CB610549

Overview
NameCB610549
Unique NameCB610549
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length685
Libraries
Library NameType
Mature Albedocdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13771 contig Csv1_Contig13771:1114..1798. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB610549 vs. ExPASy Swiss-Prot
Match: VPE_CITSI (Vacuolar-processing enzyme OS=Citrus sinensis PE=2 SV=1)

HSP 1 Score: 291.582 bits (745), Expect = 2.639e-78
Identity = 138/139 (99.28%), Postives = 139/139 (100.00%), Query Frame = 1
Query:    4 DADLLHFWDKYRKAPEGTPRKAEAQKQFFEAMSHRMHVDHSIKLIGKLLFGIEKGPEIMNTVRPAGQPLVDDWGCLKSLVRTFESHCGALSQYGMKHMRSLANICNTGIGKEKMAEASAQACENIPSGPWSSLDKGFSA 420
            DADLLHFWDKYRKAPEGTPRKAEAQKQFFEAMSHRMHVDHSIKLIGKLLFGIEKGPEI+NTVRPAGQPLVDDWGCLKSLVRTFESHCGALSQYGMKHMRSLANICNTGIGKEKMAEASAQACENIPSGPWSSLDKGFSA
Sbjct:  356 DADLLHFWDKYRKAPEGTPRKAEAQKQFFEAMSHRMHVDHSIKLIGKLLFGIEKGPEILNTVRPAGQPLVDDWGCLKSLVRTFESHCGALSQYGMKHMRSLANICNTGIGKEKMAEASAQACENIPSGPWSSLDKGFSA 494          
BLAST of CB610549 vs. ExPASy Swiss-Prot
Match: VPE1_PHAVU (Vacuolar-processing enzyme OS=Phaseolus vulgaris PE=1 SV=1)

HSP 1 Score: 229.565 bits (584), Expect = 1.232e-59
Identity = 102/139 (73.38%), Postives = 121/139 (87.05%), Query Frame = 1
Query:    4 DADLLHFWDKYRKAPEGTPRKAEAQKQFFEAMSHRMHVDHSIKLIGKLLFGIEKGPEIMNTVRPAGQPLVDDWGCLKSLVRTFESHCGALSQYGMKHMRSLANICNTGIGKEKMAEASAQACENIPSGPWSSLDKGFSA 420
            DADL+HFWDK+RKAPEG+P+K EA+KQ  E MSHRMH+D S++L+GKLLFGIEK PE++N VRPAG  LVDDW CLK++VRTFE+HCG+LSQYGMKHMRS AN+CN GI KE+M EASAQAC  IP+ PWSSL +GFSA
Sbjct:  346 DADLVHFWDKFRKAPEGSPKKNEARKQVLEVMSHRMHIDDSVELVGKLLFGIEKAPELLNAVRPAGSALVDDWDCLKTMVRTFETHCGSLSQYGMKHMRSFANMCNVGIKKEQMREASAQACVTIPANPWSSLQRGFSA 484          
BLAST of CB610549 vs. ExPASy Swiss-Prot
Match: VPEG_ARATH (Vacuolar-processing enzyme gamma-isozyme OS=Arabidopsis thaliana GN=At4g32940 PE=2 SV=2)

HSP 1 Score: 223.402 bits (568), Expect = 8.826e-58
Identity = 98/139 (70.50%), Postives = 120/139 (86.33%), Query Frame = 1
Query:    4 DADLLHFWDKYRKAPEGTPRKAEAQKQFFEAMSHRMHVDHSIKLIGKLLFGIEKGPEIMNTVRPAGQPLVDDWGCLKSLVRTFESHCGALSQYGMKHMRSLANICNTGIGKEKMAEASAQACENIPSGPWSSLDKGFSA 420
            DADL+HFW+KYRKAPEG+ RK EAQKQ  EAMSHR+H+D+S+ L+GK+LFGI +GPE++N VR AGQPLVDDW CLK+ VR FE HCG+LSQYG+KHMRS ANICN GI  E+M EA++QAC  +P+GPWSSL++GFSA
Sbjct:  356 DADLVHFWEKYRKAPEGSARKTEAQKQVLEAMSHRLHIDNSVILVGKILFGISRGPEVLNKVRSAGQPLVDDWNCLKNQVRAFERHCGSLSQYGIKHMRSFANICNAGIQMEQMEEAASQACTTLPTGPWSSLNRGFSA 494          
BLAST of CB610549 vs. ExPASy Swiss-Prot
Match: VPE_VICSA (Vacuolar-processing enzyme OS=Vicia sativa PE=1 SV=1)

