CB610573

Overview
NameCB610573
Unique NameCB610573
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length719
Libraries
Library NameType
Mature Albedocdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1283 contig Csv1_Contig1283:117..821. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB610573 vs. ExPASy Swiss-Prot
Match: HSP11_SOLPE (17.7 kDa class I heat shock protein OS=Solanum peruvianum PE=2 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 2.143e-33
Identity = 80/154 (51.95%), Postives = 94/154 (61.04%), Query Frame = 3
Query:   84 MSLIPSIFGNR---SVFDPFSSDVWAPL------GSSSNEVSTFASAQVDWKETPEAHVFKADLPXXXXXXXXXXXXXXXXLQISGERSVEKEDKNDKWRRVEXXXXXXXXXXXXPENAKIDQVKASMENGVLXXXXXXXXXXXXXXXSIQITG 518
            MSLIP IFG+R   S+FDPFS DV+ P       G++S E S FA+ ++DWKETPEAHVFKADLP                LQISGER++EKEDKNDKW+RVE            PENAK+DQVKASMENGVL               SI+I+G
Sbjct:    1 MSLIPRIFGDRRSSSMFDPFSIDVFDPFRELGFPGTNSGETSAFANTRIDWKETPEAHVFKADLPGLKLEEVKVEVEEDRVLQISGERNMEKEDKNDKWQRVERSSGKFMRRFRLPENAKMDQVKASMENGVLTVTVPKEEMKKPDVKSIEISG 154          
BLAST of CB610573 vs. ExPASy Swiss-Prot
Match: HSP12_SOLPE (17.6 kDa class I heat shock protein OS=Solanum peruvianum PE=2 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 8.144e-33
Identity = 83/154 (53.90%), Postives = 93/154 (60.39%), Query Frame = 3
Query:   84 MSLIPSIFGNR---SVFDPFSSDVWAP---LG---SSSNEVSTFASAQVDWKETPEAHVFKADLPXXXXXXXXXXXXXXXXLQISGERSVEKEDKNDKWRRVEXXXXXXXXXXXXPENAKIDQVKASMENGVLXXXXXXXXXXXXXXXSIQITG 518
            MSLIP IFG+R   SVFDPFS DV+ P   LG   S+S E S FA+ ++DWKETPEAHVFKADLP                LQISGER+VEKEDKND W RVE            PENAK+DQVKASMENGVL               SI+I+G
Sbjct:    1 MSLIPRIFGDRRSTSVFDPFSIDVFDPFKELGFTVSNSGETSAFANTRIDWKETPEAHVFKADLPGLKKEEVKVEVEEDRVLQISGERNVEKEDKNDTWHRVERSSGKFMRRFRLPENAKMDQVKASMENGVLTVTVPKEEVNNPDVKSIEISG 154          
BLAST of CB610573 vs. ExPASy Swiss-Prot
Match: HSP11_SOYBN (17.3 kDa class I heat shock protein OS=Glycine max GN=HSP17.3-B PE=3 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 1.064e-32
Identity = 81/153 (52.94%), Postives = 87/153 (56.86%), Query Frame = 3
Query:   84 MSLIPSIFGNR--SVFDPFSSDVWAPL------GSSSNEVSTFASAQVDWKETPEAHVFKADLPXXXXXXXXXXXXXXXXLQISGERSVEKEDKNDKWRRVEXXXXXXXXXXXXPENAKIDQVKASMENGVLXXXXXXXXXXXXXXXSIQITG 518
            MSLIPS FG R  SVFDPFS DVW P        S S E S F S +VDWKETPEAHVFKAD+P                LQISGER+VEKEDKND W RVE            PENAK+DQVKASMENGVL               +I I+G
Sbjct:    1 MSLIPSFFGGRRSSVFDPFSLDVWDPFKDFPFPSSLSAENSAFVSTRVDWKETPEAHVFKADIPGLKKEEVKLEIQDGRVLQISGERNVEKEDKNDTWHRVERSSGKLVRRFRLPENAKVDQVKASMENGVLTVTVPKEEIKKPDVKAIDISG 153          
