CB610502

Overview
NameCB610502
Unique NameCB610502
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length214
Libraries
Library NameType
Mature Albedocdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig27 contig Csv1_Contig27:338..551. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB610502 vs. ExPASy Swiss-Prot
Match: CALM_SPIOL (Calmodulin OS=Spinacia oleracea PE=1 SV=2)

HSP 1 Score: 107.842 bits (268), Expect = 1.701e-23
Identity = 53/53 (100.00%), Postives = 53/53 (100.00%), Query Frame = 1
Query:    4 QNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 162
            QNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK
Sbjct:   97 QNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 149          
BLAST of CB610502 vs. ExPASy Swiss-Prot
Match: CALM_MEDSA (Calmodulin OS=Medicago sativa GN=CAL1 PE=2 SV=2)

HSP 1 Score: 107.842 bits (268), Expect = 1.701e-23
Identity = 53/53 (100.00%), Postives = 53/53 (100.00%), Query Frame = 1
Query:    4 QNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 162
            QNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK
Sbjct:   97 QNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 149          
BLAST of CB610502 vs. ExPASy Swiss-Prot
Match: CALM_MALDO (Calmodulin OS=Malus domestica GN=CAM PE=3 SV=2)

HSP 1 Score: 107.842 bits (268), Expect = 1.701e-23
Identity = 53/53 (100.00%), Postives = 53/53 (100.00%), Query Frame = 1
Query:    4 QNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 162
            QNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK
Sbjct:   97 QNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 149          
BLAST of CB610502 vs. ExPASy Swiss-Prot
Match: CALM_MAIZE (Calmodulin OS=Zea mays GN=CALM1 PE=2 SV=2)

HSP 1 Score: 107.842 bits (268), Expect = 1.701e-23
Identity = 53/53 (100.00%), Postives = 53/53 (100.00%), Query Frame = 1
Query:    4 QNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 162
            QNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK
Sbjct:   97 QNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 149          
BLAST of CB610502 vs. ExPASy Swiss-Prot
Match: CALM_LILLO (Calmodulin OS=Lilium longiflorum PE=2 SV=2)

HSP 1 Score: 107.842 bits (268), Expect = 1.701e-23
Identity = 53/53 (100.00%), Postives = 53/53 (100.00%), Query Frame = 1
Query:    4 QNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 162
            QNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK
Sbjct:   97 QNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 149          
BLAST of CB610502 vs. ExPASy Swiss-Prot
Match: CALM_HORVU (Calmodulin OS=Hordeum vulgare GN=CAM PE=2 SV=2)

HSP 1 Score: 107.842 bits (268), Expect = 1.701e-23
Identity = 53/53 (100.00%), Postives = 53/53 (100.00%), Query Frame = 1
Query:    4 QNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 162
            QNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK
Sbjct:   97 QNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 149          
BLAST of CB610502 vs. ExPASy Swiss-Prot
Match: CALM_HELAN (Calmodulin OS=Helianthus annuus GN=CAM PE=2 SV=3)

HSP 1 Score: 107.842 bits (268), Expect = 1.701e-23
Identity = 53/53 (100.00%), Postives = 53/53 (100.00%), Query Frame = 1
Query:    4 QNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 162
            QNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK
Sbjct:   97 QNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 149          
BLAST of CB610502 vs. ExPASy Swiss-Prot
Match: CALM_EUPCH (Calmodulin OS=Euphorbia characias PE=2 SV=4)

HSP 1 Score: 107.842 bits (268), Expect = 1.701e-23
Identity = 53/53 (100.00%), Postives = 53/53 (100.00%), Query Frame = 1
Query:    4 QNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 162
            QNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK
Sbjct:   97 QNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 149          
BLAST of CB610502 vs. ExPASy Swiss-Prot
Match: CALM_BRYDI (Calmodulin OS=Bryonia dioica PE=2 SV=2)

HSP 1 Score: 107.842 bits (268), Expect = 1.701e-23
Identity = 53/53 (100.00%), Postives = 53/53 (100.00%), Query Frame = 1
Query:    4 QNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 162
            QNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK
Sbjct:   97 QNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 149          
BLAST of CB610502 vs. ExPASy Swiss-Prot
Match: CALM7_ARATH (Calmodulin-7 OS=Arabidopsis thaliana GN=CAM7 PE=1 SV=2)

HSP 1 Score: 107.842 bits (268), Expect = 1.701e-23
Identity = 53/53 (100.00%), Postives = 53/53 (100.00%), Query Frame = 1
Query:    4 QNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 162
            QNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK
Sbjct:   97 QNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 149          
The following BLAST results are available for this feature:
BLAST of CB610502 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 132
Match NameE-valueIdentityDescription
CALM_SPIOL1.701e-23100.00Calmodulin OS=Spinacia oleracea PE=1 SV=2[more]
CALM_MEDSA1.701e-23100.00Calmodulin OS=Medicago sativa GN=CAL1 PE=2 SV=2[more]
CALM_MALDO1.701e-23100.00Calmodulin OS=Malus domestica GN=CAM PE=3 SV=2[more]
CALM_MAIZE1.701e-23100.00Calmodulin OS=Zea mays GN=CALM1 PE=2 SV=2[more]
CALM_LILLO1.701e-23100.00Calmodulin OS=Lilium longiflorum PE=2 SV=2[more]
CALM_HORVU1.701e-23100.00Calmodulin OS=Hordeum vulgare GN=CAM PE=2 SV=2[more]
CALM_HELAN1.701e-23100.00Calmodulin OS=Helianthus annuus GN=CAM PE=2 SV=3[more]
CALM_EUPCH1.701e-23100.00Calmodulin OS=Euphorbia characias PE=2 SV=4[more]
CALM_BRYDI1.701e-23100.00Calmodulin OS=Bryonia dioica PE=2 SV=2[more]
CALM7_ARATH1.701e-23100.00Calmodulin-7 OS=Arabidopsis thaliana GN=CAM7 PE=1 ... [more]

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Properties
Property NameValue
Genbank descriptionALBEDO0003_IaF_D11 Mature Albedo Citrus sinensis cDNA clone ALBEDO0003_IaF_D11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB610502 ID=CB610502; Name=CB610502; organism=Citrus sinensis; type=EST; length=214bp
GGGCAGAATGGGTTCATTTCTGCTGCTGAACTCCGCCATGTGATGACAAA
TCTTGGTGAGAAGTTGACTGATGAGGAAGTTGATGAGATGATTCGTGAAG
CTGATGTGGATGGTGATGGCCAGATCAATTATGAAGAGTTTGTTAAAGTC
ATGATGGCCAAGTGAGAACCTCTCAACTATCACGCAAAAAAAAAAAAAAA
AAAAAAAAAAAAAA
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