CB304979
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB304979 vs. ExPASy Swiss-Prot
Match: AGL9_PETHY (Agamous-like MADS-box protein AGL9 homolog OS=Petunia hybrida GN=FBP2 PE=1 SV=2) HSP 1 Score: 145.976 bits (367), Expect = 1.413e-34 Identity = 76/109 (69.72%), Postives = 85/109 (77.98%), Query Frame = -2 Query: 278 MSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLMEGYQVNTLQLNPSAEDCGYGLKPAQPQGDSFFHALECEPTLQIGYQPADPISVVTAGPSLNNYMQGWLP 604 MSLKQIRSTRTQ MLD L +LQ KE L+EAN+TLKQRLMEG +N LQ +A+D GYG + Q QGD FFH LECEPTLQIGYQ DPI+V AGPS+NNYM GWLP Sbjct: 135 MSLKQIRSTRTQLMLDQLQDLQRKEHALNEANRTLKQRLMEGSTLN-LQWQQNAQDVGYGRQATQTQGDGFFHPLECEPTLQIGYQ-NDPITVGGAGPSVNNYMAGWLP 241
BLAST of CB304979 vs. ExPASy Swiss-Prot
Match: MTF1_PEA (MADS-box transcription factor 1 OS=Pisum sativum GN=MTF1 PE=2 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 3.481e-33 Identity = 75/111 (67.57%), Postives = 83/111 (74.77%), Query Frame = -2 Query: 278 SLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLMEGYQVNTLQLNPSAEDCGYGLK-PAQPQGDSFFHA--LECEPTLQIGYQPADPISVVTAGPSLNNYMQGWLP 601 SLKQIRSTRTQ+MLD L +LQ KE LL EAN+ L+QR MEGYQ+N+LQLN SAED GYG GD F +ECEPTLQIGY DP SVVTAGPS+NNYM GWLP Sbjct: 138 SLKQIRSTRTQFMLDQLGDLQRKEHLLCEANRALRQR-MEGYQINSLQLNLSAEDMGYGRHHQGHTHGDELFQVQPIECEPTLQIGYHQGDPGSVVTAGPSMNNYMGGWLP 247
BLAST of CB304979 vs. ExPASy Swiss-Prot
Match: AGL9_ARADE (Agamous-like MADS-box protein AGL9 homolog OS=Aranda deborah PE=2 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 1.326e-24 Identity = 62/110 (56.36%), Postives = 78/110 (70.91%), Query Frame = -2 Query: 281 SLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLMEGYQVNTLQL-NPS-AEDCGYGLKPAQPQGDSFFHALECEPTLQIGYQPADPISVVTAGPSLNNYM-QGWL 601 SL+QIRSTRTQ+MLD L +LQ +EQ+L EANKTLK+R E Q N Q+ +PS GYG +PAQ G++F+H LECEPTLQIGY ++ TA ++NNYM GWL Sbjct: 134 SLRQIRSTRTQFMLDQLADLQRREQMLCEANKTLKRRFEESSQANQQQVWDPSNTHAVGYGRQPAQHHGEAFYHPLECEPTLQIGYHSDITMATATAS-TVNNYMPPGWL 242
BLAST of CB304979 vs. ExPASy Swiss-Prot
Match: SEP3_ARATH (Developmental protein SEPALLATA 3 OS=Arabidopsis thaliana GN=SEP3 PE=1 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 3.857e-24 Identity = 63/111 (56.76%), Postives = 77/111 (69.37%), Query Frame = -2 Query: 278 SLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLMEGYQVNTLQLNPSAEDCG-YGLKPAQPQ--GDSFFHALECEPTLQIGYQPADPISVVTAGPSLNNYMQGWLP 601 SLKQIR+ RTQ+MLD L +LQ KE++L+E NKTL+ RL +GYQ+ LQLNP+ E+ YG Q Q +FF LECEP LQIGYQ + AGPS+NNYM GWLP Sbjct: 138 SLKQIRALRTQFMLDQLNDLQSKERMLTETNKTLRLRLADGYQM-PLQLNPNQEEVDHYGRHHHQQQQHSQAFFQPLECEPILQIGYQGQQ--DGMGAGPSVNNYMLGWLP 245
BLAST of CB304979 vs. ExPASy Swiss-Prot
Match: AGL9_SINAL (Agamous-like MADS-box protein AGL9 homolog OS=Sinapis alba GN=AGL9 PE=2 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 3.857e-24 Identity = 64/113 (56.64%), Postives = 77/113 (68.14%), Query Frame = -2 Query: 278 SLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLMEGYQVNTLQLNPSAED--CGYGLKPAQPQGDS---FFHALECEPTLQIGYQPADPISVVTAGPSLNNYMQGWLP 601 SLKQIR+ RTQ+MLD L +LQ KE++L+E NKTL+ RL +GYQ+ LQLNP+ ED YG Q Q +S FF LECEP LQ+GYQ + AGPS NNYM GWLP Sbjct: 138 SLKQIRALRTQFMLDQLNDLQSKERMLNETNKTLRLRLADGYQM-PLQLNPNQEDHHVDYGRHDQQQQQNSHHAFFQPLECEPILQMGYQGQQDHG-MEAGPSENNYMLGWLP 248
BLAST of CB304979 vs. ExPASy Swiss-Prot
