CB417448

Overview
NameCB417448
Unique NameCB417448
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length691
Libraries
Library NameType
Mature peel (flavedo) cDNA subtraction librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB417448 vs. ExPASy Swiss-Prot
Match: CLAH7_CLAHE (Minor allergen Cla h 7 OS=Cladosporium herbarum GN=CLAH7 PE=1 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 7.672e-25
Identity = 63/144 (43.75%), Postives = 83/144 (57.64%), Query Frame = 2
Query:  263 KIFIVFYSMYGHVEGLAKRMXXXXXXXXXXEGLLYRVPETLTREALDHMKVPPRDDDIPEISAADLVEA-DGFLFGFPTRYGCMAAQMKAFFDSTGMLWKEGKLVGKPAGFFVSXXXXXXXXXXXAWTAITQLAHHGMLFVPIG 691
            KI I+FYS +GHV+ LA+              L YRVPETLT+E L  M  PP+DD IPEI+   ++E  D F  G PTRYG   AQ + F+D TG  W+ G   GK AG F+S           A  A++ L+HHG+++VP+G
Sbjct:    4 KIAIIFYSTWGHVQTLAEAEAKGIREAGGSVDL-YRVPETLTQEVLTKMHAPPKDDSIPEITDPFILEQYDRFPHGHPTRYGNFPAQWRTFWDRTGGQWQTGAFWGKYAGLFISTGTQGGGQESTALAAMSTLSHHGIIYVPLG 146          
BLAST of CB417448 vs. ExPASy Swiss-Prot
Match: YCP4_YEAST (Flavoprotein-like protein YCP4 OS=Saccharomyces cerevisiae GN=YCP4 PE=1 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.002e-24
Identity = 60/144 (41.67%), Postives = 81/144 (56.25%), Query Frame = 2
Query:  260 LKIFIVFYSMYGHVEGLAKRMXXXXXXXXXXEGLLYRVPETLTREALDHMKVPPRDDDIPEISAADLVEADGFLFGFPTRYGCMAAQMKAFFDSTGMLWKEGKLVGKPAGFFVSXXXXXXXXXXXAWTAITQLAHHGMLFVPIG 691
            +KI I+ YS YGH++ LA+ +            + YRV ETL  E L  M  P + +DIP  +   L+E D FLFG PTR+G + AQ  AF+D TG LW +G L GK AG FVS               ++ LAHHG++F+P+G
Sbjct:    2 VKIAIITYSTYGHIDVLAQAVKKGVEAAGGKADI-YRVEETLPDEVLTKMNAPQKPEDIPVATEKTLLEYDAFLFGVPTRFGNLPAQWSAFWDKTGGLWAKGSLNGKAAGIFVSTSSYGGGQESTVKACLSYLAHHGIIFLPLG 144          
BLAST of CB417448 vs. ExPASy Swiss-Prot
Match: ALTA7_ALTAL (Minor allergen Alt a 7 OS=Alternaria alternata GN=ALTA7 PE=1 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 2.232e-24
Identity = 61/144 (42.36%), Postives = 81/144 (56.25%), Query Frame = 2
Query:  263 KIFIVFYSMYGHVEGLAKRMXXXXXXXXXXEGLLYRVPETLTREALDHMKVPPRDDDIPEIS-AADLVEADGFLFGFPTRYGCMAAQMKAFFDSTGMLWKEGKLVGKPAGFFVSXXXXXXXXXXXAWTAITQLAHHGMLFVPIG 691
            KI IV+YSMYGH++ +A             +  L++V ETL +E LD M  PP+D  +P +   A L E DG LFG PTRYG   AQ K F+D TG  W++G   GK AG FVS           A T+++ L  HG ++VP+G
Sbjct:    4 KIAIVYYSMYGHIKKMADA-ELKGIQEAGGDAKLFQVAETLPQEVLDKMYAPPKDSSVPVLEDPAVLEEFDGILFGIPTRYGNFPAQFKTFWDKTGKQWQQGAFWGKYAGVFVSTGTLGGGQETTAITSMSTLVDHGFIYVPLG 146          
