CB417421
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB417421 vs. ExPASy Swiss-Prot
Match: SYY_MIMIV (Tyrosyl-tRNA synthetase OS=Acanthamoeba polyphaga mimivirus GN=YARS PE=1 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 4.304e-21 Identity = 48/123 (39.02%), Postives = 76/123 (61.79%), Query Frame = 1 Query: 166 STPQMSVEEKFRIVRSIGEECIQEDELLNLLTKKPQPICYDGFEPSGRMHIAQGVMKALSVNKLTSAGCKVKIWVADWFAQLNNKLGGDLKKIQTVGRYLIEIWIAVGMRTERVEFLWSSEEI 534 +T + E + + SI EEC D L L+ Y+GFEPSGR+HIAQ ++ ++ N + G ++ I++ADWFA++N K+ GD+ KI+ +GRY IE++ A G+ + F+W+SE I Sbjct: 3 NTDHTNNEHRLTQLLSIAEECETLDRLKQLVDSGRIFTAYNGFEPSGRIHIAQALITVMNTNNIIECGGQMIIYIADWFAKMNLKMNGDINKIRELGRYFIEVFKACGINLDGTRFIWASEFI 125
BLAST of CB417421 vs. ExPASy Swiss-Prot
Match: SYY_PICTO (Tyrosyl-tRNA synthetase OS=Picrophilus torridus GN=tyrS PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.027e-14 Identity = 40/108 (37.04%), Postives = 62/108 (57.41%), Query Frame = 1 Query: 205 VRSIGEECIQEDELLNLLTKKPQPICYDGFEPSGRMHIAQGVMKALSVNKLTSAGCKVKIWVADWFAQLNNKLGGDLKKIQTVGRYLIEIWIAVGMRTERVEFLWSSE 528 V+ EE + DE L P+ Y GFEPSG H+ ++ A +N + +AG K+ + +ADW A +N+KL GDL +I+ G W+A G+ + V+F+W+SE Sbjct: 7 VKKNTEEIVTMDEAFKALNNNPKG--YIGFEPSGNPHLGTCLLLANKINDMVNAGIKMTVLLADWHAMVNDKLNGDLNEIRKSGELFKRAWLAAGLNS-NVKFVWASE 111
BLAST of CB417421 vs. ExPASy Swiss-Prot
Match: SYY_SULAC (Tyrosyl-tRNA synthetase OS=Sulfolobus acidocaldarius GN=tyrS PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 1.937e-13 Identity = 40/117 (34.19%), Postives = 68/117 (58.12%), Query Frame = 1 Query: 178 MSVEEKFRIVRSIGEECIQEDELLNLLTKKPQPICYDGFEPSGRMHIAQGVMKALSVNKLTSAGCKVKIWVADWFAQLNNKLGGDLKKIQTVGRYLIEIWIAVGMRTERVEFLWSSE 528 M+++EK +++ +E I DEL L + + Y GFEPSG HI ++ A + L AG + I VA W A +N+KLGGDL+KI+ G+Y +E+ G+ +++ +++ + Sbjct: 1 MNIDEKIKLITRNTDEVITIDELKKKLEENSKLKGYIGFEPSGLFHIGW-LIWAQKLKDLIKAGVDMSILVATWHAMINDKLGGDLEKIKLAGKYALEVLEGFGVDMSKLKVVYAED 116
BLAST of CB417421 vs. ExPASy Swiss-Prot
Match: SYY_METKA (Tyrosyl-tRNA synthetase OS=Methanopyrus kandleri GN=tyrS PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 2.797e-12 Identity = 41/117 (35.04%), Postives = 68/117 (58.12%), Query Frame = 1 Query: 178 MSVEEKFRIVRSIGEECIQEDELLNLLTKKPQPICYDGFEPSGRMHIAQGVMKALSVNKLTSAGCKVKIWVADWFAQLNNKLGGDLKKIQTVGRYLIEIWIAVGMRTERVEFLWSSE 528 M VEE+ ++V E + E+EL LL +K +P+ Y GFEPSG++H+ ++ ++ L AG V I +AD A LN K G L++++ + Y ++A+G+ + EF+ SE Sbjct: 1 MDVEERLKLVTRNAVEVVTEEELRQLLEEKEEPVAYVGFEPSGKVHLGHKLVIDKMID-LQEAGFHVIILLADLHAYLNEK--GTLEEVRELADYNRRCFLAMGLDPNKTEFVLGSE 114
BLAST of CB417421 vs. ExPASy Swiss-Prot
Match: SYY_SULTO (Tyrosyl-tRNA synthetase OS=Sulfolobus tokodaii GN=tyrS PE=3 SV=2) HSP 1 Score: 70.4774 bits (171), Expect = 6.230e-12 Identity = 43/118 (36.44%), Postives = 65/118 (55.08%), Query Frame = 1 Query: 178 MSVEEKFRIVRSIGEECIQEDELLNLLTKKPQPICYDGFEPSGRMHIAQGVMKALSVNKLTSAGCKV-KIWVADWFAQLNNKLGGDLKKIQTVGRYLIEIWIAVGMRTERVEFLWSSE 528 M+VEEK +I+ E + DEL L + + Y GFEPSG HI ++ A + L G + I VA W A +N+KLGG+L KI+ G+Y IE+ A G+ +V +++ + Sbjct: 1 MNVEEKIKIISKNTAEIVTIDELRKKLEENQKLKGYIGFEPSGLFHIGW-LIWAQKLKDLVDVGVDMMSILVATWHAWINDKLGGNLDKIKLAGQYAIEVLNAYGVDMSKVRIVYAED 117
BLAST of CB417421 vs. ExPASy Swiss-Prot
