CB322235

Overview
NameCB322235
Unique NameCB322235
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length197
Libraries
Library NameType
Mature leaf blade cDNA subtraction librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB322235 vs. ExPASy Swiss-Prot
Match: ACO12_ARATH (Putative peroxisomal acyl-coenzyme A oxidase 1.2 OS=Arabidopsis thaliana GN=ACX1.2 PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 1.201e-24
Identity = 51/65 (78.46%), Postives = 59/65 (90.77%), Query Frame = 2
Query:    2 QLRGLEDHSPHPGITIGDIGMKFGNGAYNTMDNGVLRFEHVRIPRNQMLMRVSQVTREGKYVQSN 196
            QLR L+DHSP PGIT+GDIGMKFGNGAYN+MDNG L F+H RIPR+QMLMR+S+VTREGKYV S+
Sbjct:  207 QLRSLDDHSPLPGITVGDIGMKFGNGAYNSMDNGFLMFDHFRIPRDQMLMRLSKVTREGKYVASD 271          
BLAST of CB322235 vs. ExPASy Swiss-Prot
Match: ACOX1_ARATH (Peroxisomal acyl-coenzyme A oxidase 1 OS=Arabidopsis thaliana GN=ACX1 PE=1 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 5.046e-23
Identity = 49/65 (75.38%), Postives = 57/65 (87.69%), Query Frame = 2
Query:    2 QLRGLEDHSPHPGITIGDIGMKFGNGAYNTMDNGVLRFEHVRIPRNQMLMRVSQVTREGKYVQSN 196
            QLR LEDHSP P IT+GDIG K GNGAYN+MDNG L F+HVRIPR+QMLMR+S+VTREG+YV S+
Sbjct:  207 QLRSLEDHSPLPNITVGDIGTKMGNGAYNSMDNGFLMFDHVRIPRDQMLMRLSKVTREGEYVPSD 271          
BLAST of CB322235 vs. ExPASy Swiss-Prot
Match: ACOX1_DICDI (Peroxisomal acyl-coenzyme A oxidase 1 OS=Dictyostelium discoideum GN=acox1 PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 1.246e-13
Identity = 34/61 (55.74%), Postives = 45/61 (73.77%), Query Frame = 2
Query:    2 QLRGLEDHSPHPGITIGDIGMKFGNGAYNTMDNGVLRFEHVRIPRNQMLMRVSQVTREGKY 184
            Q+R L+DHSP PG+T+GDIG K G   +N++DNG LR +HVRIPR  ML R  +V  +G+Y
Sbjct:  222 QVRSLDDHSPLPGVTVGDIGPKLG---FNSIDNGFLRLDHVRIPRENMLSRFFRVNEQGEY 279          
BLAST of CB322235 vs. ExPASy Swiss-Prot
Match: ACOX2_MOUSE (Peroxisomal acyl-coenzyme A oxidase 2 OS=Mus musculus GN=Acox2 PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 5.234e-12
Identity = 32/60 (53.33%), Postives = 41/60 (68.33%), Query Frame = 2
Query:    5 LRGLEDHSPHPGITIGDIGMKFGNGAYNTMDNGVLRFEHVRIPRNQMLMRVSQVTREGKY 184
            +R LEDH+P PGIT+GDIG K G   +  +DNG LR  HVR+PR  ML R ++V  +G Y
Sbjct:  224 IRSLEDHTPLPGITVGDIGPKMG---FENIDNGFLRLNHVRVPRENMLSRFAEVLPDGTY 280          
BLAST of CB322235 vs. ExPASy Swiss-Prot
Match: ACOX2_RABIT (Peroxisomal acyl-coenzyme A oxidase 2 OS=Oryctolagus cuniculus GN=ACOX2 PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 1.166e-11
Identity = 32/62 (51.61%), Postives = 43/62 (69.35%), Query Frame = 2
Query:    5 LRGLEDHSPHPGITIGDIGMKFGNGAYNTMDNGVLRFEHVRIPRNQMLMRVSQVTREGKYVQ 190
            +R L+DH+P PGITIGDIG K G      +DNG L+ +HVR+PR  ML R +QV  +G Y++
Sbjct:  224 VRSLQDHTPLPGITIGDIGPKMG---LQHIDNGFLKMDHVRVPRENMLSRFAQVLPDGAYIK 282          
BLAST of CB322235 vs. ExPASy Swiss-Prot
Match: ACOX1_BOVIN (Peroxisomal acyl-coenzyme A oxidase 1 OS=Bos taurus GN=ACOX1 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 2.598e-11
Identity = 33/62 (53.23%), Postives = 43/62 (69.35%), Query Frame = 2
Query:    5 LRGLEDHSPHPGITIGDIGMKFGNGAYNTMDNGVLRFEHVRIPRNQMLMRVSQVTREGKYVQ 190
            +R L  H P PGIT+GDIG KFG   Y+ MDNG L+ ++ RIPR  MLM+ +QV  +G YV+
Sbjct:  209 IRELGTHKPLPGITVGDIGPKFG---YDEMDNGYLKMDNYRIPRENMLMKHAQVKPDGTYVK 267          
BLAST of CB322235 vs. ExPASy Swiss-Prot
Match: ACOX1_RAT (Peroxisomal acyl-coenzyme A oxidase 1 OS=Rattus norvegicus GN=Acox1 PE=1 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 3.393e-11
Identity = 32/62 (51.61%), Postives = 42/62 (67.74%), Query Frame = 2
Query:    5 LRGLEDHSPHPGITIGDIGMKFGNGAYNTMDNGVLRFEHVRIPRNQMLMRVSQVTREGKYVQ 190
            +R +  H P PGIT+GDIG KFG   Y  MDNG L+ ++ RIPR  MLM+ +QV  +G YV+
Sbjct:  209 IREIGTHKPLPGITVGDIGPKFG---YEEMDNGYLKMDNYRIPRENMLMKYAQVKPDGTYVK 267          
BLAST of CB322235 vs. ExPASy Swiss-Prot
Match: ACOX1_MOUSE (Peroxisomal acyl-coenzyme A oxidase 1 OS=Mus musculus GN=Acox1 PE=1 SV=4)