BLAST of CB417448 vs. ExPASy Swiss-Prot
Match: P25_SCHPO (P25 protein OS=Schizosaccharomyces pombe GN=obr1 PE=1 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.600e-22
Identity = 59/142 (41.55%), Postives = 79/142 (55.63%), Query Frame = 2
Query:  266 IFIVFYSMYGHVEGLAKRMXXXXXXXXXXEGLLYRVPETLTREALDHMKVPPRDDDIPEISAADLVEADGFLFGFPTRYGCMAAQMKAFFDSTGMLWKEGKLVGKPAGFFVSXXXXXXXXXXXAWTAITQLAHHGMLFVPIG 691
            + IV YS YGHV  LA+            + ++Y+ PETL+ E L+ M   P+ +  P ++   L + D FLFG+PTRYG   AQ + F+DSTG LW +G L GK  G F S           A TA+T   HHGM+FVP+G
Sbjct:    7 VAIVIYSTYGHVVKLAEA-EKAGIEKAGGKAVIYQFPETLSPEILEKMHAAPKPN-YPVVTLDVLTQYDAFLFGYPTRYGTPPAQFRTFWDSTGGLWVQGALHGKYFGQFFSTGTLGGGQESTALTAMTSFVHHGMIFVPLG 146          
BLAST of CB417448 vs. ExPASy Swiss-Prot
Match: WRBA_PHOLL (Flavoprotein wrbA OS=Photorhabdus luminescens subsp. laumondii GN=wrbA PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.037e-21
Identity = 62/145 (42.76%), Postives = 75/145 (51.72%), Query Frame = 2
Query:  263 KIFIVFYSMYGHVEGLAKRMXXXXXXXXXXEGLLYRVPETLTREALDHM--KVPPRDDDIPEISAADLVEADGFLFGFPTRYGCMAAQMKAFFDSTGMLWKEGKLVGKPAGFFVSXXXXXXXXXXXAWTAITQLAHHGMLFVPIG 691
            KI +++YSMYGH+E LA  +          E  + RVPET+  EA      KV   D   P  S  +LV+ D  + G PTR+G MA QM+ F D TG LW EGKL GK A  F S             T  T LAHHG + VPIG
Sbjct:    3 KILVLYYSMYGHIEALASAVAEGAKKVADVEVTIKRVPETIPPEAFTKAGGKV---DQSAPVASVQELVDYDAIIIGTPTRFGNMAGQMRNFLDQTGGLWAEGKLYGKVASVFTSTGVGGGQEMTITST-WTTLAHHGFIIVPIG 143          
BLAST of CB417448 vs. ExPASy Swiss-Prot
Match: WRBA_ENT38 (Flavoprotein wrbA OS=Enterobacter sp. (strain 638) GN=wrbA PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 3.940e-21
Identity = 55/143 (38.46%), Postives = 77/143 (53.85%), Query Frame = 2
Query:  263 KIFIVFYSMYGHVEGLAKRMXXXXXXXXXXEGLLYRVPETLTREALDHMKVPPRDDDIPEISAADLVEADGFLFGFPTRYGCMAAQMKAFFDSTGMLWKEGKLVGKPAGFFVSXXXXXXXXXXXAWTAITQLAHHGMLFVPIG 691
            K+ +++YSMYGH+E +A  +          E ++ RVPET+  EA   +K   +  + P+ +  +L + D  +FG PTR+G M+ QM+ F D TG LW  G L GK A  F S             T  T LAHHGM+ VPIG
Sbjct:    3 KVLVLYYSMYGHIETMAHAIAEGANKVDGVEVVIKRVPETMNAEAF--LKAGGKTQNAPQATPQELADYDAIIFGTPTRFGNMSGQMRTFLDQTGGLWATGALYGKLASVFSSTGTGGGQEQTITST-WTTLAHHGMVIVPIG 142          
BLAST of CB417448 vs. ExPASy Swiss-Prot
Match: WRBA_SERP5 (Flavoprotein wrbA OS=Serratia proteamaculans (strain 568) GN=wrbA PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 5.146e-21
Identity = 59/143 (41.26%), Postives = 73/143 (51.05%), Query Frame = 2
