CB610668

Overview
NameCB610668
Unique NameCB610668
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length753
Libraries
Library NameType
Mature Albedocdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB610668 vs. ExPASy Swiss-Prot
Match: DS1PP_SCHPO (Dihydrosphingosine 1-phosphate phosphatase C823.11 OS=Schizosaccharomyces pombe GN=SPAC823.11 PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 4.269e-19
Identity = 59/183 (32.24%), Postives = 94/183 (51.37%), Query Frame = 3
Query:  207 QKLRSLLQPWVTHYVIIGTAFILQIQKY-QHKFLDSLFPGLSCVVSVPFYTGFLPLVFWSGHVKLARHMTLLMAFCDYLGNTIKDTVSAPRPSCPPVRRVTATKDEKENALEYGLPSSHTLNTVCLAGYLLHYVLSYSQNNYAVTQFAGVALFCLLVGLIAVGRIYLGMHSXXDIIAGLALGL 752
            + LR  L+  +   V   T  + +IQ + ++ +LD  F   + + +  F+   LP+ FWSG +     +T L A   Y    IKD    PRP  PP+ R+T + D +    EYG PS+HT N +    Y L  +LS S +  +++ +  ++L  L +  I++GRIY GMH   D+  G  LG+
Sbjct:   32 ESLRFQLRELILPIVRKETRLLYKIQSFFRNPWLDVYFMYTATLGTHVFFMLALPIFFWSGCIYYTLDITQLFAAGVYFSGCIKDYFCLPRPRSPPMVRLTLSSDAE---YEYGFPSTHTTNAMATGFYSLFLLLSMSDSMSSISYYFLLSLVLLYIASISLGRIYCGMHGFMDVSTGTILGV 211          
BLAST of CB610668 vs. ExPASy Swiss-Prot
Match: DS1P2_YEAST (Dihydrosphingosine 1-phosphate phosphatase YSR3 OS=Saccharomyces cerevisiae GN=YSR3 PE=2 SV=2)

HSP 1 Score: 82.4185 bits (202), Expect = 2.864e-15
Identity = 54/180 (30.00%), Postives = 86/180 (47.78%), Query Frame = 3
Query:  213 LRSLLQPWVTHYVIIGTAFILQIQK-YQHKFLDSLFPGLSCVVSVPFYTGFLPLVFWSGHVKLARHMTLLMAFCDYLGNTIKDTVSAPRPSCPPVRRVTATKDEKENALEYGLPSSHTLNTVCLAGYLLHYVLSYSQNNYAVTQFAGVALFCLLVGLIAVGRIYLGMHSXXDIIAGLALG 749
            LR   + ++T +    + F+  +QK ++  F D  F   S + S  FY   LP+  W G+  L R M  ++ +  YL   +KD    PRP  PPV R+T +   +    EYG PSSH+ N   ++  L  + +  S      T+   ++L       +  GR+Y GMH   D+ +G A+G
Sbjct:   48 LRFQTRQYLTRFTDNQSDFVHSLQKKHRTPFRDVYFKYTSLMGSHMFYVIVLPMPVWLGYRDLTRDMIYVLGYSIYLSGYLKDYWCLPRPKSPPVDRITLS---EYTTKEYGAPSSHSANATAVS-LLFFWRICLSDTLVWPTKLLLLSLVIFYYLTLVFGRVYCGMHGMLDLFSGAAVG 223          
BLAST of CB610668 vs. ExPASy Swiss-Prot
Match: DS1P1_YEAST (Dihydrosphingosine 1-phosphate phosphatase LCB3 OS=Saccharomyces cerevisiae GN=LCB3 PE=1 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.864e-15
Identity = 49/158 (31.01%), Postives = 77/158 (48.73%), Query Frame = 3
Query:  282 QKYQHKFLDSLFPGLSCVVSVPFYTGFLPLVFWSGHVKLARHMTLLMAFCDYLGNTIKDTVSAPRPSCPPVRRVTATKDEKENALEYGLPSSHTLNTVCLAGYLLHYVLSYSQNNYAVTQFAG-VALFCLLVGLIAVGRIYLGMHSXXDIIAGLALGL 752
            +KY+  F D  F   S + S  FY   LP+  W G+ +  + M  ++ +  YL    KD    PRP  PP+ R+T +   +    EYG PSSHT N   ++   L+ +    +++  V      V LF  +   +  GRIY GMH   D+++G  +G+
