CB610647

Overview
NameCB610647
Unique NameCB610647
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length604
Libraries
Library NameType
Mature Albedocdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB610647 vs. ExPASy Swiss-Prot
Match: TBL1X_MOUSE (F-box-like/WD repeat-containing protein TBL1X OS=Mus musculus GN=Tbl1x PE=2 SV=2)

HSP 1 Score: 93.5893 bits (231), Expect = 8.323e-19
Identity = 48/101 (47.52%), Postives = 65/101 (64.36%), Query Frame = 1
Query:  145 SITSEELNYLVFRYLQESGLLHSAFVLGYEAGINKCNIDGNLVPPRALITFVQKGLQYLEMEANLTCQSDVDMDEDFSFLQPMDLITKDVCELRQMVKEKK 447
            SITS+E+N+LV+RYLQESG  HSAF  G E+ I++ NI+G LVPP ALI+ +QKGLQY+E E ++     V        L  +D +  DV + RQ    +K
Sbjct:    2 SITSDEVNFLVYRYLQESGFSHSAFTFGIESHISQSNINGTLVPPAALISILQKGLQYVEAEISINEDGTVFDGRPIESLSLIDAVMPDVVQTRQQAFREK 102          
BLAST of CB610647 vs. ExPASy Swiss-Prot
Match: TBL1X_HUMAN (F-box-like/WD repeat-containing protein TBL1X OS=Homo sapiens GN=TBL1X PE=1 SV=3)

HSP 1 Score: 93.5893 bits (231), Expect = 8.323e-19
Identity = 48/101 (47.52%), Postives = 65/101 (64.36%), Query Frame = 1
Query:  145 SITSEELNYLVFRYLQESGLLHSAFVLGYEAGINKCNIDGNLVPPRALITFVQKGLQYLEMEANLTCQSDVDMDEDFSFLQPMDLITKDVCELRQMVKEKK 447
            SITS+E+N+LV+RYLQESG  HSAF  G E+ I++ NI+G LVPP ALI+ +QKGLQY+E E ++     V        L  +D +  DV + RQ    +K
Sbjct:   53 SITSDEVNFLVYRYLQESGFSHSAFTFGIESHISQSNINGTLVPPAALISILQKGLQYVEAEISINEDGTVFDGRPIESLSLIDAVMPDVVQTRQQAFREK 153          
BLAST of CB610647 vs. ExPASy Swiss-Prot
Match: TBL1X_MACFA (F-box-like/WD repeat-containing protein TBL1X OS=Macaca fascicularis GN=TBL1X PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.087e-18
Identity = 48/101 (47.52%), Postives = 65/101 (64.36%), Query Frame = 1
Query:  145 SITSEELNYLVFRYLQESGLLHSAFVLGYEAGINKCNIDGNLVPPRALITFVQKGLQYLEMEANLTCQSDVDMDEDFSFLQPMDLITKDVCELRQMVKEKK 447
            SITS+E+N+LV+RYLQESG  HSAF  G E+ I++ NI+G LVPP ALI+ +QKGLQY+E E ++     V        L  +D +  DV + RQ    +K
Sbjct:   53 SITSDEVNFLVYRYLQESGFSHSAFTFGIESHISQSNINGTLVPPAALISILQKGLQYVEAEISINEDGTVFDGRPIESLSLIDAVMPDVVQTRQRAFREK 153          
BLAST of CB610647 vs. ExPASy Swiss-Prot
Match: TBL1Y_HUMAN (F-box-like/WD repeat-containing protein TBL1Y OS=Homo sapiens GN=TBL1Y PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 4.131e-18
Identity = 47/101 (46.53%), Postives = 65/101 (64.36%), Query Frame = 1
Query:  145 SITSEELNYLVFRYLQESGLLHSAFVLGYEAGINKCNIDGNLVPPRALITFVQKGLQYLEMEANLTCQSDVDMDEDFSFLQPMDLITKDVCELRQMVKEKK 447
            SITS+E+N+LV+RYLQESG  HSAF  G E+ I++ NI+G LVPP ALI+ +QKGLQY+E E ++     V        L  +  +  DV ++RQ    +K
