CB417349

Overview
NameCB417349
Unique NameCB417349
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length638
Libraries
Library NameType
Mature peel (flavedo) cDNA subtraction librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig381 contig Csv1_Contig381:1..638. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB417349 vs. ExPASy Swiss-Prot
Match: GSTX1_SOLTU (Probable glutathione S-transferase OS=Solanum tuberosum GN=PRP1 PE=2 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 6.987e-51
Identity = 102/200 (51.00%), Postives = 131/200 (65.50%), Query Frame = 2
Query:   38 MAEVKLHGALLSPFVYRVIWALKLKGVPYEFVAEDLSNKSALLLKHNPVHKKIPVLVHGGKPVCESMVILEYIEETWPQNPLMPNNPYDRALARFWIKFAEDKGVAVWKLFRSTRQELQNTMKEALEMLQTVEEHGLGEKKFFNGDNIGLVGLAFGSIVYWLQVIEDIVGAKLFESHKFPHLHAWIETFKQVTLIEENLP 637
            MAEVKL G   SPF +RV WALK+KGV YEF+ EDL NKS LLL+ NP+HKKIPVL+H GK +CESMVILEYI+E +    ++P +PYDRALARFW K+ EDKG AVWK F S  +E +   +EA EML+ ++     +KK F GD  G   +       +L ++E++ G  L  S KFP+  AW + +   T  EE  P
Sbjct:    1 MAEVKLLGLRYSPFSHRVEWALKIKGVKYEFIEEDLQNKSPLLLQSNPIHKKIPVLIHNGKCICESMVILEYIDEAFEGPSILPKDPYDRALARFWAKYVEDKGAAVWKSFFSKGEEQEKAKEEAYEMLKILDNE-FKDKKCFVGDKFGFADIVANGAALYLGILEEVSGIVLATSEKFPNFCAWRDEY--CTQNEEYFP 197          
BLAST of CB417349 vs. ExPASy Swiss-Prot
Match: GSTX3_TOBAC (Probable glutathione S-transferase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 4.529e-50
Identity = 100/200 (50.00%), Postives = 131/200 (65.50%), Query Frame = 2
Query:   38 MAEVKLHGALLSPFVYRVIWALKLKGVPYEFVAEDLSNKSALLLKHNPVHKKIPVLVHGGKPVCESMVILEYIEETWPQNPLMPNNPYDRALARFWIKFAEDKGVAVWKLFRSTRQELQNTMKEALEMLQTVEEHGLGEKKFFNGDNIGLVGLAFGSIVYWLQVIEDIVGAKLFESHKFPHLHAWIETFKQVTLIEENLP 637
            MAEVKL G   SPF +RV WALKLKGV YE++ ED  NKS+LLL+ NPVHKK+PVL+H GKP+ ESMVILEYI+ET+    ++P +PYDRALARFW KF  DK  AV   F    +E +   +E  EML+ ++   L +KKFF GD  G   +A   + +WL V E+  G  L  S KFP+   W + +   + ++E+LP
Sbjct:    1 MAEVKLLGFWYSPFTHRVEWALKLKGVKYEYIEEDRDNKSSLLLQSNPVHKKVPVLIHNGKPIVESMVILEYIDETFEGPSILPKDPYDRALARFWSKFLGDKVAAVVNTFFRKGEEQEKGKEEVYEMLKVLDNE-LKDKKFFVGDKFGFADIAANLVGFWLGVFEEGYGVVLVTSEKFPNFSRWRDEYINCSQVKESLP 199          
BLAST of CB417349 vs. ExPASy Swiss-Prot
Match: GSTX6_SOYBN (Probable glutathione S-transferase OS=Glycine max GN=HSP26-A PE=2 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 5.915e-50