Query:  263 KIFIVFYSMYGHVEGLAKRMXXXXXXXXXXEGLLYRVPETLTREALDHMKVPPRDDDIPEISAADLVEADGFLFGFPTRYGCMAAQMKAFFDSTGMLWKEGKLVGKPAGFFVSXXXXXXXXXXXAWTAITQLAHHGMLFVPIG 691
            KI +++YSMYGH+E LA+ +          E  L RVPET+  EA        +D   P  S  +L + DG +FG PTR+G MA QM+ F D TG LW  G L GK    F S             T  T LAHHG + VPIG
Sbjct:    3 KILVLYYSMYGHIETLAEAVAEGARRVSGVEVTLKRVPETIPAEAFAKAG-GKQDQKAPVASPQELADYDGIIFGTPTRFGNMAGQMRTFLDQTGGLWASGALYGKVGSVFSSTGTGGGQEHTITST-WTTLAHHGFIIVPIG 143          
BLAST of CB417448 vs. ExPASy Swiss-Prot
Match: WRBA_KLEP3 (Flavoprotein wrbA OS=Klebsiella pneumoniae (strain 342) GN=wrbA PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 8.778e-21
Identity = 57/143 (39.86%), Postives = 75/143 (52.45%), Query Frame = 2
Query:  263 KIFIVFYSMYGHVEGLAKRMXXXXXXXXXXEGLLYRVPETLTREALDHMKVPPRDDDIPEISAADLVEADGFLFGFPTRYGCMAAQMKAFFDSTGMLWKEGKLVGKPAGFFVSXXXXXXXXXXXAWTAITQLAHHGMLFVPIG 691
            KI +++YSMYGH+E +A  +          E ++ RVPET+  EA    K   +  + P  +  +L E D  +FG PTR+G M+ QM+ F D TG LW  G L GK A  F S             T  T LAHHGM+ VPIG
Sbjct:    3 KILVLYYSMYGHIETMAHAVADGANRVDGVEVVVKRVPETMQAEAF--AKAGGKTQNAPVATPQELAEYDAIIFGTPTRFGNMSGQMRTFLDQTGGLWASGALYGKIASVFSSTGTGGGQEQTITST-WTTLAHHGMIIVPIG 142          
BLAST of CB417448 vs. ExPASy Swiss-Prot
Match: WRBA_GEOSL (Flavoprotein wrbA OS=Geobacter sulfurreducens GN=wrbA PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.146e-20
Identity = 57/144 (39.58%), Postives = 77/144 (53.47%), Query Frame = 2
Query:  260 LKIFIVFYSMYGHVEGLAKRMXXXXXXXXXXEGLLYRVPETLTREALDHM-KVPPRDD--DIPEISAADLVEADGFLFGFPTRYGCMAAQMKAFFDSTGMLWKEGKLVGKPAGFFVSXXXXXXXXXXXAWTAITQLAHHGMLFV 682
            + + IV+YSMYGH+  +A+ +          E +L RVPETL+ + L+ M  V P+     IP  +  +L  AD  +FG PTR+G M  QM+ F D+TG LW +G LVGK AG F S             T  T L H GM+ V
Sbjct:    1 MNVLIVYYSMYGHIHRMAEAVAEGVREVPGAEAVLRRVPETLSPDVLEKMGAVEPQKAFAHIPVATVDELASADAIIFGTPTRFGNMCGQMRQFLDATGGLWVKGSLVGKAAGVFTSSATQHGGQESTILTFHTFLLHQGMVIV 144          
BLAST of CB417448 vs. ExPASy Swiss-Prot
Match: WRBA_DESMR (Flavoprotein wrbA OS=Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1) GN=wrbA PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.497e-20
Identity = 52/144 (36.11%), Postives = 72/144 (50.00%), Query Frame = 2
Query:  260 LKIFIVFYSMYGHVEGLAKRMXXXXXXXXXXEGLLYRVPETLTREALDHMKVPPRD---DDIPEISAADLVEADGFLFGFPTRYGCMAAQMKAFFDSTGMLWKEGKLVGKPAGFFVSXXXXXXXXXXXAWTAITQLAHHGMLFV 682