Sbjct:    2 SITSDEVNFLVYRYLQESGFSHSAFTFGIESHISQSNINGTLVPPSALISILQKGLQYVEAEISINKDGTVFDSRPIESLSLIVAVIPDVVQMRQQAFGEK 102          
BLAST of CB610647 vs. ExPASy Swiss-Prot
Match: TBL1R_MOUSE (F-box-like/WD repeat-containing protein TBL1XR1 OS=Mus musculus GN=Tbl1xr1 PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 5.395e-18
Identity = 46/101 (45.54%), Postives = 64/101 (63.37%), Query Frame = 1
Query:  145 SITSEELNYLVFRYLQESGLLHSAFVLGYEAGINKCNIDGNLVPPRALITFVQKGLQYLEMEANLTCQSDVDMDEDFSFLQPMDLITKDVCELRQMVKEKK 447
            SI+S+E+N+LV+RYLQESG  HSAF  G E+ I++ NI+G LVPP ALI+ +QKGLQY+E E ++     +        L  +D +  DV + RQ     K
Sbjct:    2 SISSDEVNFLVYRYLQESGFSHSAFTFGIESHISQSNINGALVPPAALISIIQKGLQYVEAEVSINEDGTLFDGRPIESLSLIDAVMPDVVQTRQQAYRDK 102          
BLAST of CB610647 vs. ExPASy Swiss-Prot
Match: TBL1R_HUMAN (F-box-like/WD repeat-containing protein TBL1XR1 OS=Homo sapiens GN=TBL1XR1 PE=1 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 5.395e-18
Identity = 46/101 (45.54%), Postives = 64/101 (63.37%), Query Frame = 1
Query:  145 SITSEELNYLVFRYLQESGLLHSAFVLGYEAGINKCNIDGNLVPPRALITFVQKGLQYLEMEANLTCQSDVDMDEDFSFLQPMDLITKDVCELRQMVKEKK 447
            SI+S+E+N+LV+RYLQESG  HSAF  G E+ I++ NI+G LVPP ALI+ +QKGLQY+E E ++     +        L  +D +  DV + RQ     K
Sbjct:    2 SISSDEVNFLVYRYLQESGFSHSAFTFGIESHISQSNINGALVPPAALISIIQKGLQYVEAEVSINEDGTLFDGRPIESLSLIDAVMPDVVQTRQQAYRDK 102          
BLAST of CB610647 vs. ExPASy Swiss-Prot
Match: TB1RB_XENLA (F-box-like/WD repeat-containing protein TBL1XR1-B OS=Xenopus laevis GN=tbl1xr1-B PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 5.395e-18
Identity = 46/101 (45.54%), Postives = 64/101 (63.37%), Query Frame = 1
Query:  145 SITSEELNYLVFRYLQESGLLHSAFVLGYEAGINKCNIDGNLVPPRALITFVQKGLQYLEMEANLTCQSDVDMDEDFSFLQPMDLITKDVCELRQMVKEKK 447
            SI+S+E+N+LV+RYLQESG  HSAF  G E+ I++ NI+G LVPP ALI+ +QKGLQY+E E ++     +        L  +D +  DV + RQ     K
Sbjct:    2 SISSDEVNFLVYRYLQESGFSHSAFTFGIESHISQSNINGALVPPAALISIIQKGLQYVEAEVSINEDGTLFDGRPIESLSLIDAVMPDVVQTRQQAYRDK 102          
BLAST of CB610647 vs. ExPASy Swiss-Prot
Match: TB1RA_XENLA (F-box-like/WD repeat-containing protein TBL1XR1-A OS=Xenopus laevis GN=tbl1xr1-A PE=1 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 1.570e-17
Identity = 45/101 (44.55%), Postives = 63/101 (62.38%), Query Frame = 1
Query:  145 SITSEELNYLVFRYLQESGLLHSAFVLGYEAGINKCNIDGNLVPPRALITFVQKGLQYLEMEANLTCQSDVDMDEDFSFLQPMDLITKDVCELRQMVKEKK 447
            SI+S+E+N+LV+RYLQESG  HSAF  G E+ I++ NI+G L PP ALI+ +QKGLQY+E E ++     +        L  +D +  DV + RQ     K
Sbjct:    2 SISSDEVNFLVYRYLQESGFSHSAFTFGIESHISQSNINGALAPPAALISIIQKGLQYVEAEVSINEDGTLFDGRPIESLSLIDAVMPDVVQTRQQAYRDK 102          
