CB610667

Overview
NameCB610667
Unique NameCB610667
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length387
Libraries
Library NameType
Mature Albedocdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6745 contig Csv1_Contig6745:640..1026. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB610667 vs. ExPASy Swiss-Prot
Match: UBL5_ARATH (Ubiquitin-like protein 5 OS=Arabidopsis thaliana GN=UBL5 PE=1 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 3.467e-32
Identity = 65/73 (89.04%), Postives = 70/73 (95.89%), Query Frame = 3
Query:   57 IIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAHTGTRADKIRILKWHNIYKDHITLKDYEIPDGMGLELYYS 275
            +IEVVLNDRLGKKVRVKCN+DDTIGDLKKLVAA TGTRA+KIRI KW+NIYKDHITLKDYEI DGMGLELYY+
Sbjct:    1 MIEVVLNDRLGKKVRVKCNDDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYN 73          
BLAST of CB610667 vs. ExPASy Swiss-Prot
Match: UBL5_PSAOB (Ubiquitin-like protein 5 OS=Psammomys obesus GN=UBL5 PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 1.080e-25
Identity = 54/72 (75.00%), Postives = 62/72 (86.11%), Query Frame = 3
Query:   57 IIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAHTGTRADKIRILKWHNIYKDHITLKDYEIPDGMGLELYY 272
            +IEVV NDRLGKKVRVKCN DDTIGDLKKL+AA TGTR +KI + KW+ I+KDH++L DYEI DGM LELYY
Sbjct:    1 MIEVVCNDRLGKKVRVKCNTDDTIGDLKKLIAAQTGTRWNKIVLKKWYTIFKDHVSLGDYEIHDGMNLELYY 72          
BLAST of CB610667 vs. ExPASy Swiss-Prot
Match: UBL5_MOUSE (Ubiquitin-like protein 5 OS=Mus musculus GN=Ubl5 PE=1 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 1.080e-25
Identity = 54/72 (75.00%), Postives = 62/72 (86.11%), Query Frame = 3
Query:   57 IIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAHTGTRADKIRILKWHNIYKDHITLKDYEIPDGMGLELYY 272
            +IEVV NDRLGKKVRVKCN DDTIGDLKKL+AA TGTR +KI + KW+ I+KDH++L DYEI DGM LELYY
Sbjct:    1 MIEVVCNDRLGKKVRVKCNTDDTIGDLKKLIAAQTGTRWNKIVLKKWYTIFKDHVSLGDYEIHDGMNLELYY 72          
BLAST of CB610667 vs. ExPASy Swiss-Prot
Match: UBL5_MESAU (Ubiquitin-like protein 5 OS=Mesocricetus auratus GN=UBL5 PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 1.080e-25
Identity = 54/72 (75.00%), Postives = 62/72 (86.11%), Query Frame = 3
Query:   57 IIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAHTGTRADKIRILKWHNIYKDHITLKDYEIPDGMGLELYY 272
            +IEVV NDRLGKKVRVKCN DDTIGDLKKL+AA TGTR +KI + KW+ I+KDH++L DYEI DGM LELYY
Sbjct:    1 MIEVVCNDRLGKKVRVKCNTDDTIGDLKKLIAAQTGTRWNKIVLKKWYTIFKDHVSLGDYEIHDGMNLELYY 72          
BLAST of CB610667 vs. ExPASy Swiss-Prot
Match: UBL5_HUMAN (Ubiquitin-like protein 5 OS=Homo sapiens GN=UBL5 PE=1 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 1.080e-25
Identity = 54/72 (75.00%), Postives = 62/72 (86.11%), Query Frame = 3
Query:   57 IIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAHTGTRADKIRILKWHNIYKDHITLKDYEIPDGMGLELYY 272
            +IEVV NDRLGKKVRVKCN DDTIGDLKKL+AA TGTR +KI + KW+ I+KDH++L DYEI DGM LELYY
Sbjct:    1 MIEVVCNDRLGKKVRVKCNTDDTIGDLKKLIAAQTGTRWNKIVLKKWYTIFKDHVSLGDYEIHDGMNLELYY 72          
BLAST of CB610667 vs. ExPASy Swiss-Prot
Match: UBL5_BOVIN (Ubiquitin-like protein 5 OS=Bos taurus GN=UBL5 PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 1.080e-25
Identity = 54/72 (75.00%), Postives = 62/72 (86.11%), Query Frame = 3
Query:   57 IIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAHTGTRADKIRILKWHNIYKDHITLKDYEIPDGMGLELYY 272
            +IEVV NDRLGKKVRVKCN DDTIGDLKKL+AA TGTR +KI + KW+ I+KDH++L DYEI DGM LELYY
Sbjct:    1 MIEVVCNDRLGKKVRVKCNTDDTIGDLKKLIAAQTGTRWNKIVLKKWYTIFKDHVSLGDYEIHDGMNLELYY 72          
BLAST of CB610667 vs. ExPASy Swiss-Prot
Match: UBL5_DANRE (Ubiquitin-like protein 5 OS=Danio rerio GN=ubl5 PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 4.105e-25
Identity = 52/72 (72.22%), Postives = 63/72 (87.50%), Query Frame = 3