BLAST of CB610573 vs. ExPASy Swiss-Prot
Match: HSP12_MEDSA (18.2 kDa class I heat shock protein OS=Medicago sativa GN=HSP18.2 PE=2 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 2.620e-31
Identity = 79/158 (50.00%), Postives = 87/158 (55.06%), Query Frame = 3
Query:   84 MSLIPSIFGNR--SVFDPFSSDVWAPL-----------GSSSNEVSTFASAQVDWKETPEAHVFKADLPXXXXXXXXXXXXXXXXLQISGERSVEKEDKNDKWRRVEXXXXXXXXXXXXPENAKIDQVKASMENGVLXXXXXXXXXXXXXXXSIQITG 518
            MSLIPS FG R  +VFDPFS DVW P             S   E S F S +VDWKETPEAHVFKADLP                LQISGERSVEKEDKND+W R+E            PENAK+DQVKA+MENGVL               +I I+G
Sbjct:    1 MSLIPSFFGGRRSNVFDPFSLDVWDPFKDFPFNNSALSASFPRENSAFVSTRVDWKETPEAHVFKADLPGMKKEEVKVEIEDDRVLQISGERSVEKEDKNDQWHRLERSSGKFMRRFRLPENAKMDQVKAAMENGVLTVTVPKEEVKKPEVKTIDISG 158          
BLAST of CB610573 vs. ExPASy Swiss-Prot
Match: HSP11_SOLLC (17.8 kDa class I heat shock protein OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 2.620e-31
Identity = 77/154 (50.00%), Postives = 90/154 (58.44%), Query Frame = 3
Query:   84 MSLIPSIFGNR---SVFDPFSSDVWAPL------GSSSNEVSTFASAQVDWKETPEAHVFKADLPXXXXXXXXXXXXXXXXLQISGERSVEKEDKNDKWRRVEXXXXXXXXXXXXPENAKIDQVKASMENGVLXXXXXXXXXXXXXXXSIQITG 518
            MSLIP IFG+R   S+FDPFS DV+ P        ++S E S FA+ ++DWKETPE HVFK DLP                LQISGER+VEKEDKNDKW R+E            PENAK+DQVKASMENGVL               SI+I+G
Sbjct:    1 MSLIPRIFGDRRSSSMFDPFSIDVFDPFRELGFPSTNSGESSAFANTRIDWKETPEPHVFKVDLPGLKKEEVKVEVEEDRVLQISGERNVEKEDKNDKWHRMERSSGKFMRRFRLPENAKMDQVKASMENGVLTVTVPKEEVKKPEVKSIEISG 154          
BLAST of CB610573 vs. ExPASy Swiss-Prot
Match: HSP11_PEA (18.1 kDa class I heat shock protein OS=Pisum sativum GN=HSP18.1 PE=2 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 2.620e-31
Identity = 80/158 (50.63%), Postives = 87/158 (55.06%), Query Frame = 3
Query:   84 MSLIPSIFGNR--SVFDPFSSDVWAPL-----------GSSSNEVSTFASAQVDWKETPEAHVFKADLPXXXXXXXXXXXXXXXXLQISGERSVEKEDKNDKWRRVEXXXXXXXXXXXXPENAKIDQVKASMENGVLXXXXXXXXXXXXXXXSIQITG 518
            MSLIPS F  R  +VFDPFS DVW PL            S   E   F S +VDWKETPEAHVFKADLP                LQISGERSVEKEDKND+W RVE            PENAK+D+VKASMENGVL               SI+I+G
Sbjct:    1 MSLIPSFFSGRRSNVFDPFSLDVWDPLKDFPFSNSSPSASFPRENPAFVSTRVDWKETPEAHVFKADLPGLKKEEVKVEVEDDRVLQISGERSVEKEDKNDEWHRVERSSGKFLRRFRLPENAKMDKVKASMENGVLTVTVPKEEIKKAEVKSIEISG 158          
BLAST of CB610573 vs. ExPASy Swiss-Prot
Match: HSP13_SOYBN (17.5 kDa class I heat shock protein OS=Glycine max GN=HSP17.5-M PE=3 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 3.421e-31
