CB322223

Overview
NameCB322223
Unique NameCB322223
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length410
Libraries
Library NameType
Mature leaf blade cDNA subtraction librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1703 contig Csv1_Contig1703:242..651. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB322223 vs. ExPASy Swiss-Prot
Match: KMCP1_MACFA (Kidney mitochondrial carrier protein 1 OS=Macaca fascicularis GN=SLC25A30 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 2.045e-16
Identity = 46/106 (43.40%), Postives = 62/106 (58.49%), Query Frame = 3
Query:    3 DQVKEMILKKGVMRDGLGTHVTXXXXXXXXXXXXXNPVDVIKTRVMNMTV-EAGRDPPYKGALDCALKTVRAEGPMALYKGFIPTISRQGPFTVVLFVTLEQVRKL 317
            D  K+ ++  G+M D + TH               NPVDV++TR+MN  V + GR   Y G LDC L+T + EG  ALYKGF P   R GP+ ++LFVT EQ++KL
Sbjct:  184 DITKKHLILSGLMGDTVYTHFLSSFTCGLAGALASNPVDVVRTRMMNQRVLQDGRCSGYTGTLDCLLQTWKNEGFFALYKGFWPNWLRLGPWNIILFVTYEQLKKL 289          
BLAST of CB322223 vs. ExPASy Swiss-Prot
Match: M2OM_DICDI (Probable mitochondrial 2-oxoglutarate/malate carrier protein OS=Dictyostelium discoideum GN=ucpC PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 3.489e-16
Identity = 43/108 (39.81%), Postives = 59/108 (54.63%), Query Frame = 3
Query:    3 DQVKEMILKKGVMRDGLGTHVTXXXXXXXXXXXXXNPVDVIKTRVMNMTVEAGRDPPYKGALDCALKTVRAEGPMALYKGFIPTISRQGPFTVVLFVTLEQVRKLLKE 326
            DQ K+++L  G   D + TH+              +P+DVIKTR+MN       +  YKG  DC  KT+RAEG  A YKGF P   R GP T++ F+ +EQ+  L K+
Sbjct:  205 DQTKQLMLASGYFHDDIKTHLIASTTAAFVAAVATSPLDVIKTRIMNSPKTVTGELQYKGTFDCLSKTLRAEGFKAFYKGFNPYFMRLGPQTILTFIFVEQLNILWKK 312          
BLAST of CB322223 vs. ExPASy Swiss-Prot
Match: KMCP1_MOUSE (Kidney mitochondrial carrier protein 1 OS=Mus musculus GN=Slc25a30 PE=1 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 3.489e-16
Identity = 44/106 (41.51%), Postives = 61/106 (57.55%), Query Frame = 3
Query:    3 DQVKEMILKKGVMRDGLGTHVTXXXXXXXXXXXXXNPVDVIKTRVMNM-TVEAGRDPPYKGALDCALKTVRAEGPMALYKGFIPTISRQGPFTVVLFVTLEQVRKL 317
            D  K+ ++  G+M D + TH               NPVDV++TR+MN   +  GR   YKG LDC L+T + EG  ALYKGF P   R GP+ ++ F+T EQ++KL
Sbjct:  184 DITKKHLILSGLMGDTVATHFLSSFTCGLVGALASNPVDVVRTRMMNQRALRDGRCAGYKGTLDCLLQTWKNEGFFALYKGFWPNWLRLGPWNIIFFLTYEQLKKL 289          
BLAST of CB322223 vs. ExPASy Swiss-Prot
Match: KMCP1_RAT (Kidney mitochondrial carrier protein 1 OS=Rattus norvegicus GN=Slc25a30 PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 4.556e-16
Identity = 44/106 (41.51%), Postives = 61/106 (57.55%), Query Frame = 3
Query:    3 DQVKEMILKKGVMRDGLGTHVTXXXXXXXXXXXXXNPVDVIKTRVMNMT-VEAGRDPPYKGALDCALKTVRAEGPMALYKGFIPTISRQGPFTVVLFVTLEQVRKL 317
            D  K+ ++  G+M D + TH               NPVDV++TR+MN   +  GR   YKG LDC L+T + EG  ALYKGF P   R GP+ ++ F+T EQ++KL
Sbjct:  184 DITKKHLILSGLMGDTVSTHFLSSFTCGLVGALASNPVDVVRTRMMNQRDLRDGRCSGYKGTLDCLLQTWKNEGFFALYKGFWPNWLRLGPWNIIFFLTYEQLKKL 289          
