CB610521
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB610521 vs. ExPASy Swiss-Prot
Match: PAP_CITUN (Plastid-lipid-associated protein, chloroplastic OS=Citrus unshiu GN=PAP PE=2 SV=1) HSP 1 Score: 187.193 bits (474), Expect = 4.917e-47 Identity = 95/96 (98.96%), Postives = 96/96 (100.00%), Query Frame = 3 Query: 27 GTPQVTDSLVIPENVEFLGQKIDLSPFKGILSSVQDTASSVAKTISSQPPLKFSISNSNAQSWLLTTYLDEDLRISRADAGSVFVFIKEGSPLLMP 314 GTPQVTDSLV+PENVEFLGQKIDLSPFKGILSSVQDTASSVAKTISSQPPLKFSISNSNAQSWLLTTYLDEDLRISRADAGSVFVFIKEGSPLLMP Sbjct: 228 GTPQVTDSLVLPENVEFLGQKIDLSPFKGILSSVQDTASSVAKTISSQPPLKFSISNSNAQSWLLTTYLDEDLRISRADAGSVFVFIKEGSPLLMP 323
BLAST of CB610521 vs. ExPASy Swiss-Prot
Match: LIPC_SOLTU (Light-induced protein, chloroplastic OS=Solanum tuberosum PE=1 SV=2) HSP 1 Score: 167.162 bits (422), Expect = 5.265e-41 Identity = 80/96 (83.33%), Postives = 92/96 (95.83%), Query Frame = 3 Query: 27 GTPQVTDSLVIPENVEFLGQKIDLSPFKGILSSVQDTASSVAKTISSQPPLKFSISNSNAQSWLLTTYLDEDLRISRADAGSVFVFIKEGSPLLMP 314 GTPQ+TDS+V+PENVEFLGQKIDLSPFKG+++SVQDTASSVAK+ISSQPP+KF I+N+NAQSWLLTTYLD++LRISR DAGSVFV IKEGSPLL P Sbjct: 231 GTPQLTDSIVLPENVEFLGQKIDLSPFKGLITSVQDTASSVAKSISSQPPIKFPITNNNAQSWLLTTYLDDELRISRGDAGSVFVLIKEGSPLLKP 326
BLAST of CB610521 vs. ExPASy Swiss-Prot
Match: LIPC_SOLDE (Light-induced protein, chloroplastic OS=Solanum demissum PE=1 SV=1) HSP 1 Score: 162.54 bits (410), Expect = 1.297e-39 Identity = 77/96 (80.21%), Postives = 90/96 (93.75%), Query Frame = 3 Query: 27 GTPQVTDSLVIPENVEFLGQKIDLSPFKGILSSVQDTASSVAKTISSQPPLKFSISNSNAQSWLLTTYLDEDLRISRADAGSVFVFIKEGSPLLMP 314 GTPQ+TDS+V+PENVEFLGQKID+SPFKG+++SVQDTASSV K+ISSQPP+KF I+N+NAQSWLLTTYLD++LRI R DAGSVFV IKEGSPLL P Sbjct: 231 GTPQLTDSIVLPENVEFLGQKIDVSPFKGLITSVQDTASSVVKSISSQPPIKFPITNNNAQSWLLTTYLDDELRIPRGDAGSVFVLIKEGSPLLKP 326
BLAST of CB610521 vs. ExPASy Swiss-Prot
Match: CHRC_CUCSA (Chromoplast-specific carotenoid-associated protein, chromoplast OS=Cucumis sativus GN=CHRC PE=1 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 6.024e-37 Identity = 73/94 (77.66%), Postives = 85/94 (90.43%), Query Frame = 3 Query: 27 GTPQVTDSLVIPENVEFLGQKIDLSPFKGILSSVQDTASSVAKTISSQPPLKFSISNSNAQSWLLTTYLDEDLRISRADAGSVFVFIKEGSPLL 308 GTPQ+TDS+VIP+NV+FLGQKID +PF GI+SS+QDTAS+VAKTISSQPP+KFSISN+ +SWLLTTYLDEDLRISR D GSVFV +KEGS L Sbjct: 227 GTPQLTDSIVIPDNVDFLGQKIDFTPFNGIISSLQDTASNVAKTISSQPPIKFSISNTRVESWLLTTYLDEDLRISRGDGGSVFVLLKEGSSFL 320
BLAST of CB610521 vs. ExPASy Swiss-Prot
Match: PAP2_BRACM (Plastid lipid-associated protein 2, chloroplastic OS=Brassica campestris GN=PAP2 PE=1 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 1.028e-36 Identity = 74/96 (77.08%), Postives = 86/96 (89.58%), Query Frame = 3 Query: 27 GTPQVTDSLVIPENVEFLGQKIDLSPFKGILSSVQDTASSVAKTISSQPPLKFSISNSNAQSWLLTTYLDEDLRISRADAGSVFVFIKEGSPLLMP 314 GTPQ+TDS+ IPE VEFLGQKIDL+P +G+L+SVQDTA+SVA+TISSQPPLKFS+ +AQSWLLTTYLD+D+RISR D GSVFV IKEGSPLL P Sbjct: 224 GTPQLTDSIEIPEYVEFLGQKIDLTPIRGLLTSVQDTATSVARTISSQPPLKFSLPGDSAQSWLLTTYLDKDIRISRGDGGSVFVLIKEGSPLLNP 319
BLAST of CB610521 vs. ExPASy Swiss-Prot