Identity = 77/153 (50.33%), Postives = 89/153 (58.17%), Query Frame = 3
Query:   84 MSLIPSIFGNR--SVFDPFSSDVWAPLG------SSSNEVSTFASAQVDWKETPEAHVFKADLPXXXXXXXXXXXXXXXXLQISGERSVEKEDKNDKWRRVEXXXXXXXXXXXXPENAKIDQVKASMENGVLXXXXXXXXXXXXXXXSIQITG 518
            MSLIPSIFG R  +VFDPFS DVW P        S S E S F + +VDWKETPEAHVF+AD+P                LQISGER++EKEDKND W RVE            PENAK++QVKASMENGVL               +I+I+G
Sbjct:    1 MSLIPSIFGGRRSNVFDPFSLDVWDPFKDFHFPTSLSAENSAFVNTRVDWKETPEAHVFEADIPGLKKEEVKVQIEDDRVLQISGERNLEKEDKNDTWHRVERSSGNFMRRFRLPENAKVEQVKASMENGVLTVTVPKEEVKKPDVKAIEISG 153          
BLAST of CB610573 vs. ExPASy Swiss-Prot
Match: HS181_ARATH (18.1 kDa class I heat shock protein OS=Arabidopsis thaliana GN=HSP18.1 PE=2 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 3.421e-31
Identity = 77/161 (47.83%), Postives = 91/161 (56.52%), Query Frame = 3
Query:   84 MSLIPSIFGNR--SVFDPFSSDVWAPL------------GSSSNEVSTFASAQVDWKETPEAHVFKADLPXXXXXXXXXXXXXXXXLQISGERSVEKEDKNDKWRRVEXXXXXXXXXXXXPENAKIDQVKASMENGVLXXXXXXXXXXXXXXXSIQITG*N 524
            MSLIPSIFG R  +VFDPFS D+W P              S++ +V+ F +A+VDWKETPEAHVFKADLP                LQISGERS E E+KNDKW RVE            PENAK+++VKA+MENGVL               SI I+G N
Sbjct:    1 MSLIPSIFGGRRSNVFDPFSQDLWDPFEGFFTPSSALANASTARDVAAFTNARVDWKETPEAHVFKADLPGLKKEEVKVEVEDKNVLQISGERSKENEEKNDKWHRVERASGKFMRRFRLPENAKMEEVKATMENGVLTVVVPKAPEKKPQVKSIDISGAN 161          
BLAST of CB610573 vs. ExPASy Swiss-Prot
Match: HSP14_SOYBN (17.5 kDa class I heat shock protein OS=Glycine max GN=HSP17.5-E PE=3 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 7.622e-31
Identity = 76/154 (49.35%), Postives = 87/154 (56.49%), Query Frame = 3
Query:   84 MSLIPSIFGNR--SVFDPFSSDVW-------APLGSSSNEVSTFASAQVDWKETPEAHVFKADLPXXXXXXXXXXXXXXXXLQISGERSVEKEDKNDKWRRVEXXXXXXXXXXXXPENAKIDQVKASMENGVLXXXXXXXXXXXXXXXSIQITG 518
            MSLIP  FG R  +VFDPFS D+W        P  S S E S F S +VDWKETPEAHVFKAD+P                LQISGER+VEKEDKND W RVE            PENAK+++VKASMENGVL               +I+I+G
Sbjct:    1 MSLIPGFFGGRRSNVFDPFSLDMWDPFKDFHVPTSSVSAENSAFVSTRVDWKETPEAHVFKADIPGLKKEEVKVQIEDDRVLQISGERNVEKEDKNDTWHRVERSSGKFTRRFRLPENAKVNEVKASMENGVLTVTVPKEEVKKPDVKAIEISG 154          
BLAST of CB610573 vs. ExPASy Swiss-Prot
Match: HSP16_SOYBN (18.5 kDa class I heat shock protein OS=Glycine max GN=HSP18.5-C PE=3 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.300e-30
Identity = 79/161 (49.07%), Postives = 90/161 (55.90%), Query Frame = 3
Query:   84 MSLIPSIFGNR--SVFDPFSSDVWAP---------LGSSS-----NEVSTFASAQVDWKETPEAHVFKADLPXXXXXXXXXXXXXXXXLQISGERSVEKEDKNDKWRRVEXXXXXXXXXXXXPENAKIDQVKASMENGVLXXXXXXXXXXXXXXXSIQITG 518
