACGCAAAGCCAAAGATACCCCAATAATAAAAGAAAGTGACTAATTA
AGCGTTCACCAGTGCTAGAGCATTAAAAACCAGATACTAAAATCCAAACT
CATCTCAACTCTGTTCTTCACCATCGCCAACATCCCTCTCCTCGGCAGCA
GCAGCCATCAGTTCATCAAAGTTTGCTGTCTTCTCCAGCCATATTTCAAT
CTTGGCTTTCTGGACGGGTCGTCCTCGAGATTCATCCCTCATATCAACTG
TCGAGGTCATGATCTTCTTCTCAACAGCCAAACCATTGTTTTTCAGAATT
TCAGCGACTGTGACAACTGTGGCAATAGCCATTCCAAGGGCAGAGAGCTC
CACCTCATTGTGCTGCTGCATATACCTCTTCGCTAGATTGACGTAGAAAA
ACAAGGGCTTCTTGGTATTAGAAACCTGAATTCGATTCTTCTTGTTTGCA
TCTACGGCCAAGTTCATGTTGTTTACTCCCTCTGTAATTTCTTCCATTTT
AGAACTTATTACCCAAAACCCTAATTCTTAGATTTCTCTGTT
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