Match: PAP2_ARATH (Probable plastid-lipid-associated protein 2, chloroplastic OS=Arabidopsis thaliana GN=PAP2 PE=1 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 1.342e-36 Identity = 75/96 (78.12%), Postives = 85/96 (88.54%), Query Frame = 3 Query: 27 GTPQVTDSLVIPENVEFLGQKIDLSPFKGILSSVQDTASSVAKTISSQPPLKFSISNSNAQSWLLTTYLDEDLRISRADAGSVFVFIKEGSPLLMP 314 GTPQ+TDS+ IPE VE LGQKIDL+P +G+L+SVQDTASSVA+TISSQPPLKFS+ NAQSWLLTTYLD+D+RISR D GSVFV IKEGSPLL P Sbjct: 215 GTPQLTDSIEIPEYVEVLGQKIDLNPIRGLLTSVQDTASSVARTISSQPPLKFSLPADNAQSWLLTTYLDKDIRISRGDGGSVFVLIKEGSPLLNP 310
BLAST of CB610521 vs. ExPASy Swiss-Prot
Match: PAP1_ARATH (Probable plastid-lipid-associated protein 1, chloroplastic OS=Arabidopsis thaliana GN=PAP1 PE=1 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 8.699e-36 Identity = 73/96 (76.04%), Postives = 85/96 (88.54%), Query Frame = 3 Query: 27 GTPQVTDSLVIPENVEFLGQKIDLSPFKGILSSVQDTASSVAKTISSQPPLKFSISNSNAQSWLLTTYLDEDLRISRADAGSVFVFIKEGSPLLMP 314 GTPQ+TDS+ IPE+VE LGQKIDL+P KG+L+SVQDTASSVA+TIS+QPPLKFS+ + N QSWLLTTYLD+DLRISR D GSV+V IKEGS LL P Sbjct: 223 GTPQLTDSIEIPESVEVLGQKIDLNPIKGLLTSVQDTASSVARTISNQPPLKFSLPSDNTQSWLLTTYLDKDLRISRGDGGSVYVLIKEGSSLLNP 318
BLAST of CB610521 vs. ExPASy Swiss-Prot
Match: PAP1_BRACM (Plastid lipid-associated protein 1, chloroplastic OS=Brassica campestris GN=PAP1 PE=1 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 1.938e-35 Identity = 74/96 (77.08%), Postives = 84/96 (87.50%), Query Frame = 3 Query: 27 GTPQVTDSLVIPENVEFLGQKIDLSPFKGILSSVQDTASSVAKTISSQPPLKFSISNSNAQSWLLTTYLDEDLRISRADAGSVFVFIKEGSPLLMP 314 GTPQ+TDS+ IPE VE LGQKIDL+P KG+L+SVQDTASSVA+TISSQPPLKFS+ +AQSWLLTTYLD+DLRISR D GSVFV I+EGS LL P Sbjct: 232 GTPQLTDSIEIPEFVEVLGQKIDLNPIKGLLTSVQDTASSVARTISSQPPLKFSLPGDSAQSWLLTTYLDKDLRISRGDGGSVFVLIREGSSLLNP 327
BLAST of CB610521 vs. ExPASy Swiss-Prot
Match: PAP2_ORYSJ (Probable plastid-lipid-associated protein 2, chloroplastic OS=Oryza sativa subsp. japonica GN=PAP2 PE=2 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 4.182e-30 Identity = 62/94 (65.96%), Postives = 74/94 (78.72%), Query Frame = 3 Query: 27 GTPQVTDSLVIPENVEFLGQKIDLSPFKGILSSVQDTASSVAKTISSQPPLKFSISNSNAQSWLLTTYLDEDLRISRADAGSVFVFIKEGSPLL 308 GTPQ+TDS+V+PE E GQ IDL+P KGI SS+++ ASSVA+TIS QPPLK I NA+SWLLTTYLD++LRISR D S+FV KEGS LL Sbjct: 225 GTPQLTDSIVLPEKFELFGQNIDLTPLKGIFSSIENAASSVARTISGQPPLKIPIRTDNAESWLLTTYLDDELRISRGDGSSIFVLFKEGSTLL 318
BLAST of CB610521 vs. ExPASy Swiss-Prot
Match: PAP3_ORYSJ (Probable plastid-lipid-associated protein 3, chloroplastic OS=Oryza sativa subsp. japonica GN=PAP3 PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 2.717e-21 Identity = 51/97 (52.58%), Postives = 70/97 (72.16%), Query Frame = 3 Query: 21 SFGTPQVTDSLVIPENVEFLGQKIDLSPFKGILSSVQDTASSVAKTISSQPPLKFSI-SNSNAQSWLLTTYLDEDLRISRADAGSVFVFIKEGSPLL 308 SF P+++ S+ +P V+ GQKI L P + +L+ +Q +S+A +IS QPPLK I N+ A+SWLLTTYLD+DLRISR D G +F+ +KEGSPLL Sbjct: 276 SFQPPKISSSVDLPAEVDIFGQKISLGPVQQVLNPLQQAFASIAGSISGQPPLKLPIPGNNRARSWLLTTYLDKDLRISRGD-GGLFILVKEGSPLL 371 The following BLAST results are available for this feature:
BLAST of CB610521 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 13
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Sequences
The
following sequences are available for this feature:
EST sequence >CB610521 ID=CB610521; Name=CB610521; organism=Citrus sinensis; type=EST; length=575bpback to top |