CB417379
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB417379 vs. ExPASy Swiss-Prot
Match: SMC22_ARATH (Structural maintenance of chromosomes protein 2-2 OS=Arabidopsis thaliana GN=SMC2-2 PE=2 SV=1) HSP 1 Score: 199.519 bits (506), Expect = 1.192e-50 Identity = 97/155 (62.58%), Postives = 120/155 (77.42%), Query Frame = 3 Query: 174 GHENERERLVMEHEAIVKEHASLENQLASVRMQINGLTSEVEEQKNKVAFTRTNHDQAQSELNAIRLKMKECDSQISGILKEQQKLQDKLGEAKLERKRLENEVKRMEMEQKDCSTKVDKLIEKHAWIASEKQLFGRSGTDYDFESRDPYKAREE 638 GHEN RERLVME EA+ +E + L++QL S+R QI+ L S+V Q+ KV + +HDQ+ SEL I KMKECD+QISG + EQ+K K+ + KL+RK+LENEV RMEME K+CS KVDKL+EKH WI SEK+LFG GTDYDFESRDP+KAREE Sbjct: 809 GHENVRERLVMEQEAVTQEQSYLKSQLTSLRTQISTLASDVGNQRAKVDAIQKDHDQSLSELKLIHAKMKECDTQISGSIAEQEKCLQKISDMKLDRKKLENEVTRMEMEHKNCSVKVDKLVEKHTWITSEKRLFGNGGTDYDFESRDPHKAREE 963
BLAST of CB417379 vs. ExPASy Swiss-Prot
Match: SMC21_ARATH (Structural maintenance of chromosomes protein 2-1 OS=Arabidopsis thaliana GN=SMC2-1 PE=2 SV=2) HSP 1 Score: 196.438 bits (498), Expect = 1.009e-49 Identity = 96/154 (62.34%), Postives = 120/154 (77.92%), Query Frame = 3 Query: 177 HENERERLVMEHEAIVKEHASLENQLASVRMQINGLTSEVEEQKNKVAFTRTNHDQAQSELNAIRLKMKECDSQISGILKEQQKLQDKLGEAKLERKRLENEVKRMEMEQKDCSTKVDKLIEKHAWIASEKQLFGRSGTDYDFESRDPYKAREE 638 HENE+E+LVME EA+ +E +SLE+ L S+ QI+ LTSEV+EQ+ KV + HD++ +EL I KMKECD+QISG + +Q+K KL + KLERK+LENEV RME + KDCS KVDKL+EKH WIASEKQLFG+ GTDYDFES DPY ARE+ Sbjct: 813 HENEKEKLVMEEEAMKQEQSSLESHLTSLETQISTLTSEVDEQRAKVDALQKIHDESLAELKLIHAKMKECDTQISGFVTDQEKCLQKLSDMKLERKKLENEVVRMETDHKDCSVKVDKLVEKHTWIASEKQLFGKGGTDYDFESCDPYVAREK 966
BLAST of CB417379 vs. ExPASy Swiss-Prot
Match: SMC2_CHICK (Structural maintenance of chromosomes protein 2 OS=Gallus gallus GN=SMC2 PE=2 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.268e-17 Identity = 47/147 (31.97%), Postives = 86/147 (58.50%), Query Frame = 3 Query: 180 ENERERLVMEHEAIVKEHASLENQLASVRMQINGLTSEVEEQKNKVAFTRTNHDQAQSELNAIRLKMKECDSQISGILKEQQKLQDKLGEAKLERKRLENEVKRMEMEQKDCSTKVDKLIEKHAWIASEKQLFGRSGTDYDFESRDP 620 + E E LV+E E + +E AS + Q + + I L +V + + TR + A++EL++ + M+E I + +K +++ E +L LE+++ + + E D S+ +DKL++++ WIASEK+LFG++ T YDFE+ +P Sbjct: 816 QQEVEALVLELEQLKQEQASYKQQSEAAQQAIASLKEQVSALEAEAVKTRESLKNAENELSSEKGLMEERTKDIKAKSAKIEKYREQNNELQLSINALEHDINKYQQETADASSTLDKLLKEYKWIASEKELFGQADTTYDFEANNP 962
BLAST of CB417379 vs. ExPASy Swiss-Prot
Match: SMC2_DICDI (Structural maintenance of chromosomes protein 2 OS=Dictyostelium discoideum GN=smc2 PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 8.068e-15 Identity = 40/149 (26.85%), Postives = 82/149 (55.03%), Query Frame = 3 Query: 192 ERLVMEHEAIVKEHASLENQLASVRMQINGLTSEVEEQKNKVAFTRTNHDQAQSELNAIRLKMKECDSQISGILKEQQKLQDKLGEAKLERKRLENEVKRMEMEQKDCSTKVDKLIEKHAWIASEKQLFGRSGTDYDFESRDPYKAREE 638 E+L +E + + E +L + + I+ + +V+ ++ T + L+ IR M + + I + +E +K+Q ++ E + ++L++ + R++ ++++ S ++ I+KH WI +EKQLF R G+D+DF + DP KA E Sbjct: 820 EKLDLEIQEMDNELENLSKETQGNQGTISKMRKDVDTLARSISETNKQIQDIRETLSEIRKDMAQKNDAIRSLHQELEKIQSEITEIDMSTEKLKSRMNRVDKDRQEASKWLEAAIKKHTWIKNEKQLFNRPGSDFDFNATDPSKANSE 968
BLAST of CB417379 vs. ExPASy Swiss-Prot
