CB610623
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB610623 vs. ExPASy Swiss-Prot
Match: SUI1_SPOST (Protein translation factor SUI1 homolog OS=Sporobolus stapfianus PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 2.206e-27 Identity = 58/64 (90.62%), Postives = 60/64 (93.75%), Query Frame = 3 Query: 3 VKXXFIYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAGIVKKEHIKMHGF 194 +K F YNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVS FLVQAGIVKKEHIK+HGF Sbjct: 52 LKKEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSNFLVQAGIVKKEHIKIHGF 115
BLAST of CB610623 vs. ExPASy Swiss-Prot
Match: SUI1_ORYSJ (Protein translation factor SUI1 homolog OS=Oryza sativa subsp. japonica GN=GOS2 PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 2.206e-27 Identity = 58/64 (90.62%), Postives = 60/64 (93.75%), Query Frame = 3 Query: 3 VKXXFIYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAGIVKKEHIKMHGF 194 +K F YNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVS FLVQAGIVKKEHIK+HGF Sbjct: 52 LKKEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSNFLVQAGIVKKEHIKIHGF 115
BLAST of CB610623 vs. ExPASy Swiss-Prot
Match: SUI1_ORYSI (Protein translation factor SUI1 homolog OS=Oryza sativa subsp. indica GN=GOS2 PE=2 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 2.206e-27 Identity = 58/64 (90.62%), Postives = 60/64 (93.75%), Query Frame = 3 Query: 3 VKXXFIYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAGIVKKEHIKMHGF 194 +K F YNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVS FLVQAGIVKKEHIK+HGF Sbjct: 52 LKKEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSNFLVQAGIVKKEHIKIHGF 115
BLAST of CB610623 vs. ExPASy Swiss-Prot
Match: SUI1_MAIZE (Protein translation factor SUI1 homolog OS=Zea mays GN=TIF PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 8.384e-27 Identity = 57/64 (89.06%), Postives = 60/64 (93.75%), Query Frame = 3 Query: 3 VKXXFIYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAGIVKKEHIKMHGF 194 +K F Y+KILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVS FLVQAGIVKKEHIK+HGF Sbjct: 52 LKKEFSYSKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSNFLVQAGIVKKEHIKIHGF 115
BLAST of CB610623 vs. ExPASy Swiss-Prot
Match: SUI1_SALBA (Protein translation factor SUI1 homolog OS=Salix bakko PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 2.439e-26 Identity = 56/64 (87.50%), Postives = 61/64 (95.31%), Query Frame = 3 Query: 3 VKXXFIYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAGIVKKEHIKMHGF 194 +K + YNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVS+FLVQAGIVKKE+IK+HGF Sbjct: 50 LKKDYSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSSFLVQAGIVKKENIKIHGF 113
BLAST of CB610623 vs. ExPASy Swiss-Prot
Match: SUI12_ARATH (Protein translation factor SUI1 homolog 2 OS=Arabidopsis thaliana GN=At1g54290 PE=2 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 1.025e-24 Identity = 53/64 (82.81%), Postives = 60/64 (93.75%), Query Frame = 3 Query: 3 VKXXFIYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAGIVKKEHIKMHGF 194 +K + Y+KILKDLKKEFCCNGTVVQD ELGQVIQLQGDQRKNVSTFLVQAG+VKK++IK+HGF Sbjct: 50 LKKEYSYSKILKDLKKEFCCNGTVVQDSELGQVIQLQGDQRKNVSTFLVQAGLVKKDNIKIHGF 113
BLAST of CB610623 vs. ExPASy Swiss-Prot
Match: SUI11_ARATH (Protein translation factor SUI1 homolog 1 OS=Arabidopsis thaliana GN=At4g27130 PE=2 SV=2) HSP 1 Score: 112.464 bits (280), Expect = 1.339e-24 Identity = 53/64 (82.81%), Postives = 59/64 (92.19%), Query Frame = 3 Query: 3 VKXXFIYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAGIVKKEHIKMHGF 194 +K + Y KILKDLKKEFCCNGTVVQD ELGQVIQLQGDQRKNVSTFLVQAG+VKK++IK+HGF Sbjct: 50 LKKEYSYTKILKDLKKEFCCNGTVVQDSELGQVIQLQGDQRKNVSTFLVQAGLVKKDNIKIHGF 113
BLAST of CB610623 vs. ExPASy Swiss-Prot
Match: SUI1_BRAOL (Protein translation factor SUI1 homolog OS=Brassica oleracea PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 6.643e-24 Identity = 52/64 (81.25%), Postives = 58/64 (90.62%), Query Frame = 3 Query: 3 VKXXFIYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAGIVKKEHIKMHGF 194 +K + Y KILKDLKKEFCCNGTVVQD ELGQVIQLQGDQRKNVSTFLVQAG+VKK+ I++HGF Sbjct: 50 LKKEYSYTKILKDLKKEFCCNGTVVQDSELGQVIQLQGDQRKNVSTFLVQAGLVKKDDIQIHGF 113
BLAST of CB610623 vs. ExPASy Swiss-Prot
Match: SUI1_PIMBR (Protein translation factor SUI1 homolog OS=Pimpinella brachycarpa PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 4.030e-21 Identity = 48/64 (75.00%), Postives = 54/64 (84.38%), Query Frame = 3 Query: 3 VKXXFIYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAGIVKKEHIKMHGF 194 +K Y+KILKDLKK CCNGTVV D ELG+VIQLQGDQRKNVSTF+VQAGIVKK+ IK+H F Sbjct: 50 LKKELSYDKILKDLKKALCCNGTVVNDKELGKVIQLQGDQRKNVSTFIVQAGIVKKDQIKVHNF 113
BLAST of CB610623 vs. ExPASy Swiss-Prot
Match: EIF1B_PIG (Eukaryotic translation initiation factor 1b OS=Sus scrofa GN=EIF1B PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.136e-15 Identity = 35/56 (62.50%), Postives = 47/56 (83.93%), Query Frame = 3 Query: 27 KILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAGIVKKEHIKMHGF 194 K++K KK+F CNGTV++ PE G+VIQLQGDQRKN+ FL++ GIVK+E +K+HGF Sbjct: 58 KLVKAFKKKFACNGTVIEHPEYGEVIQLQGDQRKNICQFLLEVGIVKEEQLKVHGF 113 The following BLAST results are available for this feature:
BLAST of CB610623 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 23
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Sequences
The
following sequences are available for this feature:
EST sequence >CB610623 ID=CB610623; Name=CB610623; organism=Citrus sinensis; type=EST; length=538bpback to top |