Sbjct:   71 KKYRSAFNDLYFTYTSLMGSHTFYVLCLPMPVWFGYFETTKDMVYILGYSIYLSGFFKDYWCLPRPRAPPLHRITLS---EYTTKEYGAPSSHTANATGVSLLFLYNIWRMQESSVMVQLLLSCVVLFYYMT--LVFGRIYCGMHGILDLVSGGLIGI 223          
BLAST of CB610668 vs. ExPASy Swiss-Prot
Match: SGPP2_HUMAN (Sphingosine-1-phosphate phosphatase 2 OS=Homo sapiens GN=SGPP2 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 5.400e-14
Identity = 48/158 (30.38%), Postives = 76/158 (48.10%), Query Frame = 3
Query:  279 IQKYQHK--FLDSLFPGLSCVVSVPFYTGFLPLVFWSGHVKLARHMTLLMAFCDYLGNTIKDTVSAPRPSCPPVRRVTATKDEKENALEYGLPSSHTLNTVCLAGYLLHYVLSYSQNNYAVTQFAGVALFCLLVGLIAVGRIYLGMHSXXDIIAGLAL 746
            +QKY  K  F   LF   + +    FY  FLP   W+    L+R + ++     Y+G   KD +  PRPS PPV      K EK    EYG+PS+H +    +A  LL   +   Q  + +    G+ +  +   L+ + R+Y GMH+  D++ G+ +
Sbjct:   76 VQKYVVKNYFYYYLFQFSAALGQEVFYITFLPFTHWNIDPYLSRRLIIIWVLVMYIGQVAKDVLKWPRPSSPPV-----VKLEKRLIAEYGMPSTHAMAATAIAFTLLISTMDRYQYPFVL----GLVMAVVFSTLVCLSRLYTGMHTVLDVLGGVLI 224          
BLAST of CB610668 vs. ExPASy Swiss-Prot
Match: SGPP2_MOUSE (Sphingosine-1-phosphate phosphatase 2 OS=Mus musculus GN=Sgpp2 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.500e-13
Identity = 41/133 (30.83%), Postives = 66/133 (49.62%), Query Frame = 3
Query:  348 FYTGFLPLVFWSGHVKLARHMTLLMAFCDYLGNTIKDTVSAPRPSCPPVRRVTATKDEKENALEYGLPSSHTLNTVCLAGYLLHYVLSYSQNNYAVTQFAGVALFCLLVGLIAVGRIYLGMHSXXDIIAGLAL 746
            FY  FLP   W+    L+R + ++     Y+G   KD +  PRPS PPV R+     EK    EYG+PS+H +    ++  L    L  + + Y      G+ +  +   L+ + R+Y GMH+  DI+ G+ +
Sbjct:   56 FYITFLPFTHWNIDPNLSRRLVVIWVLVMYIGQVAKDILKWPRPSFPPVVRL-----EKRIIAEYGMPSTHAMAATAISFTL----LISTMDRYQYPFILGLMMAVVFSTLVCLSRLYTGMHTVLDILGGVLI 179          
BLAST of CB610668 vs. ExPASy Swiss-Prot
Match: SGPP1_MOUSE (Sphingosine-1-phosphate phosphatase 1 OS=Mus musculus GN=Sgpp1 PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.276e-11
Identity = 39/130 (30.00%), Postives = 65/130 (50.00%), Query Frame = 3
Query:  348 FYTGFLPLVFWSGHVKLARHMTLLMAFCDYLGNTIKDTVSAPRPSCPPVRRVTATKDEKENALEYGLPSSHTLNTVCLAGYLLHYVLSYSQNNYAVTQFAGVALFCLLVGLIAVGRIYLGMHSXXDIIAG 737
            FY  F P   W+    + R + ++     YLG   KD +  PRP+ PPV ++    +      EY +PS+H ++   +   +  ++L+Y +  Y +    G+ L      L+ + RIY+GMHS  D+IAG
Sbjct:  132 FYILFFPFWIWNLDPFVGRRLVIIWVLVMYLGQCTKDIIRWPRPASPPVIKLEVFYNS-----EYSMPSTHAMSGTAIP--IAMFLLTYGRWQYPL--IYGLILIPCWSSLVCLSRIYMGMHSILDVIAG 252          
BLAST of CB610668 vs. ExPASy Swiss-Prot
