CB417426
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB417426 vs. ExPASy Swiss-Prot
Match: 4CLL9_ARATH (4-coumarate--CoA ligase-like 9 OS=Arabidopsis thaliana GN=4CLL9 PE=1 SV=2) HSP 1 Score: 113.235 bits (282), Expect = 4.139e-25 Identity = 65/120 (54.17%), Postives = 89/120 (74.17%), Query Frame = 2 Query: 5 SLSRSLKTRF-SLSKNDVAYILSLASLHVPILYFSLLSLGVVISPANPLSSTSEVSHQIQLSKPSIAFATSHTSHKLPSN---LRTILMDSPEFISLLNQNEDVADFANSNMTVYQSDPA 352 SL+ SL+ RF SL+ +VA+ILS +SL +P+LY +L+S+GVV+SPANP+ S SEVSHQ+++S+P IAFATS T KL S+ L T+LMDS EF+S LN++ D + + V QSDPA Sbjct: 89 SLAVSLRERFPSLASRNVAFILSPSSLDIPVLYLALMSIGVVVSPANPIGSESEVSHQVEVSEPVIAFATSQTVKKLQSSSLPLGTVLMDSTEFLSWLNRS-DSSSVNPFQVQVNQSDPA 207
BLAST of CB417426 vs. ExPASy Swiss-Prot
Match: 4CLL7_ORYSJ (4-coumarate--CoA ligase-like 7 OS=Oryza sativa subsp. japonica GN=4CLL7 PE=2 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 2.599e-19 Identity = 49/95 (51.58%), Postives = 69/95 (72.63%), Query Frame = 2 Query: 5 SLSRSLKTRFSLSKNDVAYILSLASLHVPILYFSLLSLGVVISPANPLSSTSEVSHQIQLSKPSIAFATSHTSHKLPSNLRT-ILMDSPEFISLL 286 +L+ +L++R L DVA++L+ A L VP+LYF+LLS+G V+SPANP + +EVS + LS S+AFA S T+ KLP+ L T +L+DSP F SLL Sbjct: 90 ALAGALRSRVGLRGGDVAFVLAPAGLDVPVLYFALLSIGAVVSPANPALTPAEVSRLVSLSGASVAFAVSSTATKLPAGLTTVVLLDSPHFRSLL 184
BLAST of CB417426 vs. ExPASy Swiss-Prot
Match: 4CLL5_ORYSJ (4-coumarate--CoA ligase-like 5 OS=Oryza sativa subsp. japonica GN=4CLL5 PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 2.973e-15 Identity = 44/116 (37.93%), Postives = 71/116 (61.21%), Query Frame = 2 Query: 5 SLSRSLKTRFSLSKNDVAYILSLASLHVPILYFSLLSLGVVISPANPLSSTSEVSHQIQLSKPSIAFATSHTSHKLPSNLRTILMDSPEFISLLNQNEDVADFANSNMTVYQSDPA 352 SL+ L L DVA +++ + L VP+L F+L+S+G V+SPANP+S+ E +HQ+ LS+P +AFA + KLP ++R +++ S E+ L ++ A + + V QSD A Sbjct: 85 SLAGGLWCSLGLRPGDVALVVAPSRLEVPVLDFALMSIGAVVSPANPVSTPEEYAHQVALSRPVVAFAAPEVAAKLPEHVRCVVIGSDEY-GRLAASDGRRAAAPAAVAVKQSDTA 199
BLAST of CB417426 vs. ExPASy Swiss-Prot
Match: 4CLL6_ORYSJ (4-coumarate--CoA ligase-like 6 OS=Oryza sativa subsp. japonica GN=4CLL6 PE=2 SV=2) HSP 1 Score: 75.8702 bits (185), Expect = 7.323e-14 Identity = 36/89 (40.45%), Postives = 58/89 (65.17%), Query Frame = 2 Query: 8 LSRSLKTRFSLSKNDVAYILSLASLHVPILYFSLLSLGVVISPANPLSSTSEVSHQIQLSKPSIAFATSHTSHKLPSNLRTILMDSPEF 274 L+ L L DVA ++S + L V +LYF+L+S+GVV+SPANP S+ E +HQ++LS+P+IAF + +LP ++ +++ S F Sbjct: 113 LAGGLWCSLGLRPGDVALVVSPSCLDVAVLYFALMSIGVVVSPANPASTADEYAHQVRLSRPAIAFVAPEVAARLPRHVSRVVIGSEVF 201 The following BLAST results are available for this feature:
BLAST of CB417426 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CB417426 ID=CB417426; Name=CB417426; organism=Citrus sinensis; type=EST; length=353bpback to top |