Identity = 99/200 (49.50%), Postives = 134/200 (67.00%), Query Frame = 2
Query:   44 EVKLHGALLSPFVYRVIWALKLKGVPYEFVAEDLSNKSALLLKHNPVHKKIPVLVHGGKPVCESMVILEYIEETWPQNPLMPNNPYDRALARFWIKFAEDK--GVAVWKLFRSTRQELQNTMKEALEMLQTVEEHGLGEKKFFNGDNIGLVGLAFGSIVYWLQVIEDIVGAKLFESHKFPHLHAWIETFKQVTLIEENLP 637
            +VKL G + SPFV RV  ALKLKGV Y+F+ E+L NKS LLLK+NPVHKK+PV VH  +P+ ES+VI+EYI+ETW  NP++P++PY RALARFW KF +DK  G     +F    +E +  ++E  E LQ +E   L +KKFF G+  GLV +A   I +W+ + ++I G +LF S KFP L+ W + F     + E LP
Sbjct:    7 DVKLLGIVGSPFVCRVQIALKLKGVEYKFLEENLGNKSDLLLKYNPVHKKVPVFVHNEQPIAESLVIVEYIDETWKNNPILPSDPYQRALARFWSKFIDDKIVGAVSKSVFTVDEKEREKNVEETYEALQFLENE-LKDKKFFGGEEFGLVDIAAVFIAFWIPIFQEIAGLQLFTSEKFPILYKWSQEFLNHPFVHEVLP 205          
BLAST of CB417349 vs. ExPASy Swiss-Prot
Match: GSTX2_TOBAC (Probable glutathione S-transferase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 2.248e-49
Identity = 97/200 (48.50%), Postives = 132/200 (66.00%), Query Frame = 2
Query:   38 MAEVKLHGALLSPFVYRVIWALKLKGVPYEFVAEDLSNKSALLLKHNPVHKKIPVLVHGGKPVCESMVILEYIEETWPQNPLMPNNPYDRALARFWIKFAEDKGVAVWKLFRSTRQELQNTMKEALEMLQTVEEHGLGEKKFFNGDNIGLVGLAFGSIVYWLQVIEDIVGAKLFESHKFPHLHAWIETFKQVTLIEENLP 637
            MAEVKL G   SPF +RV WALK+KGV YE++ ED  NKS+LLL+ NPV+KK+PVL+H GKP+ ESM+ILEYI+ET+    ++P +PYDRALARFW KF +DK  AV   F    +E +   +E  EML+ ++   L +KKFF GD  G   +A   + +WL V E+  G  L +S KFP+   W + +   + + E+LP
Sbjct:    1 MAEVKLLGFWYSPFSHRVEWALKIKGVKYEYIEEDRDNKSSLLLQSNPVYKKVPVLIHNGKPIVESMIILEYIDETFEGPSILPKDPYDRALARFWAKFLDDKVAAVVNTFFRKGEEQEKGKEEVYEMLKVLDNE-LKDKKFFAGDKFGFADIAANLVGFWLGVFEEGYGDVLVKSEKFPNFSKWRDEYINCSQVNESLP 199          
BLAST of CB417349 vs. ExPASy Swiss-Prot
Match: GSTX1_TOBAC (Probable glutathione S-transferase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 3.834e-49
Identity = 99/200 (49.50%), Postives = 130/200 (65.00%), Query Frame = 2
Query:   38 MAEVKLHGALLSPFVYRVIWALKLKGVPYEFVAEDLSNKSALLLKHNPVHKKIPVLVHGGKPVCESMVILEYIEETWPQNPLMPNNPYDRALARFWIKFAEDKGVAVWKLFRSTRQELQNTMKEALEMLQTVEEHGLGEKKFFNGDNIGLVGLAFGSIVYWLQVIEDIVGAKLFESHKFPHLHAWIETFKQVTLIEENLP 637
            MAEVKL G   SPF  RV WALK+KGV YE++ ED  NKS+LLL+ NP+HKK+PVL+H GK + ESMVILEYI+ET+    ++P +PYDRALARFW KF +DK  AV K F    +E +   +E  EML+ ++   L +KKFF GD  G   +A   + +WL V E+  G  L  S KFP+   W   +   + I+E+LP