            MSLIP+ FG R  +VFDPFS DVW P         L S+S      E S F S +VDWKETPEAHVFKAD+P                LQISGER+VEKEDKND W RVE            PENAK++QVKASMENGVL               +I+I+G
Sbjct:    1 MSLIPNFFGGRRNNVFDPFSLDVWDPFKDFPFPNTLSSASFPEFSRENSAFVSTRVDWKETPEAHVFKADIPGLKKEEVKVQIEDDKVLQISGERNVEKEDKNDTWHRVERSSGKFMRRFRLPENAKVEQVKASMENGVLTVTVPKEEVKKPDVKAIEISG 161          
The following BLAST results are available for this feature:
BLAST of CB610573 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 36
Match NameE-valueIdentityDescription
HSP11_SOLPE2.143e-3351.9517.7 kDa class I heat shock protein OS=Solanum per... [more]
HSP12_SOLPE8.144e-3353.9017.6 kDa class I heat shock protein OS=Solanum per... [more]
HSP11_SOYBN1.064e-3252.9417.3 kDa class I heat shock protein OS=Glycine max... [more]
HSP12_MEDSA2.620e-3150.0018.2 kDa class I heat shock protein OS=Medicago sa... [more]
HSP11_SOLLC2.620e-3150.0017.8 kDa class I heat shock protein OS=Solanum lyc... [more]
HSP11_PEA2.620e-3150.6318.1 kDa class I heat shock protein OS=Pisum sativ... [more]
HSP13_SOYBN3.421e-3150.3317.5 kDa class I heat shock protein OS=Glycine max... [more]
HS181_ARATH3.421e-3147.8318.1 kDa class I heat shock protein OS=Arabidopsis... [more]
HSP14_SOYBN7.622e-3149.3517.5 kDa class I heat shock protein OS=Glycine max... [more]
HSP16_SOYBN1.300e-3049.0718.5 kDa class I heat shock protein OS=Glycine max... [more]

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Properties
Property NameValue
Genbank descriptionALBEDO0003_IVaF_A10 Mature Albedo Citrus sinensis cDNA clone ALBEDO0003_IVaF_A10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB610573 ID=CB610573; Name=CB610573; organism=Citrus sinensis; type=EST; length=719bp
GGGGATCAGTAAAGAGTGAAGACCCAATAGATAAATAAGCAAACGATTTC
GAAGAAAGTGCTCGTCGCTTTGATTAAGCAAAAATGTCTTTGATTCCATC
TATATTCGGAAACAGGAGCGTGTTCGACCCATTTTCTTCGGACGTTTGGG
CGCCCCTTGGCTCCTCCAGCAATGAGGTGTCAACATTTGCCAGTGCTCAA
GTCGATTGGAAAGAAACCCCGGAAGCTCATGTTTTCAAGGCGGATCTTCC
GGGGCTCAAGAAAGAGGAAGGGAAGGTTGAAGTTGAGGACGGGAGAGTCC
TTCAGATCAGCGGTGAGAGGAGCGTCGAGAAGGAAGACAAGAACGACAAA
TGGCGGCGTGTTGAGAGGGGCCGCGGCAAGTTCCTGAGGAGGTTCCGGTT
GCCTGAGAATGCCAAGATCGATCAAGTTAAGGCATCAATGGAGAATGGTG
TCCTCACCGTCACTGTTCCCAAAGTGGAGGAGAAGAAGCCTGAGGTCAAA
TCCATTCAGATCACTGGTTGAAACTCTCCGTTAATTGCAGCCTTTTTAAT
TTGGTTCTTGTTTTGTTCTGTGTGTTAATGAACGATGTGCGATTGCTGTT
AAGTGTGTCGCATACTTTTGTTCATGTAATGTGTTGTCGACTGCTTTTTT
AAGTAATTTTAAGTAATAAAAATATGTTGTTTTCTTACGTAAAAAAAAAA
AAAAAAAAAAAAAAAAAAA
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