CB610651

Overview
NameCB610651
Unique NameCB610651
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length164
Libraries
Library NameType
Mature Albedocdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13411 contig Csv1_Contig13411:623..786. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB610651 vs. ExPASy Swiss-Prot
Match: IPYR_SOLTU (Soluble inorganic pyrophosphatase OS=Solanum tuberosum GN=PPA PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 1.974e-19
Identity = 42/44 (95.45%), Postives = 43/44 (97.73%), Query Frame = 1
Query:    4 IDQGEKDDKIIAVCADDPEYRHYNDIKELPPHRLAEIRRFFEDY 135
            IDQGEKDDKIIAVCADDPEYRHY DIK+LPPHRLAEIRRFFEDY
Sbjct:  128 IDQGEKDDKIIAVCADDPEYRHYTDIKQLPPHRLAEIRRFFEDY 171          
BLAST of CB610651 vs. ExPASy Swiss-Prot
Match: IPYR2_ARATH (Soluble inorganic pyrophosphatase 2 OS=Arabidopsis thaliana GN=PPA2 PE=2 SV=2)

HSP 1 Score: 93.9745 bits (232), Expect = 2.579e-19
Identity = 42/44 (95.45%), Postives = 43/44 (97.73%), Query Frame = 1
Query:    4 IDQGEKDDKIIAVCADDPEYRHYNDIKELPPHRLAEIRRFFEDY 135
            IDQGEKDDKIIAVCADDPE+RHY DIKELPPHRLAEIRRFFEDY
Sbjct:  135 IDQGEKDDKIIAVCADDPEFRHYRDIKELPPHRLAEIRRFFEDY 178          
BLAST of CB610651 vs. ExPASy Swiss-Prot
Match: IPYR_ORYSJ (Soluble inorganic pyrophosphatase OS=Oryza sativa subsp. japonica GN=IPP PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 1.671e-18
Identity = 40/44 (90.91%), Postives = 42/44 (95.45%), Query Frame = 1
Query:    4 IDQGEKDDKIIAVCADDPEYRHYNDIKELPPHRLAEIRRFFEDY 135
            IDQGEKDDKIIAVCADDPEYRH+ DIKE+PPHRL EIRRFFEDY
Sbjct:  131 IDQGEKDDKIIAVCADDPEYRHFRDIKEIPPHRLQEIRRFFEDY 174          
BLAST of CB610651 vs. ExPASy Swiss-Prot
Match: IPYR_ORYSI (Soluble inorganic pyrophosphatase OS=Oryza sativa subsp. indica GN=IPP PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 1.671e-18
Identity = 40/44 (90.91%), Postives = 42/44 (95.45%), Query Frame = 1
Query:    4 IDQGEKDDKIIAVCADDPEYRHYNDIKELPPHRLAEIRRFFEDY 135
            IDQGEKDDKIIAVCADDPEYRH+ DIKE+PPHRL EIRRFFEDY
Sbjct:  131 IDQGEKDDKIIAVCADDPEYRHFRDIKEIPPHRLQEIRRFFEDY 174          
BLAST of CB610651 vs. ExPASy Swiss-Prot
Match: IPYR_MAIZE (Soluble inorganic pyrophosphatase OS=Zea mays GN=IPP PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 4.863e-18
Identity = 40/44 (90.91%), Postives = 41/44 (93.18%), Query Frame = 1
Query:    4 IDQGEKDDKIIAVCADDPEYRHYNDIKELPPHRLAEIRRFFEDY 135
            IDQGEKDDKIIAVCADDPEYRHYNDI EL PHRL EI+RFFEDY
Sbjct:  131 IDQGEKDDKIIAVCADDPEYRHYNDISELSPHRLQEIKRFFEDY 174          
BLAST of CB610651 vs. ExPASy Swiss-Prot
Match: IPYR2_CHLRE (Soluble inorganic pyrophosphatase 2 OS=Chlamydomonas reinhardtii GN=ppa2 PE=1 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 2.497e-14
Identity = 33/44 (75.00%), Postives = 40/44 (90.91%), Query Frame = 1
Query:    4 IDQGEKDDKIIAVCADDPEYRHYNDIKELPPHRLAEIRRFFEDY 135
            +DQGE+DDK+IAV ADDPEY+ + DI +LPPHRLAEI+RFFEDY
Sbjct:  105 LDQGERDDKLIAVHADDPEYKGFTDISQLPPHRLAEIKRFFEDY 148          
The following BLAST results are available for this feature:
BLAST of CB610651 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
IPYR_SOLTU1.974e-1995.45Soluble inorganic pyrophosphatase OS=Solanum tuber... [more]
IPYR2_ARATH2.579e-1995.45Soluble inorganic pyrophosphatase 2 OS=Arabidopsis... [more]
IPYR_ORYSJ1.671e-1890.91Soluble inorganic pyrophosphatase OS=Oryza sativa ... [more]
IPYR_ORYSI1.671e-1890.91Soluble inorganic pyrophosphatase OS=Oryza sativa ... [more]
IPYR_MAIZE4.863e-1890.91Soluble inorganic pyrophosphatase OS=Zea mays GN=I... [more]
IPYR2_CHLRE2.497e-1475.00Soluble inorganic pyrophosphatase 2 OS=Chlamydomon... [more]
back to top
Properties
Property NameValue
Genbank descriptionALBEDO0003_IIIaF_H05 Mature Albedo Citrus sinensis cDNA clone ALBEDO0003_IIIaF_H05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB610651 ID=CB610651; Name=CB610651; organism=Citrus sinensis; type=EST; length=164bp
GGGATTGATCAGGGTGAGAAAGATGATAAGATCATTGCTGTCTGTGCTGA
TGATCCCGAGTACCGACACTACAATGACATTAAGGAGCTTCCACCACATC
GTTTGGCTGAGATCCGCCGCTTCTTTGAAGACTACAAAAAAAAAAAAAAA
AAAAAAAAAAAAAA
back to top