Match: MADS7_ORYSJ (MADS-box transcription factor 7 OS=Oryza sativa subsp. japonica GN=MADS7 PE=1 SV=2) HSP 1 Score: 81.6481 bits (200), Expect = 3.273e-15 Identity = 50/115 (43.48%), Postives = 70/115 (60.87%), Query Frame = -2 Query: 278 SLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLMEGYQVNTLQL-NPSAEDCGYGLKPAQPQ----GDSFFHALEC--EPTLQIGYQPADPISVVTAGPSLNNYMQGWLP 601 SLK +R+TRT++++D LTELQ KEQ++SEAN+ L+++L E V Q+ GY +P Q G+ FFH L+ EPTLQIGY PA+ + + +N YM WLP Sbjct: 137 SLKHVRTTRTKHLVDQLTELQRKEQMVSEANRCLRRKLEESNHVRGQQVWEQGCNLIGYERQPEVQQPLHGGNGFFHPLDAAGEPTLQIGY-PAEHHEAMNSA-CMNTYMPPWLP 249
BLAST of CB304979 vs. ExPASy Swiss-Prot
Match: MADS7_ORYSI (MADS-box transcription factor 7 OS=Oryza sativa subsp. indica GN=MADS7 PE=2 SV=2) HSP 1 Score: 81.6481 bits (200), Expect = 3.273e-15 Identity = 50/115 (43.48%), Postives = 70/115 (60.87%), Query Frame = -2 Query: 278 SLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLMEGYQVNTLQL-NPSAEDCGYGLKPAQPQ----GDSFFHALEC--EPTLQIGYQPADPISVVTAGPSLNNYMQGWLP 601 SLK +R+TRT++++D LTELQ KEQ++SEAN+ L+++L E V Q+ GY +P Q G+ FFH L+ EPTLQIGY PA+ + + +N YM WLP Sbjct: 137 SLKHVRTTRTKHLVDQLTELQRKEQMVSEANRCLRRKLEESNHVRGQQVWEQGCNLIGYERQPEVQQPLHGGNGFFHPLDAAGEPTLQIGY-PAEHHEAMNSA-CMNTYMPPWLP 249
BLAST of CB304979 vs. ExPASy Swiss-Prot
Match: AGL9_SOLLC (Agamous-like MADS-box protein AGL9 homolog OS=Solanum lycopersicum GN=TDR5 PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 4.691e-15 Identity = 35/46 (76.09%), Postives = 39/46 (84.78%), Query Frame = -2 Query: 467 MSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLMEGYQVN 604 MSLKQIRSTRTQ MLD LT+ Q KE L+EAN+TLKQRLMEG Q+N Sbjct: 135 MSLKQIRSTRTQLMLDQLTDYQRKEHALNEANRTLKQRLMEGSQLN 180 HSP 2 Score: 31.187 bits (69), Expect = 4.691e-15 Identity = 16/31 (51.61%), Postives = 19/31 (61.29%), Query Frame = -3 Query: 355 VQKIVVMGLNQLNLRAIASFTPWNVNPHCKL 447 + K+ M QL LRA+ASF W VN CKL Sbjct: 186 MHKLWAMAGKQLKLRAMASFILWIVNLLCKL 216
BLAST of CB304979 vs. ExPASy Swiss-Prot
Match: MADS8_ORYSJ (MADS-box transcription factor 8 OS=Oryza sativa subsp. japonica GN=MADS8 PE=1 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 2.771e-14 Identity = 53/118 (44.92%), Postives = 69/118 (58.47%), Query Frame = -2 Query: 278 SLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLMEGYQVNTLQLNPSAEDCGY------GLKPAQPQ-GDSFFHALE--CEPTLQIGYQPAD-PISVVTAGPSLNNYMQGWLP 601 SL+ IRSTRTQ+MLD LT+LQ +EQ+L EANK L+++L E Q++ A GY ++ P G+ FFH+LE EPTLQIG+ P S VTA +M WLP Sbjct: 137 SLRHIRSTRTQHMLDQLTDLQRREQMLCEANKCLRRKLEESNQLHGQVWEHGATLLGYERQSPHAVQQVPPHGGNGFFHSLEAAAEPTLQIGFTPEQMNNSCVTA------FMPTWLP 248
BLAST of CB304979 vs. ExPASy Swiss-Prot
Match: SEP2_ARATH (Developmental protein SEPALLATA 2 OS=Arabidopsis thaliana GN=SEP2 PE=1 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 1.986e-12 Identity = 45/117 (38.46%), Postives = 65/117 (55.56%), Query Frame = -2 Query: 281 SLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLMEGYQVNTLQLNPSAE-----DCGYGLKPAQPQGDSFFHALECEPTLQIGYQP---ADPISVVTAGPSL--NNYMQGWL 601 SLKQ+R +TQYMLD L++LQ KE +L +AN+ L +L + V + E + YG A QG + +LEC+PTLQIGY ++ ++V G S N Y+ GW+ Sbjct: 135 SLKQVRCIKTQYMLDQLSDLQGKEHILLDANRALSMKLEDMIGVRHHHIGGGWEGGDQQNIAYGHPQAHSQG--LYQSLECDPTLQIGYSHPVCSEQMAVTVQGQSQQGNGYIPGWM 249 The following BLAST results are available for this feature:
BLAST of CB304979 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 12
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CB304979 ID=CB304979; Name=CB304979; organism=Citrus sinensis; type=EST; length=605bpback to top |