Match: SYY_ARCFU (Tyrosyl-tRNA synthetase OS=Archaeoglobus fulgidus GN=tyrS PE=1 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 6.230e-12 Identity = 40/117 (34.19%), Postives = 65/117 (55.56%), Query Frame = 1 Query: 178 MSVEEKFRIVRSIGEECIQEDELLNLLTKKPQPICYDGFEPSGRMHIAQGVMKALSVNKLTSAGCKVKIWVADWFAQLNNKLGGDLKKIQTVGRYLIEIWIAVGMRTERVEFLWSSE 528 M + EK R++ EE + E+EL L+ K +P Y G+EPSG +H+ +M + L AG ++ + +AD A LN K G ++I V Y +++IA+G+ R +F+ SE Sbjct: 1 MDITEKLRLITRNAEEVVTEEELRQLIETKEKPRAYVGYEPSGEIHLGH-MMTVQKLMDLQEAGFEIIVLLADIHAYLNEK--GTFEEIAEVADYNKKVFIALGLDESRAKFVLGSE 114
BLAST of CB417421 vs. ExPASy Swiss-Prot
Match: SYY_METTH (Tyrosyl-tRNA synthetase OS=Methanobacterium thermoautotrophicum GN=tyrS PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 8.137e-12 Identity = 38/101 (37.62%), Postives = 64/101 (63.37%), Query Frame = 1 Query: 223 ECIQEDELLNLLTKKPQPICYDGFEPSGRMHIAQGVMKALSVNKLTSAGCKVKIWVADWFAQLNNKLGGDLKKIQTVGRYLIEIWIAVGMRTERVEFLWSS 525 E I +EL+++L KK +P+ Y G+EPSGR+H+ + + +L AG +VKI +AD+ A LN K G +++I+ + Y + ++A+G+ ER EF+ S Sbjct: 14 EVITPEELMDVL-KKDEPVVYTGYEPSGRIHLGH-ALTVRKLRELQDAGFRVKILLADYHAYLNGK--GSMERIRELADYNQKCFLALGLSPERTEFILGS 110
BLAST of CB417421 vs. ExPASy Swiss-Prot
Match: SYY_PYRFU (Tyrosyl-tRNA synthetase OS=Pyrococcus furiosus GN=tyrS PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.388e-11 Identity = 40/123 (32.52%), Postives = 68/123 (55.28%), Query Frame = 1 Query: 178 MSVEEKFRIV-RSIGEECIQEDELLNLLTKKPQPICYDGFEPSGRMHIAQGVMKALSVNKLTSAGCKVKIWVADWFAQLNNKLGGDLKKIQTVGRYLIEIWI-----AVGMRTERVEFLWSSE 528 M +EE+ ++V + EE + + L +L Y GFE SG +H+ G+M + AG K ++++ADW + +N+KLGGDL+ IQ V ++ + +G + E+VEF+ +SE Sbjct: 1 MDIEERIKLVLKKPTEEVLTVENLRHLFEIGAPLQHYIGFEISGYIHLGTGLMAGAKIADFQKAGIKTRVFLADWHSWINDKLGGDLETIQEVALKYFKVGMEKSIEVMGGKPEKVEFVLASE 123
BLAST of CB417421 vs. ExPASy Swiss-Prot
Match: SYY_METS3 (Tyrosyl-tRNA synthetase OS=Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) GN=tyrS PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 1.813e-11 Identity = 43/120 (35.83%), Postives = 67/120 (55.83%), Query Frame = 1 Query: 178 MSVEEKFRIVRSIGEECIQEDELLNLLTKKPQPICYDGFEPSGRMHIAQGVMKALSVNKLTSAGCKVKIWVADWFAQLNNKLGGDLKKIQTVGRYLIEIWIAVGMRTERVEFLWSSEEIN 537 MS+EEK +++ E I +EL +L KK QPI Y G+EPSG++H+ V + L G K+KI +AD+ A LN K G +++I Y ++ + A+G+ L SS ++N Sbjct: 1 MSIEEKIQLIEKGTLEVIDTEELKEVL-KKEQPIAYTGYEPSGKIHLGHAV-TVQKLKTLQKLGFKIKILLADFHAFLNGK--GSIEEIAETAEYNMKCFKALGLDETTEFILGSSFQLN 116
BLAST of CB417421 vs. ExPASy Swiss-Prot
Match: SYY_METMA (Tyrosyl-tRNA synthetase OS=Methanosarcina mazei GN=tyrS PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 1.813e-11 Identity = 39/116 (33.62%), Postives = 68/116 (58.62%), Query Frame = 1 Query: 190 EKFRIVRSIGEECIQEDELLNLLTKKPQPICYDGFEPSGRMHIAQGVMKALSVNK---LTSAGCKVKIWVADWFAQLNNKLGGDLKKIQTVGRYLIEIWIAVGMRTERVEFLWSSE 528 ++ +++ +E + E+EL LL KK P Y G+EPSG++H+ L+VNK L AG K+ + +AD A LN K G L++++ + Y +IA+G+ E+ +F++ S+ Sbjct: 2 DRLELIKRNVQEIVTEEELEGLLNKKETPRAYVGYEPSGKIHMGH----VLTVNKLIDLQKAGFKITVLLADVHAYLNRK--GTLEEVRKIADYNRRCFIALGLDEEQTDFVYGSD 111 The following BLAST results are available for this feature:
BLAST of CB417421 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 15
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Sequences
The
following sequences are available for this feature:
EST sequence >CB417421 ID=CB417421; Name=CB417421; organism=Citrus sinensis; type=EST; length=552bpback to top |