CB610650

Overview
NameCB610650
Unique NameCB610650
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length407
Libraries
Library NameType
Mature Albedocdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2579 contig Csv1_Contig2579:405..811. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB610650 vs. ExPASy Swiss-Prot
Match: MT3_CARPA (Metallothionein-like protein type 3 OS=Carica papaya PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 1.734e-23
Identity = 46/66 (69.70%), Postives = 54/66 (81.82%), Query Frame = 3
Query:   90 MSDTCGNCDCADRSQCVKKGSSYAADFVETDLSFVSTVVVMDVQAAETVGNCKCGPTCACVNCTCG 287
            MSDTCGNCDCAD++QCVKKGSSY AD +ET+ S ++  VVMD  AAE  G CKCGP+C+C NCTCG
Sbjct:    1 MSDTCGNCDCADKTQCVKKGSSYTADIIETEKSIMT--VVMDAPAAENDGKCKCGPSCSCTNCTCG 64          
BLAST of CB610650 vs. ExPASy Swiss-Prot
Match: MT3_ACTDE (Metallothionein-like protein type 3 OS=Actinidia deliciosa GN=pKIWI503 PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 5.773e-19
Identity = 44/65 (67.69%), Postives = 49/65 (75.38%), Query Frame = 3
Query:   90 MSDTCGNCDCADRSQCVKKGSSYAADFVETDLSFVSTVVVMDVQAAETVGNCKCGPTCACVNCTC 284
            MSD CGNCDCAD SQCVKKG+S   D VETD S++   VVM V AAE+ G CKCG +C CVNCTC
Sbjct:    1 MSDKCGNCDCADSSQCVKKGNS--IDIVETDKSYIED-VVMGVPAAESGGKCKCGTSCPCVNCTC 62          
BLAST of CB610650 vs. ExPASy Swiss-Prot
Match: MT3_MUSAC (Metallothionein-like protein type 3 OS=Musa acuminata PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 1.286e-18
Identity = 39/64 (60.94%), Postives = 47/64 (73.44%), Query Frame = 3
Query:   99 TCGNCDCADRSQCVKKGSSYAADFVETDLSFVSTVVVMDVQAAETVGNCKCGPTCACVNCTCGS 290
            TCGNCDC D+SQCVKKG+SY  D VET+ S+V  V+V   +AAE  G CKCG  CAC +C CG+
Sbjct:    3 TCGNCDCVDKSQCVKKGNSYGIDIVETEKSYVDEVIVA-AEAAEHDGKCKCGAACACTDCKCGN 65          
BLAST of CB610650 vs. ExPASy Swiss-Prot
Match: MT3_PRUAV (Metallothionein-like protein 1 OS=Prunus avium GN=MT1 PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 9.217e-17
Identity = 38/65 (58.46%), Postives = 45/65 (69.23%), Query Frame = 3
Query:   90 MSDTCGNCDCADRSQCVKKGSSYAADFVETDLSFVSTVVVMDVQAAETVGNCKCGPTCACVNCTC 284
            MS  C NCDC+D SQC KKG S+    VET+   + TV+ MD  AAE  GNCKCGP+CACV+C C
Sbjct:    1 MSSKCSNCDCSDSSQCTKKGYSFDLVIVETENRSMDTVI-MDAPAAENGGNCKCGPSCACVDCKC 64          
BLAST of CB610650 vs. ExPASy Swiss-Prot
Match: MT3_MALDO (Metallothionein-like protein type 3 OS=Malus domestica GN=MT2 PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 4.575e-16
Identity = 39/66 (59.09%), Postives = 45/66 (68.18%), Query Frame = 3
Query:   90 MSDTCGNCDCADRSQCVKKGSSYAADFVETDLSFVSTVVVMDVQAAETVGNCKCGPTCACVNCTCG 287
            MS  C NCDCAD +QCVKKG+SY    VET+   + TV V D  AAE  G CKCG  C+CV+CTCG
Sbjct:    1 MSGKCDNCDCADSTQCVKKGNSYDLVIVETENRSMDTVFV-DAPAAEHDGKCKCGTGCSCVSCTCG 65          
BLAST of CB610650 vs. ExPASy Swiss-Prot
Match: MT3A_ORYSJ (Metallothionein-like protein 3A OS=Oryza sativa subsp. japonica GN=MT3A PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 1.019e-15
Identity = 36/66 (54.55%), Postives = 43/66 (65.15%), Query Frame = 3
Query:   90 MSDTCGNCDCADRSQCVKKGSSYAADFVETDLSFVSTVVVMDVQAAETVGNCKCGPTCACVNCTCG 287
            MSD CGNCDCAD+SQCVKKG+SY    VE + S        +V A E  G CKCG +C+C +C CG
Sbjct:    1 MSDKCGNCDCADKSQCVKKGTSYGVVIVEAEKSHFE-----EVAAGEENGGCKCGTSCSCTDCKCG 61          
