CB417427
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB417427 vs. ExPASy Swiss-Prot
Match: Y4117_ARATH (Putative disease resistance protein At4g11170 OS=Arabidopsis thaliana GN=At4g11170 PE=2 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 2.746e-30 Identity = 86/241 (35.68%), Postives = 131/241 (54.36%), Query Frame = 3 Query: 3 LECKHDYGQIVIPVFCRVDPSHVRRQTGTFGDYFSKL--GKRYPEKMHRWANALTEAANLSGFDSDVIRPESKLVEEIANEILERLEETFQSYNKDLVGVEWRIKEIESLLCTGFAGVYXXXXXXXXXXXXXXXADAVFNKISRHFEGSYFAQNVREAEETGGIKD------LQKELLSKLLN--DRNVWNIESQLNRLARKKFLIVFDDVTHPRQIESLIRRLDRLASGSRVIITTRDKQ 695 ++CK + G V+PVF +VDPS +R+QTG FG F + GK E+ H W ALT+AAN+ G E+ + I+ ++LE+L T DLVG+E I ++ESLLC GV A A++N+ +F S F +NVRE+ G+ D LQ+ LSKLL+ D V ++ + RL +K LI+ DDV + Q+++L + + SR+++TT++KQ Sbjct: 89 MKCKEEQGLKVMPVFYKVDPSDIRKQTGKFGMSFLETCCGKT-EERQHNWRRALTDAANILGDHPQNWDNEAYKITTISKDVLEKLNATPSRDFNDLVGMEAHIAKMESLLCLESQGVRIVGIWGPAGVGKTTIARALYNQYHENFNLSIFMENVRESYGEAGLDDYGLKLHLQQRFLSKLLDQKDLRVRHLGAIEERLKSQKVLIILDDVDNIEQLKALAKENQWFGNKSRIVVTTQNKQ 328
BLAST of CB417427 vs. ExPASy Swiss-Prot
Match: TMVRN_NICGU (TMV resistance protein N OS=Nicotiana glutinosa GN=N PE=1 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 6.763e-29 Identity = 86/245 (35.10%), Postives = 132/245 (53.88%), Query Frame = 3 Query: 3 LECKHDYGQIVIPVFCRVDPSHVRRQTGTFGDYFSKLGKRYP---EKMHRWANALTEAANLSGFDSDVIRPESKLVEEIANEILERLEETFQSYNKDLVGVEWRIKEIESLLCTGFAGVYXXXXXXXXXXXXXXXADAVFNKI------SRHFEGSYFAQNVREAEETGGIKDLQKELLSKLLNDRNVWNIE-----SQLNRLARKKFLIVFDDVTH-PRQIESLIRRLDRLASGSRVIITTRDK 692 +ECK + Q VIP+F VDPSHVR Q +F F + +Y E + RW AL EAANL G + + ++ + +I ++I +L + SY +++VG++ +++IESLL G GV A A+F+ + S F+G+ F ++++E + G+ LQ LLS+LL ++ +N E +RL KK LIV DD+ + +E L LD +GSR+IITTRDK Sbjct: 91 MECKTRFKQTVIPIFYDVDPSHVRNQKESFAKAFEEHETKYKDDVEGIQRWRIALNEAANLKGSCDNRDKTDADCIRQIVDQISSKLCKISLSYLQNIVGIDTHLEKIESLLEIGINGVRIMGIWGMGGVGKTTIARAIFDTLLGRMDSSYQFDGACFLKDIKENKR--GMHSLQNALLSELLREKANYNNEEDGKHQMASRLRSKKVLIVLDDIDNKDHYLEYLAGDLDWFGNGSRIIITTRDK 333
BLAST of CB417427 vs. ExPASy Swiss-Prot
Match: WRK19_ARATH (Probable WRKY transcription factor 19 OS=Arabidopsis thaliana GN=WRKY19 PE=2 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 3.603e-14 Identity = 56/237 (23.63%), Postives = 117/237 (49.37%), Query Frame = 3 Query: 3 LECKHDYGQIVIPVFCRVDPSHVRRQTGTFGDYFSKLGKRYPEKMHRWANALTEAANLSGFDSDVIRPESKLVEEIANEILERLEETFQSYNKDLVGVEWRIKEIESLLCTGFAGVYXXXXXXXXXXXXXXXADAVFNKISRHFEGSYFAQNVREAEETGGIKDLQKELLSKLLNDR----NVWNIESQL--NRLARKKFLIVFDDVTHPRQIESLIRRLDRLASGSRVIITTRDKQ 695 LE +H ++V P+F R+ P + + ++ + ++ +W AL E + G+ + ES+L++EI + L+ L + +++G++ +++EI SLLC V A+ +F KIS +E +++ + E G +++ LS++L + +I++ +RL RK+ L++ DDV R +++ + L+ GSR+I+T+R+++ Sbjct: 732 LEHQHTEDRVVYPIFYRLSPYDFVCNSKNYERFYLQ------DEPKKWQAALKEITQMPGYTL-TDKSESELIDEIVRDALKVL---CSADKVNMIGMDMQVEEILSLLCIESLDVRSIGIWGTVGIGKTTIAEEIFRKISVQYETCVVLKDLHKEVEVKGHDAVRENFLSEVLEVEPHVIRISDIKTSFLRSRLQRKRILVILDDVNDYRDVDTFLGTLNYFGPGSRIIMTSRNRR 958 The following BLAST results are available for this feature:
BLAST of CB417427 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CB417427 ID=CB417427; Name=CB417427; organism=Citrus sinensis; type=EST; length=696bpback to top |