CB610580
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB610580 vs. ExPASy Swiss-Prot
Match: FAD6E_ARATH (Omega-6 fatty acid desaturase, endoplasmic reticulum OS=Arabidopsis thaliana GN=FAD2 PE=2 SV=1) HSP 1 Score: 326.635 bits (836), Expect = 8.461e-89 Identity = 143/194 (73.71%), Postives = 164/194 (84.54%), Query Frame = 1 Query: 157 VPSTPMKVDSDPLKRVPCSKPPFTLSQVKKAIPPHCFERSVLRSFSYVVHDLTIAFVFYYIADTYIHQLPHPLSYLAWPVYWALQGCILIGVWVVAHECGHHAFSDYQWLDDTVGLILHSCLLVPYFSWKYSHRRHHSNTGSLDRDEVFVPKQKTAIGWYAKILNNPLGRVITLTVTLTLGWPLYLAFNVSGRP 738 VP++ K ++D KRVPC KPPF++ +KKAIPPHCF+RS+ RSFSY++ D+ IA FYY+A Y LP PLSYLAWP+YWA QGC+L G+WV+AHECGHHAFSDYQWLDDTVGLI HS LLVPYFSWKYSHRRHHSNTGSL+RDEVFVPKQK+AI WY K LNNPLGR++ LTV LGWPLYLAFNVSGRP Sbjct: 9 VPTSSKKSETDTTKRVPCEKPPFSVGDLKKAIPPHCFKRSIPRSFSYLISDIIIASCFYYVATNYFSLLPQPLSYLAWPLYWACQGCVLTGIWVIAHECGHHAFSDYQWLDDTVGLIFHSFLLVPYFSWKYSHRRHHSNTGSLERDEVFVPKQKSAIKWYGKYLNNPLGRIMMLTVQFVLGWPLYLAFNVSGRP 202
BLAST of CB610580 vs. ExPASy Swiss-Prot
Match: FD6E2_SOYBN (Omega-6 fatty acid desaturase, endoplasmic reticulum isozyme 2 OS=Glycine max GN=FAD2-2 PE=2 SV=1) HSP 1 Score: 323.939 bits (829), Expect = 5.484e-88 Identity = 150/194 (77.32%), Postives = 164/194 (84.54%), Query Frame = 1 Query: 157 VPSTPMKVDSDPLKRVPCSKPPFTLSQVKKAIPPHCFERSVLRSFSYVVHDLTIAFVFYYIADTYIHQLPHPLSYLAWPVYWALQGCILIGVWVVAHECGHHAFSDYQWLDDTVGLILHSCLLVPYFSWKYSHRRHHSNTGSLDRDEVFVPKQKTAIGWYAKILNNPLGRVITLTVTLTLGWPLYLAFNVSGRP 738 VP K + DPLKRVP KP F+LSQ+KKAIPPHCF+RSVLRSFSYVV+DLTIAF YY+A Y H LP PLS+ +YWA+QGCIL GVWV+AHECGHHAFSDYQ LDD VGLILHS LLVPYFSWKYSHRRHHSNTGSL+RDEVFVPKQK+ I WY+K LNNP GRV+TL VTLTLGWPLYLA NVSGRP Sbjct: 9 VPPANRKSEVDPLKRVPFEKPQFSLSQIKKAIPPHCFQRSVLRSFSYVVYDLTIAFCLYYVATHYFHLLPGPLSFRGMAIYWAVQGCILTGVWVIAHECGHHAFSDYQLLDDIVGLILHSALLVPYFSWKYSHRRHHSNTGSLERDEVFVPKQKSCIKWYSKYLNNPPGRVLTLAVTLTLGWPLYLALNVSGRP 202
BLAST of CB610580 vs. ExPASy Swiss-Prot
Match: FAD6E_BRAJU (Omega-6 fatty acid desaturase, endoplasmic reticulum OS=Brassica juncea PE=2 SV=1) HSP 1 Score: 322.398 bits (825), Expect = 1.596e-87 Identity = 142/194 (73.20%), Postives = 163/194 (84.02%), Query Frame = 1 Query: 157 VPSTPMKVDSDPLKRVPCSKPPFTLSQVKKAIPPHCFERSVLRSFSYVVHDLTIAFVFYYIADTYIHQLPHPLSYLAWPVYWALQGCILIGVWVVAHECGHHAFSDYQWLDDTVGLILHSCLLVPYFSWKYSHRRHHSNTGSLDRDEVFVPKQKTAIGWYAKILNNPLGRVITLTVTLTLGWPLYLAFNVSGRP 