BLAST of CB610650 vs. ExPASy Swiss-Prot
Match: MT3A_ORYSI (Metallothionein-like protein 3A OS=Oryza sativa subsp. indica GN=MT3A PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 1.019e-15
Identity = 36/66 (54.55%), Postives = 43/66 (65.15%), Query Frame = 3
Query:   90 MSDTCGNCDCADRSQCVKKGSSYAADFVETDLSFVSTVVVMDVQAAETVGNCKCGPTCACVNCTCG 287
            MSD CGNCDCAD+SQCVKKG+SY    VE + S        +V A E  G CKCG +C+C +C CG
Sbjct:    1 MSDKCGNCDCADKSQCVKKGTSYGVVIVEAEKSHFE-----EVAAGEENGGCKCGTSCSCTDCKCG 61          
BLAST of CB610650 vs. ExPASy Swiss-Prot
Match: MT3B_ORYSJ (Metallothionein-like protein 3B OS=Oryza sativa subsp. japonica GN=MT3B PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 1.627e-13
Identity = 33/66 (50.00%), Postives = 40/66 (60.61%), Query Frame = 3
Query:   90 MSDTCGNCDCADRSQCVKKGSSYAADFVETDLSFVSTVVVMDVQAAETVGNCKCGPTCACVNCTCG 287
            MSD CGNCDCAD+SQCVKKG+SY    V+ + S     +  +V   E  G CKC   C+C  C CG
Sbjct:    1 MSDKCGNCDCADKSQCVKKGTSYGVVIVDAEKSHFE--MAEEVGYEENDGKCKCTTGCSCAGCNCG 64          
BLAST of CB610650 vs. ExPASy Swiss-Prot
Match: MT3B_ORYSI (Metallothionein-like protein 3B OS=Oryza sativa subsp. indica GN=MT3B PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 6.183e-13
Identity = 32/66 (48.48%), Postives = 40/66 (60.61%), Query Frame = 3
Query:   90 MSDTCGNCDCADRSQCVKKGSSYAADFVETDLSFVSTVVVMDVQAAETVGNCKCGPTCACVNCTCG 287
            MSD CG+CDCAD+SQCVKKG+SY    V+ + S     +  +V   E  G CKC   C+C  C CG
Sbjct:    1 MSDKCGHCDCADKSQCVKKGTSYGVVIVDAEKSHFE--MAEEVGYEENDGKCKCTTGCSCAGCNCG 64          
The following BLAST results are available for this feature:
BLAST of CB610650 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 9
Match NameE-valueIdentityDescription
MT3_CARPA1.734e-2369.70Metallothionein-like protein type 3 OS=Carica papa... [more]
MT3_ACTDE5.773e-1967.69Metallothionein-like protein type 3 OS=Actinidia d... [more]
MT3_MUSAC1.286e-1860.94Metallothionein-like protein type 3 OS=Musa acumin... [more]
MT3_PRUAV9.217e-1758.46Metallothionein-like protein 1 OS=Prunus avium GN=... [more]
MT3_MALDO4.575e-1659.09Metallothionein-like protein type 3 OS=Malus domes... [more]
MT3A_ORYSJ1.019e-1554.55Metallothionein-like protein 3A OS=Oryza sativa su... [more]
MT3A_ORYSI1.019e-1554.55Metallothionein-like protein 3A OS=Oryza sativa su... [more]
MT3B_ORYSJ1.627e-1350.00Metallothionein-like protein 3B OS=Oryza sativa su... [more]
MT3B_ORYSI6.183e-1348.48Metallothionein-like protein 3B OS=Oryza sativa su... [more]
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Properties
Property NameValue
Genbank descriptionALBEDO0003_IIIaF_H02 Mature Albedo Citrus sinensis cDNA clone ALBEDO0003_IIIaF_H02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB610650 ID=CB610650; Name=CB610650; organism=Citrus sinensis; type=EST; length=407bp
GCGGGGATCACAGATAAGCAATGCAAGTTTCGTACAATAAAGAGCCCTCT
ATTTCCAGTTTTAAGTTCTAAGTTCTAAGCTCAATCAACATGTCGGACAC
CTGCGGCAACTGCGACTGCGCTGACAGGAGCCAGTGTGTGAAGAAGGGAA
GCAGCTATGCTGCTGACTTCGTCGAGACTGACTTGAGCTTTGTCAGCACC
GTTGTTGTCATGGACGTTCAGGCTGCTGAGACTGTAGGTAACTGCAAGTG
CGGCCCCACCTGCGCTTGCGTGAACTGCACTTGTGGTAGTCACTAATAAG
CAAACACATGCAGCAAAAAATAAGAAGCTGCAAGTGTGCCTAAATATTGT
GGGGGTTAAGAATAATGTAAGGGTGATCAAAAAAAAAAAAAAAAAAAAAA
AAAAAAA
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