CB610579

Overview
NameCB610579
Unique NameCB610579
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length706
Libraries
Library NameType
Mature Albedocdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13796 contig Csv1_Contig13796:1..704. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB610579 vs. ExPASy Swiss-Prot
Match: PER42_ARATH (Peroxidase 42 OS=Arabidopsis thaliana GN=PER42 PE=1 SV=2)

HSP 1 Score: 337.806 bits (865), Expect = 3.378e-92
Identity = 161/210 (76.67%), Postives = 186/210 (88.57%), Query Frame = 3
Query:   75 LLLALRSFSAVSLRSALAENEEDPGLVMNFYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDLTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHRIGRTHCVKLVHRLYPEI 704
            +++A+    A+S  S  A  E +PGL+MNFYKDTCPQAEDI++EQVKLLYKRHKNTAFSWLRNIFHDCAV+SCDASLLLD TR+ L EKE DRSFG+RNFRYIE IKEA+ERECPGVVSC+DILVLS R+G+ A+GGPYIPLKTGRRDG KSR ++LE YLPDHN+S+SVVLE+F +IGID PGLVALLGSH +GRTHCVKLVHRLYPE+
Sbjct:    7 MMVAILCLWALSATSE-AVTEAEPGLMMNFYKDTCPQAEDIVREQVKLLYKRHKNTAFSWLRNIFHDCAVESCDASLLLDSTRRELGEKEHDRSFGLRNFRYIEEIKEALERECPGVVSCSDILVLSAREGIEAVGGPYIPLKTGRRDGLKSRTDMLESYLPDHNESISVVLEKFKSIGIDTPGLVALLGSHSVGRTHCVKLVHRLYPEV 215          
BLAST of CB610579 vs. ExPASy Swiss-Prot
Match: PER21_ARATH (Peroxidase 21 OS=Arabidopsis thaliana GN=PER21 PE=1 SV=1)

HSP 1 Score: 235.728 bits (600), Expect = 1.808e-61
Identity = 112/186 (60.22%), Postives = 143/186 (76.88%), Query Frame = 3
Query:  150 LVMNFYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDLTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIP-LKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHRIGRTHCVKLVHRLYPEI 704
            L MN+YK++CP+AE+II++QV+ LY +H NTA SWLRN+FHDC V+SCDASLLL+  R   SE++  RSFGMRNF+Y++ IK+A+E+ECP  VSCADI+ LS RDG+V L GP I  +KTGRRD R S    +E  +P+HNDS+S V+  F +IGID    VALLG+H +GR HCV LVHRLYP I
Sbjct:   30 LEMNYYKESCPKAEEIIRQQVETLYYKHGNTAVSWLRNLFHDCVVKSCDASLLLETARGVESEQKSKRSFGMRNFKYVKIIKDALEKECPSTVSCADIVALSARDGIVMLKGPKIEMIKTGRRDSRGSYLGDVETLIPNHNDSLSSVISTFNSIGIDVEATVALLGAHSVGRVHCVNLVHRLYPTI 215          
BLAST of CB610579 vs. ExPASy Swiss-Prot
Match: PER48_ARATH (Putative Peroxidase 48 OS=Arabidopsis thaliana GN=PER48 PE=2 SV=3)

HSP 1 Score: 155.992 bits (393), Expect = 1.821e-37
Identity = 75/192 (39.06%), Postives = 120/192 (62.50%), Query Frame = 3
Query:  120 ALAENEEDPGLVMNFYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDLTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHRIGRTHCVKLVHRLY 695
            ++AE+ +   L  ++Y+++CP AE II + ++ +Y    + A   +R +FHDC ++ CDAS+LLD      SEK+   +  ++ F  I+ +K  +E  CPGVVSCAD+LVL+ R+ V+  GGP+ PL+TGR+D   +  +  E  LP  + ++SV+L+RF+  G +    V+L G+H IG THC    +RLY