HSP 1 Score: 222.631 bits (566), Expect = 1.505e-57
Identity = 100/139 (71.94%), Postives = 121/139 (87.05%), Query Frame = 1
Query:    4 DADLLHFWDKYRKAPEGTPRKAEAQKQFFEAMSHRMHVDHSIKLIGKLLFGIEKGPEIMNTVRPAGQPLVDDWGCLKSLVRTFESHCGALSQYGMKHMRSLANICNTGIGKEKMAEASAQACENIPSGPWSSLDKGFSA 420
            DADL+HFW+K+RKAPEG+ +K EA+KQ  EAMSHR H+D+S+KLIG+LLFGIEKG E+++ VRPAG PLVD+W CLK++V+TFE+HCG+LSQYGMKHMRS ANICN GI  E MAEASAQAC +IP+ PWSSL  GFSA
Sbjct:  355 DADLIHFWEKFRKAPEGSSQKNEAEKQVLEAMSHRKHIDNSVKLIGQLLFGIEKGTELLDVVRPAGSPLVDNWDCLKTMVKTFETHCGSLSQYGMKHMRSFANICNAGIPNEPMAEASAQACASIPANPWSSLQGGFSA 493          
BLAST of CB610549 vs. ExPASy Swiss-Prot
Match: VPEA_ARATH (Vacuolar-processing enzyme alpha-isozyme OS=Arabidopsis thaliana GN=At2g25940 PE=2 SV=2)

