CB322204

Overview
NameCB322204
Unique NameCB322204
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length442
Libraries
Library NameType
Mature leaf blade cDNA subtraction librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6873 contig Csv1_Contig6873:278..719. BLAST: Citrus Unigene V1 Contigs to Populus V2 proteins
Homology
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BLAST of CB322204 vs. ExPASy Swiss-Prot
Match: ART2_YEAST (Uncharacterized protein ART2 OS=Saccharomyces cerevisiae GN=ART2 PE=4 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 2.774e-17
Identity = 42/52 (80.77%), Postives = 43/52 (82.69%), Query Frame = 1 
Query:    1 TENQNQTSFYPFVPHEISVLVELILGHLRYLLTDVPPQPNSPPDNVFRPDRP 156
            TENQNQ  FYPFV  EISVL E  LGHLRY LTDVPPQPNSPPDNVF PD+P
Sbjct:    6 TENQNQGGFYPFVLLEISVLHEPPLGHLRYRLTDVPPQPNSPPDNVFNPDQP 57
[Close]
BLAST of CB322204 vs. ExPASy Swiss-Prot
Match: YL62A_YEAST (Uncharacterized protein YLR162W-A OS=Saccharomyces cerevisiae GN=YLR162W-A PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 1.333e-11
Identity = 34/42 (80.95%), Postives = 34/42 (80.95%), Query Frame = 1 
Query:    1 TENQNQTSFYPFVPHEISVLVELILGHLRYLLTDVPPQPNSP 126
            TENQNQ  FYPFV  EISVL E  LGHLRY LTDVPPQPNSP
Sbjct:    6 TENQNQGDFYPFVLLEISVLHESPLGHLRYRLTDVPPQPNSP 47
The following BLAST results are available for this feature:
BLAST of CB322204 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
ART2_YEAST2.774e-1780.77Uncharacterized protein ART2 OS=Saccharomyces cere... [more]
YL62A_YEAST1.333e-1180.95Uncharacterized protein YLR162W-A OS=Saccharomyces... [more]
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Properties
Property NameValue
Genbank descriptionEST0328 Mature leaf blade cDNA subtraction library Citrus sinensis cDNA clone 24LB341 similar to unpecific monooxygenase (acc# T02995), mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB322204 ID=CB322204; Name=CB322204; organism=Citrus sinensis; type=EST; length=442bp
ACTGAAAATCAGAATCAAACGAGCTTTTACCCTTTTGTTCCACACGAGAT
TTCTGTTCTCGTTGAGCTCATCTTAGGACACCTGCGTTATCTTTTAACAG
ATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCCGCCCGGAT
CGACCCCCGTGAGGGGGCCTTGGGTCCAAAAAGAGGGGCAGTGCCCCGCC
TCCGATTCACGGAATAAGTAAAATAACGTTAAAAGTAGTGGTATTTCACT
TTCGCCGTTTCCGGCTCCCACTTATACTACACCTCTCAAGTCATTTCACA
AAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCT
GCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGATAGTAGACAGGGACA
GTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGA
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