Sbjct:    1 MAEVKLLGFWYSPFSRRVEWALKIKGVKYEYIEEDRDNKSSLLLQSNPIHKKVPVLIHNGKRIVESMVILEYIDETFEGPSILPKDPYDRALARFWAKFLDDKVPAVVKTFLRKGEEQEKDKEEVCEMLKVLDNE-LKDKKFFVGDKFGFADIAANLVAFWLGVFEEASGVVLVTSEKFPNFCKWRGEYINCSQIKESLP 199          
BLAST of CB417349 vs. ExPASy Swiss-Prot
Match: GSTXA_ARATH (Glutathione S-transferase 103-1A OS=Arabidopsis thaliana GN=103-1A PE=2 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 3.597e-39
Identity = 82/201 (40.80%), Postives = 127/201 (63.18%), Query Frame = 2
Query:   44 EVKLHGALLSPFVYRVIWALKLKGVPYEFVAEDLSNKSALLLKHNPVHKKIPVLVHGGKPVCESMVILEYIEETWPQNPLMPNNPYDRALARFWIKFAEDK--GVAVWKLFRSTRQELQNTMKEALEMLQTVEEHGLGEKKFFNGDNIGLVGLAFGSIV-YWLQVIEDIVGAKLFESHKFPHLHAWIETFKQVTLIEENLP 637
            EVKL G   SPF  RV  ALKLKG+PYE+V E L NKS LLL  NP+HKK+PVLVH GK + ES VILEYI+ETWPQNP++P +PY+R+ ARF+ K  +++   V    + R+  +  +   ++  E++  +E+  +G K +F G  +G +    GS++ + L+   + +G ++    KFP    W+   ++V ++++ +P
Sbjct:    6 EVKLLGIWASPFSRRVEMALKLKGIPYEYVEEILENKSPLLLALNPIHKKVPVLVHNGKTILESHVILEYIDETWPQNPILPQDPYERSKARFFAKLVDEQIMNVGFISMARADEKGREVLAEQVRELIMYLEKELVG-KDYFGGKTVGFLDFVAGSLIPFCLERGWEGIGLEVITEEKFPEFKRWVRNLEKVEIVKDCVP 205          
BLAST of CB417349 vs. ExPASy Swiss-Prot
Match: GSTU6_ORYSJ (Probable glutathione S-transferase GSTU6 OS=Oryza sativa subsp. japonica GN=GSTU6 PE=2 SV=2)

HSP 1 Score: 156.377 bits (394), Expect = 1.157e-37
Identity = 85/200 (42.50%), Postives = 121/200 (60.50%), Query Frame = 2
Query:   44 EVKLHGALLSPFVYRVIWALKLKGVPYEFVAEDLSNKSALLLKHNPVHKKIPVLVHGGKPVCESMVILEYIEETWP-----QNPLMPNNPYDRALARFWIKFAEDKGVAVWK--LFRS-TRQELQNTMKEALEMLQTVEEHGLGE----KKFFNGDNIGLVGLAFGSIVYWLQVIEDIVGAKLFESHKFPHLHAWIETFK 607
            E+KL G   SP+  RV   L LK +PYE+V E+L +KS LLL  NPVHK +PVL+H G+PV ES VI++YI+E WP     +  +MP++PY+RA+ARFW  + +DK    W   LF S T +E    + +A+  L+T+ E   GE    K FF GD +G V +  G  + W   I+ ++G +L +  + P L AW E F+
Sbjct:    6 ELKLLGVWSSPYAIRVRVVLNLKSLPYEYVEENLGDKSDLLLASNPVHKSVPVLLHAGRPVNESQVIVQYIDEVWPGGAGGRPSVMPSDPYERAVARFWAAYVDDKVRPAWLAILFGSKTEEERAAAVAQAVAALETL-EGAFGECSKGKPFFGGDGVGFVDVVLGGYLGWFTAIDKLIGRRLIDPARTPALAAWEERFR 204          
BLAST of CB417349 vs. ExPASy Swiss-Prot
Match: GSTX3_SOYBN (Glutathione S-transferase 3 OS=Glycine max GN=GST3 PE=1 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 3.261e-32