HSP 1 Score: 211.075 bits (536), Expect = 4.533e-54
Identity = 98/139 (70.50%), Postives = 116/139 (83.45%), Query Frame = 1
Query:    4 DADLLHFWDKYRKAPEGTPRKAEAQKQFFEAMSHRMHVDHSIKLIGKLLFGIEKGPEIMNTVRPAGQPLVDDWGCLKSLVRTFESHCGALSQYGMKHMRSLANICNTGIGKEKMAEASAQACENIPSGPWSSLDKGFSA 420
            DADL+HFW KY+KAPEG+ RK EAQKQ  EAMSHR+HVD+SI LIG LLFG+E G  ++N VRP+G+PLVDDW CLKSLVR FE HCG+LSQYG+KHMRS+AN+CN GI   +M EA+ QAC  IP+ PWSSLD+GFSA
Sbjct:  341 DADLVHFWHKYQKAPEGSARKVEAQKQVLEAMSHRLHVDNSILLIGILLFGLE-GHAVLNKVRPSGEPLVDDWDCLKSLVRAFERHCGSLSQYGIKHMRSIANMCNAGIQMRQMEEAAMQACPTIPTSPWSSLDRGFSA 478          
BLAST of CB610549 vs. ExPASy Swiss-Prot
Match: VPE_RICCO (Vacuolar-processing enzyme OS=Ricinus communis PE=1 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 2.499e-36
Identity = 69/139 (49.64%), Postives = 94/139 (67.63%), Query Frame = 1
Query:    4 DADLLHFWDKYRKAPEGTPRKAEAQKQFFEAMSHRMHVDHSIKLIGKLLFGIEKGPEIMNTVRPAGQPLVDDWGCLKSLVRTFESHCGALSQYGMKHMRSLANICNTGIGKEKMAEASAQACENIPSGPWSSLDKGFSA 420
            DA+L   W  Y+++  G+ +K E  +Q  +A+ HR H+D S++LIG LLFG +K   I+ +VR  G PLVDDWGCLKS+VR FE+ CG+L+QYGMKHMR+ ANICN G+    M EA   AC    +G W   ++G+SA
Sbjct:  359 DAELHFMWQLYKRSENGSEKKKEILQQIKDAIKHRSHLDSSMQLIGDLLFGPKKASAILKSVREPGSPLVDDWGCLKSMVRVFETCCGSLTQYGMKHMRTFANICNAGVSHTSMEEACNAACSGHDAGQWHPTNQGYSA 497          
BLAST of CB610549 vs. ExPASy Swiss-Prot
Match: VPE_SOYBN (Vacuolar-processing enzyme OS=Glycine max PE=2 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.050e-34
Identity = 66/139 (47.48%), Postives = 92/139 (66.19%), Query Frame = 1
Query:    4 DADLLHFWDKYRKAPEGTPRKAEAQKQFFEAMSHRMHVDHSIKLIGKLLFGIEKGPEIMNTVRPAGQPLVDDWGCLKSLVRTFESHCGALSQYGMKHMRSLANICNTGIGKEKMAEASAQACENIPSGPWSSLDKGFSA 420
            DA+L   W  Y+++   +  K +  KQ  E + HR H+D S++LIG LL+G  KG  ++ +VR  G  LVDDW CLKS+VR FE+HCG L+QYGMKHMR+ ANICN+G+ +  M EA   ACE   +G +   ++G+SA
Sbjct:  357 DAELFLLWQMYQRSNHQSENKTDILKQIAETVKHRKHIDGSVELIGVLLYGPGKGSSVLQSVRAPGSSLVDDWTCLKSMVRVFETHCGTLTQYGMKHMRAFANICNSGVSEASMEEACLAACEGYNAGLFHPSNRGYSA 495          
BLAST of CB610549 vs. ExPASy Swiss-Prot
Match: VPE2_PHAVU (Vacuolar-processing enzyme OS=Phaseolus vulgaris PE=2 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 1.980e-33
Identity = 65/139 (46.76%), Postives = 92/139 (66.19%), Query Frame = 1
Query:    4 DADLLHFWDKYRKAPEGTPRKAEAQKQFFEAMSHRMHVDHSIKLIGKLLFGIEKGPEIMNTVRPAGQPLVDDWGCLKSLVRTFESHCGALSQYGMKHMRSLANICNTGIGKEKMAEASAQACENIPSGPWSSLDKGFSA 420
            DA+LL  W  Y+++     +K +  KQ  E + HR H+D S++LIG LL+G EK   ++ +VR  G PLVDDW CLKS+VR +E+HCG+L+QYGMKHMR+ ANICN+G+ +  M +A   AC    +G     + G+SA
Sbjct:  355 DAELLFMWQVYQRSNHLPEKKTDILKQIEEIVKHRKHLDGSVELIGVLLYGPEKASSVLRSVRTTGLPLVDDWTCLKSMVRVYETHCGSLTQYGMKHMRAFANICNSGVSETSMEKACVAACGGYHAGLLHPSNTGYSA 493          
BLAST of CB610549 vs. ExPASy Swiss-Prot
Match: VPEB_ARATH (Vacuolar-processing enzyme beta-isozyme OS=Arabidopsis thaliana GN=At1g62710 PE=2 SV=3)