Query:   57 IIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAHTGTRADKIRILKWHNIYKDHITLKDYEIPDGMGLELYY 272
            +IEVV NDRLGKKVRVKCN++DTIGDLKKL+AA TGTR +KI + KW+ I+K+H++L DYEI DGM LELYY
Sbjct:    1 MIEVVCNDRLGKKVRVKCNQEDTIGDLKKLIAAQTGTRWEKIVLKKWYTIFKNHVSLGDYEIHDGMNLELYY 72          
BLAST of CB610667 vs. ExPASy Swiss-Prot
Match: UBL5_CAEEL (Ubiquitin-like protein 5 OS=Caenorhabditis elegans GN=ubl-5 PE=2 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 2.661e-24
Identity = 50/72 (69.44%), Postives = 59/72 (81.94%), Query Frame = 3
Query:   57 IIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAHTGTRADKIRILKWHNIYKDHITLKDYEIPDGMGLELYY 272
            +IE+ +NDRLGKKVR+KCN  DTIGDLKKL+AA TGTR +KI + KW+ IYKDHITL DYEI +G   ELYY
Sbjct:    1 MIEITVNDRLGKKVRIKCNPSDTIGDLKKLIAAQTGTRWEKIVLKKWYTIYKDHITLMDYEIHEGFNFELYY 72          
BLAST of CB610667 vs. ExPASy Swiss-Prot
Match: UBL5_DROME (Ubiquitin-like protein 5 OS=Drosophila melanogaster GN=ubl PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 5.928e-24
Identity = 51/72 (70.83%), Postives = 59/72 (81.94%), Query Frame = 3
Query:   57 IIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAHTGTRADKIRILKWHNIYKDHITLKDYEIPDGMGLELYY 272
            +IE+  NDRLGKKVRVKCN DDTIGDLKKL+AA TGT+ +KI + KW+ I+KD I L DYEI DGM LELYY
Sbjct:    1 MIEITCNDRLGKKVRVKCNPDDTIGDLKKLIAAQTGTKHEKIVLKKWYTIFKDPIRLSDYEIHDGMNLELYY 72          
BLAST of CB610667 vs. ExPASy Swiss-Prot
Match: HUB1_SCHPO (Ubiquitin-like modifier hub1 OS=Schizosaccharomyces pombe GN=hub1 PE=1 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 1.725e-23
Identity = 50/73 (68.49%), Postives = 60/73 (82.19%), Query Frame = 3
Query:   57 IIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAHTGTRADKIRILKWHNIYKDHITLKDYEIPDGMGLELYYS 275
            +IEV+ NDRLGKKVRVKC  DDT+GD KKLVAA TGT   +I + KWH+++KD+ITL DYEI DGM LE+YYS
Sbjct:    1 MIEVLCNDRLGKKVRVKCMPDDTVGDFKKLVAAQTGTDPRRIVLKKWHSVFKDNITLADYEIHDGMSLEMYYS 73          
The following BLAST results are available for this feature:
BLAST of CB610667 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 16
Match NameE-valueIdentityDescription
UBL5_ARATH3.467e-3289.04Ubiquitin-like protein 5 OS=Arabidopsis thaliana G... [more]
UBL5_PSAOB1.080e-2575.00Ubiquitin-like protein 5 OS=Psammomys obesus GN=UB... [more]
UBL5_MOUSE1.080e-2575.00Ubiquitin-like protein 5 OS=Mus musculus GN=Ubl5 P... [more]
UBL5_MESAU1.080e-2575.00Ubiquitin-like protein 5 OS=Mesocricetus auratus G... [more]
UBL5_HUMAN1.080e-2575.00Ubiquitin-like protein 5 OS=Homo sapiens GN=UBL5 P... [more]
UBL5_BOVIN1.080e-2575.00Ubiquitin-like protein 5 OS=Bos taurus GN=UBL5 PE=... [more]
UBL5_DANRE4.105e-2572.22Ubiquitin-like protein 5 OS=Danio rerio GN=ubl5 PE... [more]
UBL5_CAEEL2.661e-2469.44Ubiquitin-like protein 5 OS=Caenorhabditis elegans... [more]
UBL5_DROME5.928e-2470.83Ubiquitin-like protein 5 OS=Drosophila melanogaste... [more]
HUB1_SCHPO1.725e-2368.49Ubiquitin-like modifier hub1 OS=Schizosaccharomyce... [more]

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Properties
Property NameValue
Genbank descriptionALBEDO0003_IIIaF_G08 Mature Albedo Citrus sinensis cDNA clone ALBEDO0003_IIIaF_G08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB610667 ID=CB610667; Name=CB610667; organism=Citrus sinensis; type=EST; length=387bp
GGGGAGCGAGAAAATCCCTTATCATTCGGCNGGGAAAATCAAAACAGGAG
ACAAAGATCATTGAGGTGGTGCTGAACGACAGGCTCGGGAAGAAGGTGCG
CGTGAAGTGCAACGAAGACGACACCATAGGCGACTTGAAGAAGCTGGTGG
CGGCTCACACCGGGACTCGAGCCGACAAGATTCGGATTCTGAAGTGGCAC
AACATCTACAAGGACCACATCACTCTCAAGGACTACGAGATTCCCGATGG
CATGGGCCTTGAACTCTATTACAGCTAAATCCACCGTTAAATATATATGC
TGCTGCAAGCAGTCAATACTACTAGGAACCATATGATATAATAAGCAAGG
GGTATTGGAAGATGCTGGACGGCCAAGTTTACTATGA
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