738 V +P K ++D LKRVPC PPFT+ ++KKAIPPHCF+RS+ RSFSY++ D+ +A FYY+A TY LPHPLSY+AWP+YWA QG +L GVWV+AHECGHHAFSDYQWLDDTVGLI HS LLVPYFSWKYSHRRHHSNTGSL+RDEVFVPK+K+ I WY K LNNPLGR + LTV TLGWPLY AFNVSGRP Sbjct: 9 VSPSPKKSETDTLKRVPCETPPFTVGELKKAIPPHCFKRSIPRSFSYLIWDIIVASCFYYVATTYFPLLPHPLSYVAWPLYWACQGVVLTGVWVIAHECGHHAFSDYQWLDDTVGLIFHSFLLVPYFSWKYSHRRHHSNTGSLERDEVFVPKKKSDIKWYGKYLNNPLGRTVMLTVQFTLGWPLYWAFNVSGRP 202
BLAST of CB610580 vs. ExPASy Swiss-Prot
Match: FD6E1_SOYBN (Omega-6 fatty acid desaturase, endoplasmic reticulum isozyme 1 OS=Glycine max GN=FAD2-1 PE=2 SV=1) HSP 1 Score: 311.612 bits (797), Expect = 2.817e-84 Identity = 137/183 (74.86%), Postives = 158/183 (86.34%), Query Frame = 1 Query: 190 PLKRVPCSKPPFTLSQVKKAIPPHCFERSVLRSFSYVVHDLTIAFVFYYIADTYIHQLPHPLSYLAWPVYWALQGCILIGVWVVAHECGHHAFSDYQWLDDTVGLILHSCLLVPYFSWKYSHRRHHSNTGSLDRDEVFVPKQKTAIGWYAKILNNPLGRVITLTVTLTLGWPLYLAFNVSGRP 738 PL RVP +KPPFT+ Q+KKAIPPHCF+RS+L SFSYVV+DL+ AF+FY IA TY H LP P S +AWP+YW LQGC+L GVWV+AHECGHHAFS YQW+DD VGL LHS LLVPYFSWK SHRRHHSNTGSLDRDEVFVPK K+ + W++K LNNPLGR ++L VTLT+GWP+YLAFNVSGRP Sbjct: 25 PLSRVPNTKPPFTVGQLKKAIPPHCFQRSLLTSFSYVVYDLSFAFIFY-IATTYFHLLPQPFSLIAWPIYWVLQGCLLTGVWVIAHECGHHAFSKYQWVDDVVGLTLHSTLLVPYFSWKISHRRHHSNTGSLDRDEVFVPKPKSKVAWFSKYLNNPLGRAVSLLVTLTIGWPMYLAFNVSGRP 206
BLAST of CB610580 vs. ExPASy Swiss-Prot
Match: FAD12_CREAL (Delta(12) fatty acid dehydrogenase OS=Crepis alpina PE=2 SV=2) HSP 1 Score: 263.077 bits (671), Expect = 1.149e-69 Identity = 113/187 (60.43%), Postives = 143/187 (76.47%), Query Frame = 1 Query: 175 KVDSDPLKRVPCSKPPFTLSQVKKAIPPHCFERSVLRSFSYVVHDLTIAFVFYYIADTYIHQLPHPLSYLAWPVYWALQGCILIGVWVVAHECGHHAFSDYQWLDDTVGLILHSCLLVPYFSWKYSHRRHHSNTGSLDRDEVFVPKQKTAIGWYAKILNNPLGRVITLTVTLTLGWPLYLAFNVSGR 735 + PL PPFT+S +K+AIPPHCF+RSV+RS Y+VHD IA++FY++AD YI LP PL+YLAWP+YW Q IL G+WV+ HECGHHAFSDYQW+DDTVG ILHS L+ PYFSWKYSHR HH+NT SLD DEV++PK K + Y K+LN+P GR++ + +T TLG+PLYL N+SG+ Sbjct: 8 RTSQKPLMERVSVDPPFTVSDLKQAIPPHCFKRSVIRSSYYIVHDAIIAYIFYFLADKYIPILPAPLAYLAWPLYWFCQASILTGLWVIGHECGHHAFSDYQWVDDTVGFILHSFLMTPYFSWKYSHRNHHANTNSLDNDEVYIPKSKAKVALYYKVLNHPPGRLLIMFITFTLGFPLYLFTNISGK 194
BLAST of CB610580 vs. ExPASy Swiss-Prot