HSP 1 Score: 140.969 bits (354), Expect = 5.761e-33
Identity = 65/122 (53.28%), Postives = 83/122 (68.03%), Query Frame = 1
Query:    4 DADLLHFWDKYRKAPEGTPRKAEAQKQFFEAMSHRMHVDHSIKLIGKLLFGIEKGPEIMNTVRPAGQPLVDDWGCLKSLVRTFESHCGALSQYGMKHMRSLANICNTGIGKEKMAEASAQAC 369
            DADLL  W  YR + +G+ +K +  K+  E   HR H+D S++LI  +LFG      ++N VR  G PLVDDW CLKS+VR FE HCG+L+QYGMKHMR+ AN+CN G+ KE M EAS  AC
Sbjct:  348 DADLLFLWHMYRTSEDGSRKKDDTLKELTETTRHRKHLDASVELIATILFGPTMN--VLNLVREPGLPLVDDWECLKSMVRVFEEHCGSLTQYGMKHMRAFANVCNNGVSKELMEEASTAAC 467          
BLAST of CB610549 vs. ExPASy Swiss-Prot
Match: LEGU_CANEN (Legumain OS=Canavalia ensiformis PE=1 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 5.761e-33
Identity = 64/139 (46.04%), Postives = 90/139 (64.75%), Query Frame = 1
Query:    4 DADLLHFWDKYRKAPEGTPRKAEAQKQFFEAMSHRMHVDHSIKLIGKLLFGIEKGPEIMNTVRPAGQPLVDDWGCLKSLVRTFESHCGALSQYGMKHMRSLANICNTGIGKEKMAEASAQACENIPSGPWSSLDKGFSA 420
            DA+LL  W  Y+++     +K    +Q  E + HR H+D S++LIG LL+G  K   ++++VR  G PLVDDW CLKS+VR FE+HCG+L+QYGMKHMR+  N+CN+G+ K  M EA   AC    +G     + G+SA
Sbjct:  337 DAELLFMWQMYQRSNHQPEKKTHILEQITETVKHRNHLDGSVELIGVLLYGPGKSSSVLHSVRAPGLPLVDDWTCLKSMVRVFETHCGSLTQYGMKHMRAFGNVCNSGVSKASMEEACKAACGGYDAGLLYPSNTGYSA 475          
The following BLAST results are available for this feature:
BLAST of CB610549 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
VPE_CITSI2.639e-7899.28Vacuolar-processing enzyme OS=Citrus sinensis PE=2... [more]
VPE1_PHAVU1.232e-5973.38Vacuolar-processing enzyme OS=Phaseolus vulgaris P... [more]
VPEG_ARATH8.826e-5870.50Vacuolar-processing enzyme gamma-isozyme OS=Arabid... [more]
VPE_VICSA1.505e-5771.94Vacuolar-processing enzyme OS=Vicia sativa PE=1 SV... [more]
VPEA_ARATH4.533e-5470.50Vacuolar-processing enzyme alpha-isozyme OS=Arabid... [more]
VPE_RICCO2.499e-3649.64Vacuolar-processing enzyme OS=Ricinus communis PE=... [more]
VPE_SOYBN1.050e-3447.48Vacuolar-processing enzyme OS=Glycine max PE=2 SV=... [more]
VPE2_PHAVU1.980e-3346.76Vacuolar-processing enzyme OS=Phaseolus vulgaris P... [more]
VPEB_ARATH5.761e-3353.28Vacuolar-processing enzyme beta-isozyme OS=Arabido... [more]
LEGU_CANEN5.761e-3346.04Legumain OS=Canavalia ensiformis PE=1 SV=1[more]
back to top
Properties
Property NameValue
Genbank descriptionALBEDO0003_IVaF_D06 Mature Albedo Citrus sinensis cDNA clone ALBEDO0003_IVaF_D06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB610549 ID=CB610549; Name=CB610549; organism=Citrus sinensis; type=EST; length=685bp
GGGGATGCCGATCTCTTGCATTTCTGGGACAAGTACCGCAAGGCACCTGA
GGGCACTCCTAGGAAGGCTGAAGCTCAGAAGCAGTTTTTTGAAGCAATGT
CTCATAGAATGCATGTAGACCACAGCATCAAACTTATTGGAAAGCTCTTA
TTTGGAATTGAGAAAGGTCCAGAGATCATGAACACTGTTCGACCTGCTGG
TCAGCCTCTTGTTGATGACTGGGGCTGCCTCAAATCACTGGTGAGGACTT
TTGAGTCGCACTGTGGAGCTCTATCGCAATATGGAATGAAGCACATGCGT
TCTCTTGCAAACATCTGTAATACAGGAATTGGGAAAGAGAAGATGGCGGA
AGCATCAGCACAAGCCTGTGAAAATATTCCTTCTGGTCCTTGGAGTTCTC
TCGACAAAGGATTCAGTGCATAAAGAAGCCGAGAACTGTGCGAATATCAT
AAGCCAGTTCTTGAAATATGTTAGTTTTCATTATAGTCGCCAATATGGCA
ATATCTATTTTCATTTGGCTGATGATTGCTTCCATTTATGGCAATGTCTA
TTTTCATTTGGCTGGTGATTGCTTCCTTGTAATTATTATATTTAAAAGCT
CTTCCCTGCCAGACCGCAGTTGTAATTTGATAGAATATATTTTGGATGGA
TGCGATGCTATTTTATGCTTATGGAGCTATATTTG
back to top