BLAST of CB322223 vs. ExPASy Swiss-Prot
Match: KMCP1_HUMAN (Kidney mitochondrial carrier protein 1 OS=Homo sapiens GN=SLC25A30 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 1.015e-15
Identity = 45/106 (42.45%), Postives = 60/106 (56.60%), Query Frame = 3
Query:    3 DQVKEMILKKGVMRDGLGTHVTXXXXXXXXXXXXXNPVDVIKTRVMNMTV-EAGRDPPYKGALDCALKTVRAEGPMALYKGFIPTISRQGPFTVVLFVTLEQVRKL 317
            D  K+ ++  G+M D + TH               NPVDV++TR+MN  V   GR   Y G LDC L+T + EG  ALYKGF P   R GP+ ++ FVT EQ++KL
Sbjct:  184 DITKKHLILSGLMGDTVYTHFLSSFTCGLAGALASNPVDVVRTRMMNQRVLRDGRCSGYTGTLDCLLQTWKNEGFFALYKGFWPNWLRLGPWNIIFFVTYEQLKKL 289          
BLAST of CB322223 vs. ExPASy Swiss-Prot
Match: KMCP1_XENLA (Kidney mitochondrial carrier protein 1 OS=Xenopus laevis GN=slc25a30 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 1.326e-15
Identity = 42/106 (39.62%), Postives = 61/106 (57.55%), Query Frame = 3
Query:    3 DQVKEMILKKGVMRDGLGTHVTXXXXXXXXXXXXXNPVDVIKTRVMNM-TVEAGRDPPYKGALDCALKTVRAEGPMALYKGFIPTISRQGPFTVVLFVTLEQVRKL 317
            D  K+ ++  G+M D + TH               NPVDV++TR+MN  ++    +  YKG LDC L+T + EG  ALYKGF P   R GP+ ++ F+T EQ++KL
Sbjct:  184 DITKKHLILSGLMGDTVYTHFLSSFTCGLAGALASNPVDVVRTRMMNQRSIRDASNSSYKGTLDCLLQTWKNEGFFALYKGFWPNWLRLGPWNIIFFITYEQLKKL 289          
BLAST of CB322223 vs. ExPASy Swiss-Prot
Match: KMCP1_XENTR (Kidney mitochondrial carrier protein 1 OS=Xenopus tropicalis GN=slc25a30 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 2.953e-15
Identity = 42/106 (39.62%), Postives = 61/106 (57.55%), Query Frame = 3
Query:    3 DQVKEMILKKGVMRDGLGTHVTXXXXXXXXXXXXXNPVDVIKTRVMNM-TVEAGRDPPYKGALDCALKTVRAEGPMALYKGFIPTISRQGPFTVVLFVTLEQVRKL 317
            D  K+ ++  G+M D + TH               NPVDV++TR+MN  ++    +  YKG LDC L+T + EG  ALYKGF P   R GP+ ++ F+T EQ++KL
Sbjct:  184 DITKKHLILSGLMGDTVYTHFLASFTCGLAGALASNPVDVVRTRMMNQRSIRNVSNSSYKGTLDCLLQTWKNEGFFALYKGFWPNWLRLGPWNIIFFITYEQLKKL 289          
BLAST of CB322223 vs. ExPASy Swiss-Prot
Match: UCPB_DICDI (Mitochondrial substrate carrier family protein ucpB OS=Dictyostelium discoideum GN=ucpB PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 8.593e-15
Identity = 42/107 (39.25%), Postives = 61/107 (57.01%), Query Frame = 3
Query:    3 DQVKEMILKKGVMR-DGLGTHVTXXXXXXXXXXXXXNPVDVIKTRVMNMTVEA-GRDPPYKGALDCALKTVRAEGPMALYKGFIPTISRQGPFTVVLFVTLEQVRKL 317
            D +K MIL  G+++ DGL  H+              +PVD++KTR+MN   ++ G    YK + DC  KT ++EG   LYKGF+P   R GP T+V F+  E +RK+
Sbjct:  182 DHIKHMILDHGIIQVDGLQVHIVSSIFAGLIASITTSPVDLVKTRIMNQPFDSNGVGLIYKSSYDCFKKTFQSEGISGLYKGFLPNWFRIGPHTIVTFILYEYLRKV 288          
BLAST of CB322223 vs. ExPASy Swiss-Prot
Match: UCP2_RAT (Mitochondrial uncoupling protein 2 OS=Rattus norvegicus GN=Ucp2 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 1.122e-14
Identity = 43/106 (40.57%), Postives = 58/106 (54.72%), Query Frame = 3
