CB610673

Overview
NameCB610673
Unique NameCB610673
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length636
Libraries
Library NameType
Mature Albedocdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2984 contig Csv1_Contig2984:104..740. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB610673 vs. ExPASy Swiss-Prot
Match: HSP16_SOYBN (18.5 kDa class I heat shock protein OS=Glycine max GN=HSP18.5-C PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 7.352e-46
Identity = 47/66 (71.21%), Postives = 54/66 (81.82%), Query Frame = 2
Query:   50 MSLIPSFFGNRRSSVSDPFSLDVWDPFRDFPFPSGYSSALSSQFPPETSAVVNARVDWKETPEAHV 247
            MSLIP+FFG RR++V DPFSLDVWDPF+DFPFP+  SSA   +F  E SA V+ RVDWKETPEAHV
Sbjct:    1 MSLIPNFFGGRRNNVFDPFSLDVWDPFKDFPFPNTLSSASFPEFSRENSAFVSTRVDWKETPEAHV 66          

HSP 2 Score: 101.293 bits (251), Expect = 7.352e-46
Identity = 52/94 (55.32%), Postives = 59/94 (62.77%), Query Frame = 1
Query:  250 KADLPGLXXXXXXXXXXXXXXLQISGQRKIEKEDKNDTWHRVERSSGMFSRRFRLPENVKMDQIKASMESGXXXXXXXXXXXXXXXXXAIEISG 531
            KAD+PGL              LQISG+R +EKEDKNDTWHRVERSSG F RRFRLPEN K++Q+KASME+G                 AIEISG
Sbjct:   68 KADIPGLKKEEVKVQIEDDKVLQISGERNVEKEDKNDTWHRVERSSGKFMRRFRLPENAKVEQVKASMENGVLTVTVPKEEVKKPDVKAIEISG 161          
BLAST of CB610673 vs. ExPASy Swiss-Prot
Match: HSP12_MEDSA (18.2 kDa class I heat shock protein OS=Medicago sativa GN=HSP18.2 PE=2 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 7.976e-45
Identity = 50/66 (75.76%), Postives = 55/66 (83.33%), Query Frame = 2
Query:   50 MSLIPSFFGNRRSSVSDPFSLDVWDPFRDFPFPSGYSSALSSQFPPETSAVVNARVDWKETPEAHV 247
            MSLIPSFFG RRS+V DPFSLDVWDPF+DFPF    +SALS+ FP E SA V+ RVDWKETPEAHV
Sbjct:    1 MSLIPSFFGGRRSNVFDPFSLDVWDPFKDFPF---NNSALSASFPRENSAFVSTRVDWKETPEAHV 63          

HSP 2 Score: 97.0561 bits (240), Expect = 7.976e-45
Identity = 49/94 (52.13%), Postives = 57/94 (60.64%), Query Frame = 1
Query:  250 KADLPGLXXXXXXXXXXXXXXLQISGQRKIEKEDKNDTWHRVERSSGMFSRRFRLPENVKMDQIKASMESGXXXXXXXXXXXXXXXXXAIEISG 531
            KADLPG+              LQISG+R +EKEDKND WHR+ERSSG F RRFRLPEN KMDQ+KA+ME+G                  I+ISG
Sbjct:   65 KADLPGMKKEEVKVEIEDDRVLQISGERSVEKEDKNDQWHRLERSSGKFMRRFRLPENAKMDQVKAAMENGVLTVTVPKEEVKKPEVKTIDISG 158          
BLAST of CB610673 vs. ExPASy Swiss-Prot
Match: HSP11_SOYBN (17.3 kDa class I heat shock protein OS=Glycine max GN=HSP17.3-B PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 8.653e-44
Identity = 51/94 (54.26%), Postives = 58/94 (61.70%), Query Frame = 1
Query:  250 KADLPGLXXXXXXXXXXXXXXLQISGQRKIEKEDKNDTWHRVERSSGMFSRRFRLPENVKMDQIKASMESGXXXXXXXXXXXXXXXXXAIEISG 531
            KAD+PGL              LQISG+R +EKEDKNDTWHRVERSSG   RRFRLPEN K+DQ+KASME+G                 AI+ISG
Sbjct:   60 KADIPGLKKEEVKLEIQDGRVLQISGERNVEKEDKNDTWHRVERSSGKLVRRFRLPENAKVDQVKASMENGVLTVTVPKEEIKKPDVKAIDISG 153          

HSP 2 Score: 97.8265 bits (242), Expect = 8.653e-44
Identity = 48/66 (72.73%), Postives = 51/66 (77.27%), Query Frame = 2
Query:   50 MSLIPSFFGNRRSSVSDPFSLDVWDPFRDFPFPSGYSSALSSQFPPETSAVVNARVDWKETPEAHV 247
            MSLIPSFFG RRSSV DPFSLDVWDPF+DFPFPS  S+        E SA V+ RVDWKETPEAHV
Sbjct:    1 MSLIPSFFGGRRSSVFDPFSLDVWDPFKDFPFPSSLSA--------ENSAFVSTRVDWKETPEAHV 58          
BLAST of CB610673 vs. ExPASy Swiss-Prot
Match: HSP11_PEA (18.1 kDa class I heat shock protein OS=Pisum sativum GN=HSP18.1 PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.221e-42
Identity = 52/94 (55.32%), Postives = 58/94 (61.70%), Query Frame = 1
Query:  250 KADLPGLXXXXXXXXXXXXXXLQISGQRKIEKEDKNDTWHRVERSSGMFSRRFRLPENVKMDQIKASMESGXXXXXXXXXXXXXXXXXAIEISG 531
            KADLPGL              LQISG+R +EKEDKND WHRVERSSG F RRFRLPEN KMD++KASME+G                 +IEISG
Sbjct:   65 KADLPGLKKEEVKVEVEDDRVLQISGERSVEKEDKNDEWHRVERSSGKFLRRFRLPENAKMDKVKASMENGVLTVTVPKEEIKKAEVKSIEISG 158          