Match: SGPP1_HUMAN (Sphingosine-1-phosphate phosphatase 1 OS=Homo sapiens GN=SGPP1 PE=1 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 7.299e-11
Identity = 40/130 (30.77%), Postives = 64/130 (49.23%), Query Frame = 3
Query:  348 FYTGFLPLVFWSGHVKLARHMTLLMAFCDYLGNTIKDTVSAPRPSCPPVRRVTATKDEKENALEYGLPSSHTLNTVCLAGYLLHYVLSYSQNNYAVTQFAGVALFCLLVGLIAVGRIYLGMHSXXDIIAG 737
            FY  F P   W+    + R + ++     YLG   KD +  PRP+ PPV ++    +      EY +PS+H ++   +   +   +L+Y +  Y +    G+ L      L+ + RIY+GMHS  DIIAG
Sbjct:  143 FYILFFPFWIWNLDPLVGRRLVVIWVLVMYLGQCTKDIIRWPRPASPPVVKLEVFYNS-----EYSMPSTHAMSGTAIP--ISMVLLTYGRWQYPL--IYGLILIPCWCSLVCLSRIYMGMHSILDIIAG 263          
The following BLAST results are available for this feature:
BLAST of CB610668 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
DS1PP_SCHPO4.269e-1932.24Dihydrosphingosine 1-phosphate phosphatase C823.11... [more]
DS1P2_YEAST2.864e-1530.00Dihydrosphingosine 1-phosphate phosphatase YSR3 OS... [more]
DS1P1_YEAST2.864e-1531.01Dihydrosphingosine 1-phosphate phosphatase LCB3 OS... [more]
SGPP2_HUMAN5.400e-1430.38Sphingosine-1-phosphate phosphatase 2 OS=Homo sapi... [more]
SGPP2_MOUSE3.500e-1330.83Sphingosine-1-phosphate phosphatase 2 OS=Mus muscu... [more]
SGPP1_MOUSE3.276e-1130.00Sphingosine-1-phosphate phosphatase 1 OS=Mus muscu... [more]
SGPP1_HUMAN7.299e-1130.77Sphingosine-1-phosphate phosphatase 1 OS=Homo sapi... [more]
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Properties
Property NameValue
Genbank descriptionALBEDO0003_IIIaF_D11 Mature Albedo Citrus sinensis cDNA clone ALBEDO0003_IIIaF_D11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB610668 ID=CB610668; Name=CB610668; organism=Citrus sinensis; type=EST; length=753bp
GGGGAAGAAATTCACACAAAGATTTCTAGATTTTCTCTTTATATTCAAAT
TCACTCTCTCTAAAGTCTTCTTCCTTTTGATTTTTGATCCCTCTCTCATT
GAAGAGGGAAGAAGATACAATGGAGAGCGTATTAGCAGCGTGGCAAGTGG
CGACCTTAGGTGGGATTGTGTCGTGGATTATGATATCTTCATGTCTAAAT
GTGACTCAAAAGCTCAGATCTTTGCTGCAGCCTTGGGTGACTCACTATGT
CATCATTGGCACCGCTTTCATTCTCCAGATCCAGAAATACCAGCATAAGT
TTTTGGATTCTCTGTTTCCTGGCTTGTCTTGCGTTGTTTCAGTGCCATTT
TACACTGGATTTTTGCCTTTGGTCTTCTGGAGTGGGCATGTGAAATTGGC
TCGGCACATGACTCTTTTGATGGCCTTTTGTGATTATTTAGGGAACACTA
TAAAGGATACAGTATCAGCTCCTAGACCAAGTTGCCCTCCTGTGAGGAGA
GTAACTGCCACAAAAGATGAGAAAGAGAATGCCTTGGAATATGGATTGCC
TTCTTCTCACACTCTCAATACAGTTTGCTTAGCAGGATATCTTTTGCACT
ATGTCCTATCTTATTCCCAAAATAATTATGCCGTTACTCAGTTTGCTGGA
GTTGCCCTTTTTTGCTTGCTTGTGGGCCTCATTGCTGTAGGAAGAATCTA
CCTTGGCATGCACAGTTNGNTTGACATCATTGCCGGGCTGGCTTTAGGAT
TGG
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