Sbjct:   58 SIAEDIDRSYLHYDYYRESCPTAEKIIAKAIRDIYNVTPSVAPPIIRLLFHDCFIEGCDASVLLDADEAHTSEKDASPNLSLKGFDVIDAVKSELENVCPGVVSCADLLVLAAREAVLVAGGPFYPLETGRKDSAAAYRDFAEHELPAPDATLSVILQRFSFRGFNERETVSLFGAHSIGITHCTFFKNRLY 249          
BLAST of CB610579 vs. ExPASy Swiss-Prot
Match: PER56_ARATH (Peroxidase 56 OS=Arabidopsis thaliana GN=PER56 PE=2 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 1.443e-34
Identity = 76/183 (41.53%), Postives = 109/183 (59.56%), Query Frame = 3
Query:  147 GLVMNFYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDLTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHRIGRTHCVKLVHRLY 695
            GL + FY   CP+AE I+K+ V    K  +  A   LR  FHDC V+ C+ S+LL+L  K   EK    +  +R F  I+N+K A+E+ECPG+VSC+D+L L  RD +VAL GP   ++TGRRDG  +        LP   +++S ++ +F + G+D   LV L G H IG  HC ++ +RLY
Sbjct:   31 GLKVGFYDKACPKAELIVKKSVFEAVKNDRTIAAPLLRMFFHDCFVRGCEGSVLLELKNKK-DEKNSIPNLTLRGFEIIDNVKAALEKECPGIVSCSDVLALVARDAMVALNGPSWEVETGRRDGLVTNITEALLNLPSPFNNISSLITQFQSKGLDKKDLVVLSGGHTIGNGHCPQITNRLY 212          
BLAST of CB610579 vs. ExPASy Swiss-Prot
Match: PER11_ARATH (Peroxidase 11 OS=Arabidopsis thaliana GN=PER11 PE=1 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.221e-33
Identity = 66/187 (35.29%), Postives = 108/187 (57.75%), Query Frame = 3
Query:  138 EDPGLVMNFYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDLTRKTLSEKEMDRSFG-MRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHRIGRTHCVKLVHRLY 695
            +D  L +++YK TCP   D+IK++++ + K     A   +R  FHDC VQ CD S+LLD T     EK+   +   ++ ++ ++ IK  +E ECPGVVSCAD+L +  RD  + +GGPY  +  GR+D + +  E+    LP   + +  ++ +F + G+    +VAL+G+H IG+  C     R+Y
Sbjct:   26 KDLPLTLDYYKSTCPTVFDVIKKEMECIVKEDPRNAAIIIRLHFHDCFVQGCDGSVLLDETETLQGEKKASPNINSLKGYKIVDRIKNIIESECPGVVSCADLLTIGARDATILVGGPYWDVPVGRKDSKTASYELATTNLPTPEEGLISIIAKFYSQGLSVEDMVALIGAHTIGKAQCRNFRSRIY 212          
BLAST of CB610579 vs. ExPASy Swiss-Prot
Match: PER52_ARATH (Peroxidase 52 OS=Arabidopsis thaliana GN=PER52 PE=2 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 1.595e-33
Identity = 76/185 (41.08%), Postives = 99/185 (53.51%), Query Frame = 3
Query:  150 LVMNFYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDLTRKTLSEKEM-DRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHRIGRTHCVKLVHRLYPE 701
            L  NFY  +CP     ++  VK           S LR  FHDC V  CD S+LLD T     E+         R F  I+NIK AVE+ CPGVVSCADIL ++ RD VVALGGP   +K GRRD R +        +P    S+S ++  F+A+G+    +VAL G+H IG++ C     R+Y E
Sbjct:   30 LTTNFYSTSCPNLLSTVQTAVKSAVNSEARMGASILRLFFHDCFVNGCDGSILLDDTSSFTGEQNAAPNRNSARGFNVIDNIKSAVEKACPGVVSCADILAIAARDSVVALGGPNWNVKVGRRDARTASQAAANSNIPAPTSSLSQLISSFSAVGLSTRDMVALSGAHTIGQSRCTNFRARIYNE 214          
BLAST of CB610579 vs. ExPASy Swiss-Prot