Identity = 77/200 (38.50%), Postives = 114/200 (57.00%), Query Frame = 2
Query:   44 EVKLHGALLSPFVYRVIWALKLKGVPYEFVAEDLSNKSALLLKHNPVHKKIPVLVHGGKPVCESMVILEYIEETW-PQNPLMPNNPYDRALARFWIKFAEDKGVAVW-KLFRSTRQELQNTMKEALEMLQTVEEHGLGEKKFFNGDNIGLVGLAFGSIVYWLQVIEDIVGAKLFESHKFPHLHAWIETFKQVTLIEENLP 637
            EV L     S +  R   AL  KGV YE+  E+L N+S LLL+ NP+HKKIPVL+H GKP+CES +I++YI+E W  ++PLMP++PY R+ ARFW+ + + K    W K++ S  +E +   KE + + + +EE  L +K F+  D  G V L   +   W    E     K+ E  + P L AW++   +   +   LP
Sbjct:    4 EVVLLDTWASMYGMRARIALAEKGVRYEYKEENLMNRSPLLLQMNPIHKKIPVLIHNGKPICESAIIVQYIDEVWNDKSPLMPSDPYKRSQARFWVDYIDKKIYDTWKKMWLSKGEEHEEGKKELISIFKQLEE-TLTDKPFYGDDTFGFVDLCLITFSSWFYTYETYGNFKMEE--ECPKLMAWVKRCMERETVSNTLP 200          
BLAST of CB417349 vs. ExPASy Swiss-Prot
Match: GSTXA_TOBAC (Probable glutathione S-transferase parA OS=Nicotiana tabacum GN=PARA PE=2 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 7.264e-32
Identity = 77/194 (39.69%), Postives = 111/194 (57.22%), Query Frame = 2
Query:   71 SPFVYRVIWALKLKGVPYEFVAEDLSNKSALLLKHNPVHKKIPVLVHGGKPVCESMVILEYIEETWPQN-PLMPNNPYDRALARFWIKFAEDK----GVAVWKLFRSTRQELQNTMKEALEMLQTVEEHGLGEKKFFNGDNIGLVGLAFGSIVYWLQVIEDIVGAKLFESHKFPHLHAWIETFKQVTLIEENLP 637
            S F  R+  AL LKG+ YE   E+LS+KS LLL+ NPVHKKIP+L+H  K +CES+ ILEYI+E W    PL+P++PY+R+ ARFW  + + K    G  VW       ++ +   KE +E+L+T+E   LG K +F GDN+G V +A      W    E      +    + P L  W +T  +   + ++LP
Sbjct:   14 SSFGMRLRIALALKGIKYEAKEENLSDKSPLLLEMNPVHKKIPILIHNSKAICESLNILEYIDEVWHDKCPLLPSDPYERSQARFWADYIDKKIYSTGRRVWS---GKGEDQEEAKKEFIEILKTLEGE-LGNKTYFGGDNLGFVDVALVPFTSWFYSYETCANFSI--EAECPKLVVWAKTCMESESVSKSLP 201          
BLAST of CB417349 vs. ExPASy Swiss-Prot
Match: GSTX1_NICPL (Probable glutathione S-transferase MSR-1 OS=Nicotiana plumbaginifolia GN=MSR-1 PE=2 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.239e-31
Identity = 72/160 (45.00%), Postives = 100/160 (62.50%), Query Frame = 2
Query:   71 SPFVYRVIWALKLKGVPYEFVAEDLSNKSALLLKHNPVHKKIPVLVHGGKPVCESMVILEYIEETWPQN-PLMPNNPYDRALARFWIKFAEDK----GVAVWKLFRSTRQELQNTMKEALEMLQTVEEHGLGEKKFFNGDNIGLVGLAFGSIVYWLQVIE 535
            S F  R+  AL LKG+ YE   E+LS+KS LLL+ NPVHKKIP+L+H GKP+CES+ ILEYI+E W +  PL+P++PY R+ ARFW  + ++K    G  VW       ++ +   KE +E+ +T+E   LG K +F GDN+G V +A      W    E
