CB610529

Overview
NameCB610529
Unique NameCB610529
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length355
Libraries
Library NameType
Mature Albedocdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5271 contig Csv1_Contig5271:531..885. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of CB610529 vs. ExPASy Swiss-Prot
Match: LEA5_CITSI (Late embryogenesis abundant protein Lea5 OS=Citrus sinensis GN=LEA5 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 2.508e-14
Identity = 38/53 (71.70%), Postives = 39/53 (73.58%), Query Frame = 2 
Query:    5 KNDFTPAVREXXXXXXXXXXXXITGYYRPDNRAVEIDPAELREMLLNHKVRAH 163
            KND  PAVRE            ITGYYRP+NRAVEIDPAELREMLLNHKVRAH
Sbjct:   45 KNDLRPAVREDSGASSAWAPDPITGYYRPENRAVEIDPAELREMLLNHKVRAH 97
The following BLAST results are available for this feature:
BLAST of CB610529 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
LEA5_CITSI2.508e-1471.70Late embryogenesis abundant protein Lea5 OS=Citrus... [more]
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Properties
Property NameValue
Genbank descriptionALBEDO0003_IVaF_H11 Mature Albedo Citrus sinensis cDNA clone ALBEDO0003_IVaF_H11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB610529 ID=CB610529; Name=CB610529; organism=Citrus sinensis; type=EST; length=355bp
GGGGAAAAATGATTTCACTCCTGCGGTGAGAGAGGATTCTGGGGCCTCTT
CTGCCTCGTCCCCAGATCCCATCACTGGGTACTACAGGCCGGATAATCGG
GCGGTCGAGATTGATCCAGCAGAGCTTCGAGAGATGCTGTTGAACCACAA
AGTCAGGGCACACTAGGGAGTGGTCGCGCATAGCAGCAGATCCTTTGCTG
TTAGCGGTGCTTTAACTTTTAAGTGATGTTGTTACAGTAGCAATTTTGAC
TCACTCTAAAGTCTTTGCTGTTGTTTTGATATCAACTGTTATTTACAACT
TTTAATAGTGCATTTCCATGATTTTGTCCGGAAAAAAAAAAAAAAAAAAA
AAAAA
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