Match: PER4_VITVI (Peroxidase 4 OS=Vitis vinifera GN=GSVIVT00023967001 PE=1 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 7.916e-33
Identity = 81/211 (38.39%), Postives = 109/211 (51.66%), Query Frame = 3
Query:   81 LALRSFSAVSLRS---ALAENEEDPGLVMNFYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDLTRKTLSEKE-MDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHRIGRTHCVKLVHRLYPE 701
            +A  SFS V +     AL        L  NFY  TCP+  D +K  V+    + +    S LR  FHDC V  CDAS+LLD T     E+  +     +R    I+NIK  VE  CPGVVSCADI+ ++ RD VV LGGP   +K GRRD + +        +P    S+S ++ +F A G+    +VAL G+H IG+  C     R+Y E
Sbjct:    1 MASSSFSIVVVALGVLALFAGSSSAQLSTNFYSKTCPKVFDTVKSGVQSAVSKERRMGASLLRLFFHDCFVNGCDASVLLDDTSSFTGEQTAVPNKNSIRGLNVIDNIKSQVESVCPGVVSCADIIAIAARDSVVILGGPDWDVKLGRRDSKTASLSGANNNIPPPTSSLSNLISKFQAQGLSTRDMVALSGAHTIGQARCTSFRARIYNE 211          
BLAST of CB610579 vs. ExPASy Swiss-Prot
Match: PER49_ARATH (Peroxidase 49 OS=Arabidopsis thaliana GN=PER49 PE=2 SV=2)

HSP 1 Score: 139.043 bits (349), Expect = 2.303e-32
Identity = 81/214 (37.85%), Postives = 110/214 (51.40%), Query Frame = 3
Query:   57 RTKAVFLLLALRSFSAVSLRSALAENEEDPGLVMNFYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDLTRKTLSEKEMD-RSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHRIGRTHCVKLVHRLY 695
            R  +  LLL+L  F  + L       +  PG    +Y  +CPQ  +I++  V     R    A S LR  FHDC VQ CD SLLLD + +  +EK  +  S   R F  ++ IK  +E++CPG VSCAD+L L+ RD  V  GGP   +  GRRD R +        +P  N++   +L +F   G+D   LVAL GSH IG + C     RLY
Sbjct:    3 RLTSFLLLLSLICFVPLCLCDKSYGGKLFPG----YYAHSCPQVNEIVRSVVAKAVARETRMAASLLRLHFHDCFVQGCDGSLLLDSSGRVATEKNSNPNSKSARGFDVVDQIKAELEKQCPGTVSCADVLTLAARDSSVLTGGPSWVVPLGRRDSRSASLSQSNNNIPAPNNTFQTILSKFNRQGLDITDLVALSGSHTIGFSRCTSFRQRLY 212          
BLAST of CB610579 vs. ExPASy Swiss-Prot
Match: PERP7_BRARA (Peroxidase P7 OS=Brassica rapa PE=1 SV=3)

HSP 1 Score: 138.658 bits (348), Expect = 3.008e-32
Identity = 75/185 (40.54%), Postives = 100/185 (54.05%), Query Frame = 3
Query:  150 LVMNFYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDLTRKTLSEKEMDRSFGM-RNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHRIGRTHCVKLVHRLYPE 701
            L  NFY  +CP     +K  VK           S LR  FHDC V  CD S+LLD T     E+    +    R F  I +IK AVE+ CPGVVSCADIL ++ RD VV LGGP   +K GRRD + +        +P  + S+S ++  F+A+G+    +VAL G+H IG++ CV    R+Y E
Sbjct:    2 LTTNFYSTSCPNLLSTVKSGVKSAVSSQPRMGASILRLFFHDCFVNGCDGSILLDDTSSFTGEQNAGPNRNSARGFTVINDIKSAVEKACPGVVSCADILAIAARDSVVQLGGPNWNVKVGRRDAKTASQAAANSNIPAPSMSLSQLISSFSAVGLSTRDMVALSGAHTIGQSRCVNFRARVYNE 186          
BLAST of CB610579 vs. ExPASy Swiss-Prot
Match: PER3_ARATH (Peroxidase 3 OS=Arabidopsis thaliana GN=PER3 PE=1 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 6.701e-32
