CB610559
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB610559 vs. ExPASy Swiss-Prot
Match: LSM3_MOUSE (U6 snRNA-associated Sm-like protein LSm3 OS=Mus musculus GN=Lsm3 PE=2 SV=2) HSP 1 Score: 98.2117 bits (243), Expect = 1.374e-20 Identity = 45/57 (78.95%), Postives = 55/57 (96.49%), Query Frame = 3 Query: 63 SAVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVKKVVTTVEIED 233 + V+EPLDLIRLSLDERIYVK+R+DRELRG+LHAYDQHLNMILGDV++ VTT+EI++ Sbjct: 12 NTVEEPLDLIRLSLDERIYVKMRNDRELRGRLHAYDQHLNMILGDVEETVTTIEIDE 68
BLAST of CB610559 vs. ExPASy Swiss-Prot
Match: LSM3_HUMAN (U6 snRNA-associated Sm-like protein LSm3 OS=Homo sapiens GN=LSM3 PE=1 SV=2) HSP 1 Score: 98.2117 bits (243), Expect = 1.374e-20 Identity = 45/57 (78.95%), Postives = 55/57 (96.49%), Query Frame = 3 Query: 63 SAVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVKKVVTTVEIED 233 + V+EPLDLIRLSLDERIYVK+R+DRELRG+LHAYDQHLNMILGDV++ VTT+EI++ Sbjct: 12 NTVEEPLDLIRLSLDERIYVKMRNDRELRGRLHAYDQHLNMILGDVEETVTTIEIDE 68
BLAST of CB610559 vs. ExPASy Swiss-Prot
Match: LSM3_BOVIN (U6 snRNA-associated Sm-like protein LSm3 OS=Bos taurus GN=LSM3 PE=3 SV=3) HSP 1 Score: 98.2117 bits (243), Expect = 1.374e-20 Identity = 45/57 (78.95%), Postives = 55/57 (96.49%), Query Frame = 3 Query: 63 SAVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVKKVVTTVEIED 233 + V+EPLDLIRLSLDERIYVK+R+DRELRG+LHAYDQHLNMILGDV++ VTT+EI++ Sbjct: 12 NTVEEPLDLIRLSLDERIYVKMRNDRELRGRLHAYDQHLNMILGDVEETVTTIEIDE 68
BLAST of CB610559 vs. ExPASy Swiss-Prot
Match: LSM3_DICDI (Probable U6 snRNA-associated Sm-like protein LSm3 OS=Dictyostelium discoideum GN=lsm3 PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 1.286e-18 Identity = 43/63 (68.25%), Postives = 52/63 (82.54%), Query Frame = 3 Query: 45 MASEQESAVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVKKVVTTVEIED 233 M +E V+EPLDLIRLSLDERI+VK+R DRELRGKLHAYDQHLNMIL DV++ + VE ++ Sbjct: 1 MDKREEGTVEEPLDLIRLSLDERIFVKMRQDRELRGKLHAYDQHLNMILSDVEETIKVVEKDE 63
BLAST of CB610559 vs. ExPASy Swiss-Prot
Match: LSM3_SCHPO (Probable U6 snRNA-associated Sm-like protein LSm3 OS=Schizosaccharomyces pombe GN=lsm3 PE=1 SV=2) HSP 1 Score: 86.2705 bits (212), Expect = 5.402e-17 Identity = 39/60 (65.00%), Postives = 49/60 (81.67%), Query Frame = 3 Query: 54 EQESAVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVKKVVTTVEIED 233 E AV EPLDL+RLSLDE +YVKLR DREL G+LHAYD+HLNM+LGD +++VT + E+ Sbjct: 2 ESAQAVAEPLDLVRLSLDEIVYVKLRGDRELNGRLHAYDEHLNMVLGDAEEIVTIFDDEE 61 The following BLAST results are available for this feature:
BLAST of CB610559 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CB610559 ID=CB610559; Name=CB610559; organism=Citrus sinensis; type=EST; length=233bpback to top |