CB417385
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB417385 vs. ExPASy Swiss-Prot
Match: GCN1L_HUMAN (Translational activator GCN1 OS=Homo sapiens GN=GCN1L1 PE=1 SV=5) HSP 1 Score: 99.3673 bits (246), Expect = 1.173e-20 Identity = 55/177 (31.07%), Postives = 97/177 (54.80%), Query Frame = 2 Query: 2 PTLLHALEDDQTSDTALDGLKQILSVRTTAVLPHILPKLVHLPLSAFNAHALGALAEVAGPGLNFHLGTILPALLSAMGD--DDMDVQSLAKEAAETVTLVIDEEGIESLVSELLKGVGDNQASIRRSSAYLIGYFYKNSKLYLVDEAPNMISTLIVLLSDSDSTTVAAAWEALSRV 526 P LL L+D++ S+ ALDGLKQ++++++ VLP+++PKL P+ N L L+ VAG L HLG ILPA++ A+ + D Q + V D+ G ++ +LL+ + +R+++A ++ + SK +++S LI L +DS + +W+AL+ + Sbjct: 2046 PFLLKQLDDEEVSEFALDGLKQVMAIKSRVVLPYLVPKLTTPPV---NTRVLAFLSSVAGDALTRHLGVILPAVMLALKEKLGTPDEQLEMANCQAVILSVEDDTGHRIIIEDLLEATRSPEVGMRQAAAIILNIYCSRSKADYTSHLRSLVSGLIRLFNDSSPVVLEESWDALNAI 2219
BLAST of CB417385 vs. ExPASy Swiss-Prot
Match: GCN1L_DICDI (Translational activator gcn1 OS=Dictyostelium discoideum GN=gcn1l1 PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 3.412e-20 Identity = 63/182 (34.62%), Postives = 100/182 (54.95%), Query Frame = 2 Query: 2 PTLLHALEDDQTSDTA---LDGLKQILSVRTTAVLPHILPKLVHLPLSAFNAHALGALAEVAGPGLNFHLGTILPALL-SAMGDDDMDVQSLAKEAAETVTLVIDEEGIESLVSELLKGVGDNQASIRRSSAYLIGYFYKNSKLYLVDEAPNMISTLIVLLSDSDSTTVAAAWEALSRVVAS 535 P L+ L++ D A LDGL+Q++ VR++ VLP ++PKL+ P+S N AL +LA AG GL HL TI+P+L+ S + + KEAA ++ IDE+G ++L+ L++ +IR + LIG FY N + + ++ +L+ L +D D+ AA AL + S Sbjct: 2047 PQLIQLLDNSNNKDLAGYALDGLRQVILVRSSIVLPVLIPKLLSRPISTSNVTALSSLAADAGEGLYVHLSTIIPSLIESFTNPNTISNAKEIKEAAVSICKSIDEQGWDTLIGLLIEQTEIRLPNIRLGACELIGEFY-NGNTMVTEYPEELLLSLLSLFNDPDALVQQAANNALGFITKS 2227
BLAST of CB417385 vs. ExPASy Swiss-Prot
Match: GCN1_YEAST (Translational activator GCN1 OS=Saccharomyces cerevisiae GN=GCN1 PE=1 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 3.531e-17 Identity = 59/179 (32.96%), Postives = 94/179 (52.51%), Query Frame = 2 Query: 2 PTLLHALEDDQTSDTALDGLKQILSVRTTAVLPHILPKLVHLPLSAFNAHALGALAEVAGPGLNFHLGTILPALLSAM--GDDDMDVQSLAKEAAETVTL-VIDEEGIESLVSELLKGVGDNQASIRRSSAYLIGYFYKNSKLYLVDEAPNMISTLIVLLSDSDSTTVAAAWEALSRVV 529 P LLH LE SD AL GL++I+S ++ + P ++P L+ P+ AF A ALG+LAEVAG L L I+ AL+ A+ +D + + A + V L V D+EG+ L+ +++ + + R + + F+ + L PN +S I+ L D D V + ALS ++ Sbjct: 1992 PYLLHMLESSDNSDFALLGLQEIMSKKSDVIFPILIPTLLAPPIDAFRASALGSLAEVAGSALYKRLSIIINALVDAIIGTSEDESTKGALELALDRVFLSVNDDEGLHPLLQQIMSLLKSDNIEKRIAVLERLPNFFDKTVLDFDVYIPNFVSHAILSLDDEDQRVVNGNFNALSTLL 2170
BLAST of CB417385 vs. ExPASy Swiss-Prot
Match: GCN1_SCHPO (Translational activator gcn1 OS=Schizosaccharomyces pombe GN=gcn1 PE=2 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 5.098e-16 Identity = 57/179 (31.84%), Postives = 93/179 (51.96%), Query Frame = 2 Query: 2 PTLLHALEDDQTSDTALDGLKQILSVRTTAVLPHILPKLVHLPLSAFNAHALGALAEVAGPGLNFHLGTILPALL-SAMGDDDMDVQSLAKEAAETVTLVIDEEGIESLVSELLKGVGDNQASIRRSSAYLIGYFYKNSKLYLVDEAPNMISTLIVLLSDSDSTTVAAAWEALSRVVAS 535 P LL LE + S+ AL L++I+S R++ + P ++P L+ P+SAFNA AL +LA+VAG LN L +IL AL+ S++ D+ +L + V D+EG++ L++ R +A + F++N KL + + I L D V AA A + +V++ Sbjct: 2027 PQLLKLLESENQSEQALSALREIISRRSSTIFPVLIPTLIKKPVSAFNARALSSLAQVAGVTLNKRLPSILNALMESSLASTGDDLVALNGAIDKVNLSVKDQEGLQILMAHFYSFSESEDFRKRLFAAEHMLVFFQNCKLDYYRYVGDWVRHFITLFEDKSQDVVVAAVAAQNTLVSA 2205 The following BLAST results are available for this feature:
BLAST of CB417385 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CB417385 ID=CB417385; Name=CB417385; organism=Citrus sinensis; type=EST; length=536bpback to top |