            + + IV+YS+YGHV  +A+ +             L RVPETL+ E +  M           +P  +  +L +AD  +FG PTR+G M  QM+ F D+TG +W  G LVGKP G F S             + I  L HHGM+ V
Sbjct:    1 MNVLIVYYSLYGHVAAMAQAVAEGVHQVPGMTATLRRVPETLSEEVIGKMGATEAQKALSHVPACTLEELEDADAIVFGTPTRFGNMCGQMRQFLDATGQIWMRGGLVGKPGGVFCSTATQHGGQETTLMSFIQTLLHHGMIVV 144          
The following BLAST results are available for this feature:
BLAST of CB417448 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 146
Match NameE-valueIdentityDescription
CLAH7_CLAHE7.672e-2543.75Minor allergen Cla h 7 OS=Cladosporium herbarum GN... [more]
YCP4_YEAST1.002e-2441.67Flavoprotein-like protein YCP4 OS=Saccharomyces ce... [more]
ALTA7_ALTAL2.232e-2442.36Minor allergen Alt a 7 OS=Alternaria alternata GN=... [more]
P25_SCHPO1.600e-2241.55P25 protein OS=Schizosaccharomyces pombe GN=obr1 P... [more]
WRBA_PHOLL1.037e-2142.76Flavoprotein wrbA OS=Photorhabdus luminescens subs... [more]
WRBA_ENT383.940e-2138.46Flavoprotein wrbA OS=Enterobacter sp. (strain 638)... [more]
WRBA_SERP55.146e-2141.26Flavoprotein wrbA OS=Serratia proteamaculans (stra... [more]
WRBA_KLEP38.778e-2139.86Flavoprotein wrbA OS=Klebsiella pneumoniae (strain... [more]
WRBA_GEOSL1.146e-2039.58Flavoprotein wrbA OS=Geobacter sulfurreducens GN=w... [more]
WRBA_DESMR1.497e-2036.11Flavoprotein wrbA OS=Desulfovibrio magneticus (str... [more]

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Properties
Property NameValue
Genbank descriptionEST0557 Mature peel (flavedo) cDNA subtraction library Citrus sinensis cDNA clone 6P397 similar to 1,4-benzoquinone reductase (acc# NP_195393), mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB417448 ID=CB417448; Name=CB417448; organism=Citrus sinensis; type=EST; length=691bp
CCCACCGAATCAAGTAACAATTCTATTCCACGGTCGGGTTGGGTTATCAC
ATTATCCTCATTGAAGAATATCCTAATTCTCGATGGGGAAAGGCGGTGGC
TGTGTCCCAAGCAAGAAAAAAAATCCACGCCCTCCCGCCATCATCGCTGA
CTCTGAACATGACCCGCTTACCCCTCCGGCCCCGATCCCAATCTCTGACC
AAATCACTCATCCTAACGACACCACAACGACCTCCTCTCAGCTGCGAGAA
ATCACAAAATTGAAGATATTCATCGTGTTCTATTCCATGTATGGCCACGT
GGAGGGGTTGGCAAAGAGGATGAAGAAGGGCGTTGATGGCGTTGACGGTG
TGGAGGGCCTGCTGTATCGGGTGCCCGAGACGTTGACGAGGGAGGCCTTG
GACCACATGAAAGTGCCGCCGAGAGATGATGACATCCCGGAGATTTCGGC
GGCGGATTTAGTGGAGGCTGACGGGTTCTTGTTTGGGTTTCCGACGAGGT
ATGGGTGCATGGCGGCCCAAATGAAGGCTTTTTTCGACTCGACTGGCATG
TTGTGGAAAGAGGGTAAACTTGTCGGTAAACCCGCCGGTTTTTTTGTCAG
CACTGGCACTCAAGGTGGCGGTCAGGAAACCACTGCTTGGACTGCAATTA
CCCAGTTGGCCCACCATGGAATGCTATTTGTTCCTATTGGG
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