Identity = 73/182 (40.11%), Postives = 107/182 (58.79%), Query Frame = 3
Query:  150 LVMNFYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDLTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHRIGRTHCVKLVHRLY 695
            L MNFY ++CP AE I+++ V        + A + +R  FHDC V+ CD S+L++ T    +E++   +  +R F +I+ IK  +E +CPG+VSCADI+ L+ RD VV  GGP   + TGRRDGR S A      +P    +++ +   FA  G+D   LV L G+H IG +HC    +RLY
Sbjct:   26 LQMNFYANSCPNAEKIVQDFVSNHVSNAPSLAAALIRMHFHDCFVRGCDGSVLINSTSGN-AERDATPNLTVRGFGFIDAIKSVLEAQCPGIVSCADIIALASRDAVVFTGGPNWSVPTGRRDGRISNAAEALANIPPPTSNITNLQTLFANQGLDLKDLVLLSGAHTIGVSHCSSFTNRLY 206          
The following BLAST results are available for this feature:
BLAST of CB610579 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 108
Match NameE-valueIdentityDescription
PER42_ARATH3.378e-9276.67Peroxidase 42 OS=Arabidopsis thaliana GN=PER42 PE=... [more]
PER21_ARATH1.808e-6160.22Peroxidase 21 OS=Arabidopsis thaliana GN=PER21 PE=... [more]
PER48_ARATH1.821e-3739.06Putative Peroxidase 48 OS=Arabidopsis thaliana GN=... [more]
PER56_ARATH1.443e-3441.53Peroxidase 56 OS=Arabidopsis thaliana GN=PER56 PE=... [more]
PER11_ARATH1.221e-3335.29Peroxidase 11 OS=Arabidopsis thaliana GN=PER11 PE=... [more]
PER52_ARATH1.595e-3341.08Peroxidase 52 OS=Arabidopsis thaliana GN=PER52 PE=... [more]
PER4_VITVI7.916e-3338.39Peroxidase 4 OS=Vitis vinifera GN=GSVIVT0002396700... [more]
PER49_ARATH2.303e-3237.85Peroxidase 49 OS=Arabidopsis thaliana GN=PER49 PE=... [more]
PERP7_BRARA3.008e-3240.54Peroxidase P7 OS=Brassica rapa PE=1 SV=3[more]
PER3_ARATH6.701e-3240.11Peroxidase 3 OS=Arabidopsis thaliana GN=PER3 PE=1 ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionALBEDO0003_IIaF_G08 Mature Albedo Citrus sinensis cDNA clone ALBEDO0003_IIaF_G08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB610579 ID=CB610579; Name=CB610579; organism=Citrus sinensis; type=EST; length=706bp
GGGGATCTAAACCAACGTTGGTCACCTTTAGTGAGTGAAGAGTAGAAGAG
AAAATNCGTACGAAAGCTGTCTTCTTGCTTTTAGCTTTGCGATCCTTCTC
AGCTGTGTCTCTGAGGTCTGCTTTGGCAGAAAATGAAGAGGACCCAGGTC
TTGTTATGAATTTTTACAAGGATACATGCCCTCAGGCCGAGGACATTATC
AAGGAACAAGTTAAGCTTCTGTACAAGCGCCACAAGAACACTGCATTTTC
TTGGCTTAGAAACATTTTCCATGACTGTGCTGTCCAGTCTTGTGATGCTT
CACTGCTTCTGGACTTGACAAGAAAGACCTTGTCTGAGAAGGAGATGGAC
AGGAGCTTTGGTATGAGGAACTTCAGGTACATTGAGAACATCAAAGAAGC
TGTTGAAAGAGAGTGCCCTGGTGTTGTTTCCTGTGCTGATATTCTTGTCC
TGTCCGGTAGAGATGGCGTTGTTGCGCTTGGAGGCCCTTACATTCCTCTC
AAGACAGGAAGAAGAGATGGTAGAAAAAGCAGAGCAGAGATACTTGAGCA
GTATCTCCCAGATCACAACGACAGCATGTCTGTTGTTCTTGAGAGGTTTG
CAGCCATTGGCATTGACGCCCCTGGACTTGTTGCTCTGCTAGGATCTCAC
AGGATCGGCAGAACTCATTGTGTGAAGCTGGTGCACCGTCTGTACCCAGA
AATTGA
back to top