Query:    3 DQVKEMILKKGVMRDGLGTHVTXXXXXXXXXXXXXNPVDVIKTRVMNMTVEAGRDPPYKGALDCALKTVRAEGPMALYKGFIPTISRQGPFTVVLFVTLEQVRKLL 320
            D +K+ +LK  +M D L  H T             +PVDV+KTR MN  +       Y  A  CAL  +R EGP A YKGF+P+  R G + VV+FVT EQ+++ L
Sbjct:  198 DLIKDTLLKANLMTDDLPCHFTSAFGAGFCTTVIASPVDVVKTRYMNSALGQ-----YHSAGHCALTMLRKEGPRAFYKGFMPSFLRLGSWNVVMFVTYEQLKRAL 298          
BLAST of CB322223 vs. ExPASy Swiss-Prot
Match: UCP2_MOUSE (Mitochondrial uncoupling protein 2 OS=Mus musculus GN=Ucp2 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 1.122e-14
Identity = 43/106 (40.57%), Postives = 58/106 (54.72%), Query Frame = 3
Query:    3 DQVKEMILKKGVMRDGLGTHVTXXXXXXXXXXXXXNPVDVIKTRVMNMTVEAGRDPPYKGALDCALKTVRAEGPMALYKGFIPTISRQGPFTVVLFVTLEQVRKLL 320
            D +K+ +LK  +M D L  H T             +PVDV+KTR MN  +       Y  A  CAL  +R EGP A YKGF+P+  R G + VV+FVT EQ+++ L
Sbjct:  198 DLIKDTLLKANLMTDDLPCHFTSAFGAGFCTTVIASPVDVVKTRYMNSALGQ-----YHSAGHCALTMLRKEGPRAFYKGFMPSFLRLGSWNVVMFVTYEQLKRAL 298          
The following BLAST results are available for this feature:
BLAST of CB322223 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 36
Match NameE-valueIdentityDescription
KMCP1_MACFA2.045e-1643.40Kidney mitochondrial carrier protein 1 OS=Macaca f... [more]
M2OM_DICDI3.489e-1639.81Probable mitochondrial 2-oxoglutarate/malate carri... [more]
KMCP1_MOUSE3.489e-1641.51Kidney mitochondrial carrier protein 1 OS=Mus musc... [more]
KMCP1_RAT4.556e-1641.51Kidney mitochondrial carrier protein 1 OS=Rattus n... [more]
KMCP1_HUMAN1.015e-1542.45Kidney mitochondrial carrier protein 1 OS=Homo sap... [more]
KMCP1_XENLA1.326e-1539.62Kidney mitochondrial carrier protein 1 OS=Xenopus ... [more]
KMCP1_XENTR2.953e-1539.62Kidney mitochondrial carrier protein 1 OS=Xenopus ... [more]
UCPB_DICDI8.593e-1539.25Mitochondrial substrate carrier family protein ucp... [more]
UCP2_RAT1.122e-1440.57Mitochondrial uncoupling protein 2 OS=Rattus norve... [more]
UCP2_MOUSE1.122e-1440.57Mitochondrial uncoupling protein 2 OS=Mus musculus... [more]

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Properties
Property NameValue
Genbank descriptionEST0348 Mature leaf blade cDNA subtraction library Citrus sinensis cDNA clone 24LB364 similar to mitochondrial dicarboxylate carrier protein (acc# AAM63236), mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB322223 ID=CB322223; Name=CB322223; organism=Citrus sinensis; type=EST; length=410bp
ACGATCAGGTGAAGGAGATGATTCTGAAGAAGGGGGTGATGAGGGACGGA
CTGGGGACGCACGTGACGGCGAGTTTTGCGGCGGGGTTTGTGGCGTCGGT
GGCGTCGAATCCGGTGGACGTGATTAAGACGAGGGTCATGAATATGACCG
TTGAGGCTGGGAGGGACCCACCGTATAAGGGGGCCTTAGATTGCGCGTTG
AAGACAGTGAGAGCTGAAGGGCCCATGGCCCTTTATAAAGGGTTCATTCC
AACCATTTCGAGGCAGGGCCCTTTCACTGTAGTGTTGTTTGTGACATTAG
AGCAAGTGAGGAAGCTGCTCAAAGAGTTTTGATTATTTTCGGACGATGAT
AATAAAGTTAAAACGAGGCAAATTTAATGTTATTATTGTAACTGTTAGCA
GTTGTTTCGG
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