CB417396
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB417396 vs. ExPASy Swiss-Prot
Match: AP1B_DICDI (AP-1 complex subunit beta OS=Dictyostelium discoideum GN=ap1b1 PE=3 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 1.284e-34 Identity = 71/117 (60.68%), Postives = 86/117 (73.50%), Query Frame = 2 Query: 2 RKTAAICVAKLYDINAELVEDRGFLESLKDLISDNNPMXXXXXXXXXXEIQENSSRPIFEITSHTLSKLLTALNECTEWGQVFILDALSRYKAADAREAENIVERVTPRLQHANCAV 352 RKTAA+CVAKLYD+N ELVE++GFL L DL+ D+NPM EI E S + +F I S L+KLL ALNECTEWGQVFIL++L +Y D++EAEN+ ERV PRLQHAN AV Sbjct: 138 RKTAAVCVAKLYDVNPELVENQGFLNILNDLLGDSNPMVVANAVASLTEIDEVSKKEVFRIHSGNLNKLLAALNECTEWGQVFILNSLCKYTPRDSQEAENVCERVAPRLQHANSAV 254
BLAST of CB417396 vs. ExPASy Swiss-Prot
Match: AP1B1_HUMAN (AP-1 complex subunit beta-1 OS=Homo sapiens GN=AP1B1 PE=1 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 2.190e-34 Identity = 72/118 (61.02%), Postives = 90/118 (76.27%), Query Frame = 2 Query: 2 RKTAAICVAKLYDINAELVEDRGFLESLKDLISDNNPMXXXXXXXXXXEIQENS-SRPIFEITSHTLSKLLTALNECTEWGQVFILDALSRYKAADAREAENIVERVTPRLQHANCAV 352 RKTAA+CVAKL+DINA+LVED+GFL++LKDLISD+NPM EI E+ S + ++ +++KLLTALNECTEWGQ+FILD L+ Y D REA++I ERVTPRL HAN AV Sbjct: 138 RKTAAVCVAKLHDINAQLVEDQGFLDTLKDLISDSNPMVVANAVAALSEIAESHPSSNLLDLNPQSINKLLTALNECTEWGQIFILDCLANYMPKDDREAQSICERVTPRLSHANSAV 255
BLAST of CB417396 vs. ExPASy Swiss-Prot
Match: AP1B1_MOUSE (AP-1 complex subunit beta-1 OS=Mus musculus GN=Ap1b1 PE=1 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 2.860e-34 Identity = 72/118 (61.02%), Postives = 89/118 (75.42%), Query Frame = 2 Query: 2 RKTAAICVAKLYDINAELVEDRGFLESLKDLISDNNPMXXXXXXXXXXEIQENS-SRPIFEITSHTLSKLLTALNECTEWGQVFILDALSRYKAADAREAENIVERVTPRLQHANCAV 352 RKTAA+CVAKL+DINA+LVED+GFL++LKDLISD+NPM EI E+ S + ++ +++KLLTALNECTEWGQ+FILD L Y D REA++I ERVTPRL HAN AV Sbjct: 138 RKTAAVCVAKLHDINAQLVEDQGFLDTLKDLISDSNPMVVANAVAALSEIAESHPSSNLLDLNPQSINKLLTALNECTEWGQIFILDCLDNYMPKDDREAQSICERVTPRLSHANSAV 255
BLAST of CB417396 vs. ExPASy Swiss-Prot
Match: AP2B1_RAT (AP-2 complex subunit beta OS=Rattus norvegicus GN=Ap2b1 PE=1 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 6.371e-34 Identity = 70/118 (59.32%), Postives = 88/118 (74.58%), Query Frame = 2 Query: 2 RKTAAICVAKLYDINAELVEDRGFLESLKDLISDNNPMXXXXXXXXXXEIQENSSRP-IFEITSHTLSKLLTALNECTEWGQVFILDALSRYKAADAREAENIVERVTPRLQHANCAV 352 RKTAA+CVAKL+DINA++VED+GFL+SL+DLI+D+NPM EI E+ + ++ ++KLLTALNECTEWGQ+FILD LS Y D REA++I ERVTPRL HAN AV Sbjct: 138 RKTAAVCVAKLHDINAQMVEDQGFLDSLRDLIADSNPMVVANAVAALSEISESHPNSNLLDLNPQNINKLLTALNECTEWGQIFILDCLSNYNPKDDREAQSICERVTPRLSHANSAV 255
BLAST of CB417396 vs. ExPASy Swiss-Prot
Match: AP2B1_MOUSE (AP-2 complex subunit beta OS=Mus musculus GN=Ap2b1 PE=1 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 6.371e-34 Identity = 70/118 (59.32%), Postives = 88/118 (74.58%), Query Frame = 2 Query: 2 RKTAAICVAKLYDINAELVEDRGFLESLKDLISDNNPMXXXXXXXXXXEIQENSSRP-IFEITSHTLSKLLTALNECTEWGQVFILDALSRYKAADAREAENIVERVTPRLQHANCAV 352 RKTAA+CVAKL+DINA++VED+GFL+SL+DLI+D+NPM EI E+ + ++ ++KLLTALNECTEWGQ+FILD LS Y D REA++I ERVTPRL HAN AV Sbjct: 138 RKTAAVCVAKLHDINAQMVEDQGFLDSLRDLIADSNPMVVANAVAALSEISESHPNSNLLDLNPQNINKLLTALNECTEWGQIFILDCLSNYNPKDDREAQSICERVTPRLSHANSAV 255
BLAST of CB417396 vs. ExPASy Swiss-Prot