Match: FAD12_MORIS (Delta(12) fatty acid desaturase OS=Mortierella isabellina PE=2 SV=1) HSP 1 Score: 165.622 bits (418), Expect = 2.496e-40 Identity = 81/190 (42.63%), Postives = 113/190 (59.47%), Query Frame = 1 Query: 217 PPFTLSQVKKAIPPHCFERSVLRSFSYVVHDLTIAFVFYYIADTYIHQLPHPL-SYLAWPVYWALQGCILIGVWVVAHECGHHAFSDYQWLDDTVGLILHSCLLVPYFSWKYSHRRHHSNTGSLDRDEVFVPKQKTAIGWYAKIL----------------NNPLGRVITLTVTLTLGWPLYLAFNVSGR 735 P FT+ ++++ IP HCFERS LR +V DLT A + + +A T I + +PL YLAWP YW +QG + G+WV+AHECGH +FS + L++TVG ILHS LLVPY SW+ SH +HH TG + +D+VFVPK ++ +G K P+ + + + GWP YL N SG+ Sbjct: 36 PEFTIKEIRECIPAHCFERSGLRGLCHVAIDLTWASLLF-LAATQIDKFENPLIRYLAWPAYWIMQGIVCTGIWVLAHECGHQSFSTSKTLNNTVGWILHSMLLVPYHSWRISHSKHHKATGHMTKDQVFVPKTRSQVGLPPKESAAAAVQEEDMSVHLDEEAPIVTLFWMVIQFLFGWPAYLIMNASGQ 224
BLAST of CB610580 vs. ExPASy Swiss-Prot
Match: FAD12_MORAP (Delta(12) fatty acid desaturase OS=Mortierella alpina PE=2 SV=2) HSP 1 Score: 165.236 bits (417), Expect = 3.260e-40 Identity = 81/190 (42.63%), Postives = 113/190 (59.47%), Query Frame = 1 Query: 217 PPFTLSQVKKAIPPHCFERSVLRSFSYVVHDLTIAFVFYYIADTYIHQLPHPL-SYLAWPVYWALQGCILIGVWVVAHECGHHAFSDYQWLDDTVGLILHSCLLVPYFSWKYSHRRHHSNTGSLDRDEVFVPKQKTAIGWYAK----------------ILNNPLGRVITLTVTLTLGWPLYLAFNVSGR 735 P FT+ ++++ IP HCFERS LR +V DLT A + + +A T I + +PL YLAWP YW +QG + G+WV+AHECGH +FS + L++TVG ILHS LLVPY SW+ SH +HH TG + +D+VFVPK ++ +G K P+ + + + GWP YL N SG+ Sbjct: 36 PEFTIKEIRECIPAHCFERSGLRGLCHVAIDLTWASLLF-LAATQIDKFENPLIRYLAWPAYWIMQGIVCTGIWVLAHECGHQSFSTSKTLNNTVGWILHSMLLVPYHSWRISHSKHHKATGHMTKDQVFVPKTRSQVGLPPKENAAAAVQEEDMSVHLDEEAPIVTLFWMVIQFLFGWPAYLIMNASGQ 224
BLAST of CB610580 vs. ExPASy Swiss-Prot
Match: FAD3E_ARATH (Omega-3 fatty acid desaturase, endoplasmic reticulum OS=Arabidopsis thaliana GN=FAD3 PE=2 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 6.585e-33 Identity = 74/178 (41.57%), Postives = 106/178 (59.55%), Query Frame = 1 Query: 205 PCSKPPFTLSQVKKAIPPHCFERSVLRSFSYVVHDLTIAFVFYYIADTYIHQLPHPLSYLAWPVYWALQGCILIGVWVVAHECGHHAFSDYQWLDDTVGLILHSCLLVPYFSWKYSHRRHHSNTGSLDRDEVFVPKQKTAIGWYAKILNNPLGRVITLTVTL-TLGWPLYLAFNVSGR 735 P ++PPF + ++ AIP HC+ +S LRS SYVV D+ IA IA Y+ S+ WP+YWA QG + ++V+ H+CGH +FSD L+ VG ILHS +LVPY W+ SHR HH N G ++ DE +VP + Y K+ ++ R++ TV L L +PLYL + G+ Sbjct: 28 PSAQPPFKIGDIRAAIPKHCWVKSPLRSMSYVVRDI-IAVAALAIAAVYVD------SWFLWPLYWAAQGTLFWAIFVLGHDCGHGSFSDIPLLNSVVGHILHSFILVPYHGWRISHRTHHQNHGHVENDESWVPLPERV---YKKLPHST--RMLRYTVPLPMLAYPLYLCYRSPGK 193