Sbjct:   14 SSFGMRLRIALALKGIKYEAKEENLSDKSPLLLEMNPVHKKIPILIHNGKPICESLNILEYIDEVWHEKCPLLPSDPYQRSQARFWANYIDNKIYSTGRRVWS---GKGEDQEEAKKEFIEIFKTLEGE-LGNKTYFGGDNLGFVDVALVPFTSWFYSYE 169          
The following BLAST results are available for this feature:
BLAST of CB417349 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 18
Match NameE-valueIdentityDescription
GSTX1_SOLTU6.987e-5151.00Probable glutathione S-transferase OS=Solanum tube... [more]
GSTX3_TOBAC4.529e-5050.00Probable glutathione S-transferase OS=Nicotiana ta... [more]
GSTX6_SOYBN5.915e-5049.50Probable glutathione S-transferase OS=Glycine max ... [more]
GSTX2_TOBAC2.248e-4948.50Probable glutathione S-transferase OS=Nicotiana ta... [more]
GSTX1_TOBAC3.834e-4949.50Probable glutathione S-transferase OS=Nicotiana ta... [more]
GSTXA_ARATH3.597e-3940.80Glutathione S-transferase 103-1A OS=Arabidopsis th... [more]
GSTU6_ORYSJ1.157e-3742.50Probable glutathione S-transferase GSTU6 OS=Oryza ... [more]
GSTX3_SOYBN3.261e-3238.50Glutathione S-transferase 3 OS=Glycine max GN=GST3... [more]
GSTXA_TOBAC7.264e-3239.69Probable glutathione S-transferase parA OS=Nicotia... [more]
GSTX1_NICPL1.239e-3145.00Probable glutathione S-transferase MSR-1 OS=Nicoti... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionEST0429 Mature peel (flavedo) cDNA subtraction library Citrus sinensis cDNA clone 6P102 similar to glutathione S-transferase (acc# BAC21263), mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB417349 ID=CB417349; Name=CB417349; organism=Citrus sinensis; type=EST; length=638bp
AAAAAACCTGATATTCAAATTCAATCTAAGAATTATCATGGCTGAAGTGA
AGCTTCATGGGGCACTGCTGAGTCCATTTGTTTACAGGGTGATTTGGGCT
CTGAAATTGAAAGGCGTGCCGTATGAATTTGTTGCAGAAGATCTCTCAAA
CAAAAGTGCTTTGCTTTTGAAGCACAATCCGGTTCACAAGAAGATCCCAG
TGCTTGTCCATGGCGGAAAACCAGTTTGTGAGTCCATGGTTATTCTCGAA
TACATCGAAGAGACGTGGCCACAGAATCCCTTGATGCCAAATAATCCTTA
TGATAGAGCTCTTGCTCGATTCTGGATTAAATTCGCCGAAGACAAGGGTG
TTGCTGTTTGGAAACTGTTTCGTAGCACTAGACAAGAACTACAAAACACA
ATGAAGGAAGCCTTGGAAATGCTACAAACCGTTGAAGAGCATGGCTTGGG
AGAGAAGAAATTTTTCAATGGAGACAATATTGGCTTAGTGGGCCTAGCGT
TTGGTTCAATTGTTTATTGGTTGCAAGTCATTGAAGATATAGTGGGAGCT
AAACTATTTGAATCACACAAATTCCCTCACTTGCATGCCTGGATTGAAAC
TTTCAAGCAAGTCACTTTGATTGAAGAAAATCTTCCTA
back to top