Match: AP2B1_HUMAN (AP-2 complex subunit beta OS=Homo sapiens GN=AP2B1 PE=1 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 6.371e-34 Identity = 70/118 (59.32%), Postives = 88/118 (74.58%), Query Frame = 2 Query: 2 RKTAAICVAKLYDINAELVEDRGFLESLKDLISDNNPMXXXXXXXXXXEIQENSSRP-IFEITSHTLSKLLTALNECTEWGQVFILDALSRYKAADAREAENIVERVTPRLQHANCAV 352 RKTAA+CVAKL+DINA++VED+GFL+SL+DLI+D+NPM EI E+ + ++ ++KLLTALNECTEWGQ+FILD LS Y D REA++I ERVTPRL HAN AV Sbjct: 138 RKTAAVCVAKLHDINAQMVEDQGFLDSLRDLIADSNPMVVANAVAALSEISESHPNSNLLDLNPQNINKLLTALNECTEWGQIFILDCLSNYNPKDDREAQSICERVTPRLSHANSAV 255
BLAST of CB417396 vs. ExPASy Swiss-Prot
Match: AP2B1_BOVIN (AP-2 complex subunit beta OS=Bos taurus GN=AP2B1 PE=1 SV=2) HSP 1 Score: 142.51 bits (358), Expect = 6.371e-34 Identity = 70/118 (59.32%), Postives = 88/118 (74.58%), Query Frame = 2 Query: 2 RKTAAICVAKLYDINAELVEDRGFLESLKDLISDNNPMXXXXXXXXXXEIQENSSRP-IFEITSHTLSKLLTALNECTEWGQVFILDALSRYKAADAREAENIVERVTPRLQHANCAV 352 RKTAA+CVAKL+DINA++VED+GFL+SL+DLI+D+NPM EI E+ + ++ ++KLLTALNECTEWGQ+FILD LS Y D REA++I ERVTPRL HAN AV Sbjct: 138 RKTAAVCVAKLHDINAQMVEDQGFLDSLRDLIADSNPMVVANAVAALSEISESHPNSNLLDLNPQNINKLLTALNECTEWGQIFILDCLSNYNPKDDREAQSICERVTPRLSHANSAV 255
BLAST of CB417396 vs. ExPASy Swiss-Prot
Match: AP1B1_BOVIN (AP-1 complex subunit beta-1 OS=Bos taurus GN=AP2B1 PE=2 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 6.371e-34 Identity = 70/118 (59.32%), Postives = 88/118 (74.58%), Query Frame = 2 Query: 2 RKTAAICVAKLYDINAELVEDRGFLESLKDLISDNNPMXXXXXXXXXXEIQENSSRP-IFEITSHTLSKLLTALNECTEWGQVFILDALSRYKAADAREAENIVERVTPRLQHANCAV 352 RKTAA+CVAKL+DINA++VED+GFL+SL+DLI+D+NPM EI E+ + ++ ++KLLTALNECTEWGQ+FILD LS Y D REA++I ERVTPRL HAN AV Sbjct: 138 RKTAAVCVAKLHDINAQMVEDQGFLDSLRDLIADSNPMVVANAVAALSEISESHPNSNLLDLNPQNINKLLTALNECTEWGQIFILDCLSNYNPKDDREAQSICERVTPRLSHANSAV 255
BLAST of CB417396 vs. ExPASy Swiss-Prot
Match: AP1B1_RAT (AP-1 complex subunit beta-1 OS=Rattus norvegicus GN=Ap1b1 PE=1 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 1.087e-33 Identity = 71/118 (60.17%), Postives = 89/118 (75.42%), Query Frame = 2 Query: 2 RKTAAICVAKLYDINAELVEDRGFLESLKDLISDNNPMXXXXXXXXXXEIQENS-SRPIFEITSHTLSKLLTALNECTEWGQVFILDALSRYKAADAREAENIVERVTPRLQHANCAV 352 RKTAA+CVAKL+DINA+LVED+GFL++LKDLISD+NPM EI E+ S + ++ + +++KLLTALNECTEW Q+FILD L Y D REA++I ERVTPRL HAN AV Sbjct: 138 RKTAAVCVAKLHDINAQLVEDQGFLDTLKDLISDSNPMVVANRVAALSEIAESHPSSNLLDLKAQSINKLLTALNECTEWAQIFILDCLGNYMPKDDREAQSICERVTPRLSHANSAV 255
BLAST of CB417396 vs. ExPASy Swiss-Prot
Match: AP1B1_SCHPO (AP-1 complex subunit beta-1 OS=Schizosaccharomyces pombe GN=apl2 PE=1 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 2.126e-21 Identity = 47/118 (39.83%), Postives = 72/118 (61.02%), Query Frame = 2 Query: 2 RKTAAICVAKLYDINAELVEDRGFLESLKDLISDNNPMXXXXXXXXXXEIQENS-SRPIFEITSHTLSKLLTALNECTEWGQVFILDALSRYKAADAREAENIVERVTPRLQHANCAV 352 RK AA+CV K+YD++ E GF+E L+ L+SD NP+ EI + + F + +L+ AL+EC EWG++ IL++L+R++ +D +EAE + ERV P+ QHAN V Sbjct: 142 RKAAAVCVVKMYDLDREYCASNGFIEQLQALVSDPNPVVVANAVRSLAEIHDQDPEKGYFNVVYTMTDRLMVALSECNEWGRITILNSLARFRTSDIKEAEYVCERVVPQFQHANSGV 259 The following BLAST results are available for this feature:
BLAST of CB417396 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 12
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Sequences
The
following sequences are available for this feature:
EST sequence >CB417396 ID=CB417396; Name=CB417396; organism=Citrus sinensis; type=EST; length=353bpback to top |