BLAST of CB610580 vs. ExPASy Swiss-Prot
Match: FAD3E_TOBAC (Omega-3 fatty acid desaturase, endoplasmic reticulum OS=Nicotiana tabacum GN=FAD3 PE=2 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 5.217e-30 Identity = 68/180 (37.78%), Postives = 102/180 (56.67%), Query Frame = 1 Query: 205 PCSKPPFTLSQVKKAIPPHCFERSVLRSFSYVVHDLTIAFVFYYIADTYIHQLPHPLSYLAWPVYWALQGCILIGVWVVAHECGHHAFSDYQWLDDTVGLILHSCLLVPYFSWKYSHRRHHSNTGSLDRDEVFVP---KQKTAIGWYAKILNNPLGRVITLTVTLTLGWPLYLAFNVSGR 735 P + PPF L++++ IP HC+ + LRS SYVV D+ IA H S+L +P+YWA+QG + ++V+ H+CGH +FSD Q L++ VG ILHS +LVPY W+ SH+ HH N G+++ DE +VP K +G+ K L + + L +P+YL G+ Sbjct: 24 PSAPPPFRLAEIRNVIPKHCWVKDPLRSLSYVVRDVIFVATLIGIAI-------HLDSWLFYPLYWAIQGTMFWAIFVLGHDCGHGSFSDSQLLNNVVGHILHSAILVPYHGWRISHKTHHQNHGNVETDESWVPMPEKLYNKVGYSTKFLRYKIPFPL-------LAYPMYLMKRSPGK 189
BLAST of CB610580 vs. ExPASy Swiss-Prot
Match: FAD3E_BRANA (Omega-3 fatty acid desaturase, endoplasmic reticulum OS=Brassica napus GN=FAD3 PE=2 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 1.518e-29 Identity = 68/178 (38.20%), Postives = 101/178 (56.74%), Query Frame = 1 Query: 205 PCSKPPFTLSQVKKAIPPHCFERSVLRSFSYVVHDLTIAFVFYYIADTYIHQLPHPLSYLAWPVYWALQGCILIGVWVVAHECGHHAFSDYQWLDDTVGLILHSCLLVPYFSWKYSHRRHHSNTGSLDRDEVFVPKQKTAIGWYAKILNNPLGRVITLTVTL-TLGWPLYLAFNVSGR 735 P ++PPF + ++ AIP HC+ +S LRS SYV D+ A +A Y S+ WP+YW QG + ++V+ H+CGH +FSD L+ VG ILHS +LVPY W+ SHR HH N G ++ DE +VP + Y + ++ R++ TV L L +P+YL + G+ Sbjct: 25 PSAQPPFKIGDIRAAIPKHCWVKSPLRSMSYVTRDI-FAVAALAMAAVYFD------SWFLWPLYWVAQGTLFWAIFVLGHDCGHGSFSDIPLLNSVVGHILHSFILVPYHGWRISHRTHHQNHGHVENDESWVPLPEKL---YKNLPHST--RMLRYTVPLPMLAYPIYLWYRSPGK 190 The following BLAST results are available for this feature:
BLAST of CB610580 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 24
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Sequences
The
following sequences are available for this feature:
EST sequence >CB610580 ID=CB610580; Name=CB610580; organism=Citrus sinensis; type=EST; length=738bpback to top |