BLAST of CB610647 vs. ExPASy Swiss-Prot
Match: EBI_DROME (F-box-like/WD repeat-containing protein ebi OS=Drosophila melanogaster GN=ebi PE=1 SV=2)

HSP 1 Score: 85.5001 bits (210), Expect = 2.267e-16
Identity = 45/98 (45.92%), Postives = 67/98 (68.37%), Query Frame = 1
Query:  145 SITSEELNYLVFRYLQESGLLHSAFVLGYEAGINKCNIDGNLVPPRALITFVQKGLQYLEMEANLTCQSDVDMDEDFSFLQPMDLITKDVCELRQMVK 438
            S +S+E+N+LV+RYLQESG LHSA+V G E+ I++ NI+G LVPP AL+T +QKGL Y E+E ++    D ++      L  +D +  +V  L+ +VK
Sbjct:    2 SFSSDEVNFLVYRYLQESGFLHSAYVFGIESHISQSNINGALVPPAALLTILQKGLLYTEVEWSV--GEDGEVARPIEGLSLIDAVMPEVKPLKPIVK 97          
The following BLAST results are available for this feature:
BLAST of CB610647 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 9
Match NameE-valueIdentityDescription
TBL1X_MOUSE8.323e-1947.52F-box-like/WD repeat-containing protein TBL1X OS=M... [more]
TBL1X_HUMAN8.323e-1947.52F-box-like/WD repeat-containing protein TBL1X OS=H... [more]
TBL1X_MACFA1.087e-1847.52F-box-like/WD repeat-containing protein TBL1X OS=M... [more]
TBL1Y_HUMAN4.131e-1846.53F-box-like/WD repeat-containing protein TBL1Y OS=H... [more]
TBL1R_MOUSE5.395e-1845.54F-box-like/WD repeat-containing protein TBL1XR1 OS... [more]
TBL1R_HUMAN5.395e-1845.54F-box-like/WD repeat-containing protein TBL1XR1 OS... [more]
TB1RB_XENLA5.395e-1845.54F-box-like/WD repeat-containing protein TBL1XR1-B ... [more]
TB1RA_XENLA1.570e-1744.55F-box-like/WD repeat-containing protein TBL1XR1-A ... [more]
EBI_DROME2.267e-1645.92F-box-like/WD repeat-containing protein ebi OS=Dro... [more]
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Properties
Property NameValue
Genbank descriptionALBEDO0003_IIIaF_G10 Mature Albedo Citrus sinensis cDNA clone ALBEDO0003_IIIaF_G10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB610647 ID=CB610647; Name=CB610647; organism=Citrus sinensis; type=EST; length=604bp
GGGGACAGAGAGAAACATAAAAAAGCAAAAAAAGAAAAACGAAAATCTCT
TGATCTCCTGTTACTGTTGCTGGAGCTTGACCGCATGATTTTTTGACCGT
TTATCCCAGCCATTGATTCGGACGAATTTCGTGCAACGATGAGTTCTATC
ACTTCTGAAGAGTTGAATTACCTAGTCTTCCGCTACTTGCAGGAATCAGG
GTTACTACACTCGGCTTTTGTTTTAGGATATGAGGCTGGTATCAACAAAT
GCAATATTGATGGCAATTTGGTTCCACCTCGTGCTCTGATTACATTTGTA
CAAAAGGGGCTTCAATACTTGGAGATGGAAGCAAATTTGACTTGCCAGAG
TGATGTAGACATGGATGAAGACTTCTCATTCTTACAACCTATGGATCTCA
TAACAAAGGATGTCTGTGAACTGCGACAAATGGTGAAAGAAAAAAAGAAA
AATCTAAATGGTGACAGAGATAAAGAGATTGATGTTGACAGGGGACATGA
AATAGAACATGGGCGGGTAAAAGAGAAGGAAAGACTTGATAGAGAGAAGG
AACGTGAAAGGGATAAAGAGAGGGCAAAAAAAAAAAAAAAAAAAAAAAAA
AAAA
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