Match: SMC2_MOUSE (Structural maintenance of chromosomes protein 2 OS=Mus musculus GN=Smc2 PE=1 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.054e-14 Identity = 45/150 (30.00%), Postives = 82/150 (54.67%), Query Frame = 3 Query: 180 ENERERLVMEHEAIVKEHASLENQLASVRMQINGLTSEVEEQKNKVAFTRTNHDQAQSELNAIRLKMKECDSQISGILKEQQKLQDKLGEAKLERKRLENEVKRMEMEQKDCSTKVDKLIEKHAWIASEKQLFGRSGTDYDFESRDPYKA 629 + E E + +E E + +EHAS E QL +V I ++E+ +VA + + ++AQ EL + + D+ I E K + E++L+ K L++ + + + E D + KV K++ + WI +EK LFG+ + YDF++ +P +A Sbjct: 816 QQEVEAITLELEELKREHASNEQQLDAVNEAIKAYEGQIEKMAAEVAKNKESVNKAQDELMKQKQIITAQDNIIKDKCAEVAKHNLQNNESQLKIKELDHSISKHKREADDAAAKVSKMLSDYDWINAEKHLFGQPNSAYDFKTNNPKEA 965
BLAST of CB417379 vs. ExPASy Swiss-Prot
Match: SMC2_HUMAN (Structural maintenance of chromosomes protein 2 OS=Homo sapiens GN=SMC2 PE=1 SV=2) HSP 1 Score: 79.337 bits (194), Expect = 1.797e-14 Identity = 41/150 (27.33%), Postives = 85/150 (56.67%), Query Frame = 3 Query: 180 ENERERLVMEHEAIVKEHASLENQLASVRMQINGLTSEVEEQKNKVAFTRTNHDQAQSELNAIRLKMKECDSQISGILKEQQKLQDKLGEAKLERKRLENEVKRMEMEQKDCSTKVDKLIEKHAWIASEKQLFGRSGTDYDFESRDPYKA 629 + E E + +E E + +EH S + QL +V I S++E +VA + + ++AQ E+ + + D+ I E K +++ +++L+ K L++ + + + E +D + KV K+++ + WI +E+ LFG+ + YDF++ +P +A Sbjct: 816 QQEVEAITLELEELKREHTSYKQQLEAVNEAIKSYESQIEVMAAEVAKNKESVNKAQEEVTKQKEVITAQDTVIKAKYAEVAKHKEQNNDSQLKIKELDHNISKHKREAEDGAAKVSKMLKDYDWINAERHLFGQPNSAYDFKTNNPKEA 965
BLAST of CB417379 vs. ExPASy Swiss-Prot
Match: SMC2_XENLA (Structural maintenance of chromosomes protein 2 OS=Xenopus laevis GN=smc2 PE=1 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 8.920e-14 Identity = 41/150 (27.33%), Postives = 81/150 (54.00%), Query Frame = 3 Query: 180 ENERERLVMEHEAIVKEHASLENQLASVRMQINGLTSEVEEQKNKVAFTRTNHDQAQSELNAIRLKMKECDSQISGILKEQQKLQDKLGEAKLERKRLENEVKRMEMEQKDCSTKVDKLIEKHAWIASEKQLFGRSGTDYDFESRDPYKA 629 + E + LV+E E + +E + + Q+ +V + + + ++V+ + +AQ EL + + D +I E KL++ + +L+ K LE+ + + + + D + KV K++ + WIASEK LFG++ T YDF++ +P +A Sbjct: 817 QQEVDALVLELEELKREQTTYKQQIETVDEAMKAYQEQADSMASEVSKNKEAVKKAQDELAKQKEIIMGHDKEIKTKSSEAGKLRENNNDLQLKIKELEHNISKHKKDSADAAAKVAKMLNDYEWIASEKHLFGQANTAYDFKTNNPKEA 966
BLAST of CB417379 vs. ExPASy Swiss-Prot
Match: SMC2_PLAF7 (Structural maintenance of chromosomes protein 2 OS=Plasmodium falciparum (isolate 3D7) GN=MAL13P1.96 PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 7.068e-11 Identity = 35/144 (24.31%), Postives = 76/144 (52.78%), Query Frame = 3 Query: 180 ENERERLVMEHEAIVKEHASLENQLASVRMQINGLTSEVEEQKNKVAFTRTNHDQAQSELNAIRLKMKECDSQISGILKEQQKLQDKLGEAKLERKRLENEVKRMEMEQKDCSTKVDKLIEKHAWIASEKQLFGRSGTDYDFES 611 + E + ++++ E K+ N L+S IN + ++E+ + + T+ N + ++++ ++ ++++ ++K+ + L+ K E L+ K+LEN + ++ + K S V L + H WI S + LF + T YDFE+ Sbjct: 833 KEEIDDVLLQIENYKKQKEKETNDLSSTDEIINEIEKKIEDIEKNINITKENLKELENKITELQSSFSSYENEMKHVVKKIEDLEKKKSENILDLKKLENTLLDLQKDLKTSSDTVKYLYKTHVWIESYEPLFNKKYTPYDFEN 976 The following BLAST results are available for this feature:
BLAST of CB417379 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CB417379 ID=CB417379; Name=CB417379; organism=Citrus sinensis; type=EST; length=638bpback to top |