HSP 1 Score: 67.0106 bits (162), Expect = 3.393e-11
Identity = 32/62 (51.61%), Postives = 42/62 (67.74%), Query Frame = 2
Query:    5 LRGLEDHSPHPGITIGDIGMKFGNGAYNTMDNGVLRFEHVRIPRNQMLMRVSQVTREGKYVQ 190
            +R +  H P PGIT+GDIG KFG   Y  MDNG L+ ++ RIPR  MLM+ +QV  +G YV+
Sbjct:  209 IREIGTHKPLPGITVGDIGPKFG---YEEMDNGYLKMDNYRIPRENMLMKYAQVKPDGTYVK 267          
BLAST of CB322235 vs. ExPASy Swiss-Prot
Match: ACOX1_CAVPO (Peroxisomal acyl-coenzyme A oxidase 1 OS=Cavia porcellus GN=ACOX1 PE=2 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 3.393e-11
Identity = 32/62 (51.61%), Postives = 42/62 (67.74%), Query Frame = 2
Query:    5 LRGLEDHSPHPGITIGDIGMKFGNGAYNTMDNGVLRFEHVRIPRNQMLMRVSQVTREGKYVQ 190
            +R +  H P PGIT+GDIG KFG   Y  MDNG L+ ++ RIPR  MLM+ +QV  +G YV+
Sbjct:  209 IREIGTHKPLPGITVGDIGPKFG---YEEMDNGYLKMDNYRIPRENMLMKYAQVKPDGTYVK 267          
BLAST of CB322235 vs. ExPASy Swiss-Prot
Match: ACOX2_RAT (Peroxisomal acyl-coenzyme A oxidase 2 OS=Rattus norvegicus GN=Acox2 PE=1 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 7.558e-11
Identity = 31/60 (51.67%), Postives = 40/60 (66.67%), Query Frame = 2
Query:    5 LRGLEDHSPHPGITIGDIGMKFGNGAYNTMDNGVLRFEHVRIPRNQMLMRVSQVTREGKY 184
            +R LEDH+P PGIT+GDIG K G      +DNG L+  HVR+PR  ML R ++V  +G Y
Sbjct:  224 IRSLEDHTPLPGITVGDIGPKMG---LEHIDNGFLQLNHVRVPRENMLSRFAEVLPDGTY 280          
The following BLAST results are available for this feature:
BLAST of CB322235 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 12
Match NameE-valueIdentityDescription
ACO12_ARATH1.201e-2478.46Putative peroxisomal acyl-coenzyme A oxidase 1.2 O... [more]
ACOX1_ARATH5.046e-2375.38Peroxisomal acyl-coenzyme A oxidase 1 OS=Arabidops... [more]
ACOX1_DICDI1.246e-1355.74Peroxisomal acyl-coenzyme A oxidase 1 OS=Dictyoste... [more]
ACOX2_MOUSE5.234e-1253.33Peroxisomal acyl-coenzyme A oxidase 2 OS=Mus muscu... [more]
ACOX2_RABIT1.166e-1151.61Peroxisomal acyl-coenzyme A oxidase 2 OS=Oryctolag... [more]
ACOX1_BOVIN2.598e-1153.23Peroxisomal acyl-coenzyme A oxidase 1 OS=Bos tauru... [more]
ACOX1_RAT3.393e-1151.61Peroxisomal acyl-coenzyme A oxidase 1 OS=Rattus no... [more]
ACOX1_MOUSE3.393e-1151.61Peroxisomal acyl-coenzyme A oxidase 1 OS=Mus muscu... [more]
ACOX1_CAVPO3.393e-1151.61Peroxisomal acyl-coenzyme A oxidase 1 OS=Cavia por... [more]
ACOX2_RAT7.558e-1151.67Peroxisomal acyl-coenzyme A oxidase 2 OS=Rattus no... [more]

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Properties
Property NameValue
Genbank descriptionEST0361 Mature leaf blade cDNA subtraction library Citrus sinensis cDNA clone 24LB379 similar to acyl-CoA oxidase (acc# AAL01888), mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB322235 ID=CB322235; Name=CB322235; organism=Citrus sinensis; type=EST; length=197bp
ACAGCTCCGAGGCTTGGAAGATCACTCACCTCATCCCGGCATAACCATTG
GTGATATTGGAATGAAGTTTGGAAATGGAGCGTATAACACCATGGACAAT
GGTGTTTTGAGATTTGAACATGTGCGCATCCCTAGGAATCAAATGTTGAT
GCGGGTTTCACAGGTAACAAGGGAAGGGAAGTATGTGCAATCTAATG
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