HSP 2 Score: 93.2041 bits (230), Expect = 1.221e-42
Identity = 45/66 (68.18%), Postives = 51/66 (77.27%), Query Frame = 2
Query:   50 MSLIPSFFGNRRSSVSDPFSLDVWDPFRDFPFPSGYSSALSSQFPPETSAVVNARVDWKETPEAHV 247
            MSLIPSFF  RRS+V DPFSLDVWDP +DFPF    +S+ S+ FP E  A V+ RVDWKETPEAHV
Sbjct:    1 MSLIPSFFSGRRSNVFDPFSLDVWDPLKDFPFS---NSSPSASFPRENPAFVSTRVDWKETPEAHV 63          
BLAST of CB610673 vs. ExPASy Swiss-Prot
Match: HSP13_SOYBN (17.5 kDa class I heat shock protein OS=Glycine max GN=HSP17.5-M PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 5.983e-42
Identity = 51/94 (54.26%), Postives = 59/94 (62.77%), Query Frame = 1
Query:  250 KADLPGLXXXXXXXXXXXXXXLQISGQRKIEKEDKNDTWHRVERSSGMFSRRFRLPENVKMDQIKASMESGXXXXXXXXXXXXXXXXXAIEISG 531
            +AD+PGL              LQISG+R +EKEDKNDTWHRVERSSG F RRFRLPEN K++Q+KASME+G                 AIEISG
Sbjct:   60 EADIPGLKKEEVKVQIEDDRVLQISGERNLEKEDKNDTWHRVERSSGNFMRRFRLPENAKVEQVKASMENGVLTVTVPKEEVKKPDVKAIEISG 153          

HSP 2 Score: 91.6633 bits (226), Expect = 5.983e-42
Identity = 45/66 (68.18%), Postives = 49/66 (74.24%), Query Frame = 2
Query:   50 MSLIPSFFGNRRSSVSDPFSLDVWDPFRDFPFPSGYSSALSSQFPPETSAVVNARVDWKETPEAHV 247
            MSLIPS FG RRS+V DPFSLDVWDPF+DF FP+  S+        E SA VN RVDWKETPEAHV
Sbjct:    1 MSLIPSIFGGRRSNVFDPFSLDVWDPFKDFHFPTSLSA--------ENSAFVNTRVDWKETPEAHV 58          
BLAST of CB610673 vs. ExPASy Swiss-Prot
Match: HS17B_ARATH (17.6 kDa class I heat shock protein 2 OS=Arabidopsis thaliana GN=HSP17.6B PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 7.013e-40
Identity = 52/94 (55.32%), Postives = 61/94 (64.89%), Query Frame = 1
Query:  250 KADLPGLXXXXXXXXXXXXXXLQISGQRKIEKEDKNDTWHRVERSSGMFSRRFRLPENVKMDQIKASMESGXXXXXXXXXXXXXXXXXAIEISG 531
            KADLPGL              L+ISG+R +EKEDKNDTWHRVERSSG F+RRFRLPENVKMDQ+KA+ME+G                 +I+ISG
Sbjct:   60 KADLPGLKKEEVKVEIEEDSVLKISGERHVEKEDKNDTWHRVERSSGQFTRRFRLPENVKMDQVKAAMENGVLTVTVPKAETKKADVKSIQISG 153          

HSP 2 Score: 81.2629 bits (199), Expect = 7.013e-40
Identity = 41/67 (61.19%), Postives = 48/67 (71.64%), Query Frame = 2
Query:   50 MSLIPSFFGN-RRSSVSDPFSLDVWDPFRDFPFPSGYSSALSSQFPPETSAVVNARVDWKETPEAHV 247
            MS+IPSFF N RRS++ DPFSLDVWDPF++           SS    E SA+VNARVDW+ETPEAHV
Sbjct:    1 MSMIPSFFNNNRRSNIFDPFSLDVWDPFKELT---------SSSLSRENSAIVNARVDWRETPEAHV 58          
BLAST of CB610673 vs. ExPASy Swiss-Prot
Match: HSP11_DAUCA (17.8 kDa class I heat shock protein OS=Daucus carota PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 9.134e-40
Identity = 45/66 (68.18%), Postives = 53/66 (80.30%), Query Frame = 2
Query:   50 MSLIPSFFGNRRSSVSDPFSLDVWDPFRDFPFPSGYSSALSSQFPPETSAVVNARVDWKETPEAHV 247
            MS+IPSFFG RRS+V DPFSLDVWDPF+DFP  +  SSA  S+F  ET+A VN  +DWKETP+AHV
Sbjct:    1 MSIIPSFFGGRRSNVFDPFSLDVWDPFKDFPLVT--SSA--SEFGKETAAFVNTHIDWKETPQAHV 62          

HSP 2 Score: 91.2781 bits (225), Expect = 9.134e-40
Identity = 48/94 (51.06%), Postives = 56/94 (59.57%), Query Frame = 1
Query:  250 KADLPGLXXXXXXXXXXXXXXLQISGQRKIEKEDKNDTWHRVERSSGMFSRRFRLPENVKMDQIKASMESGXXXXXXXXXXXXXXXXXAIEISG 531
            KADLPGL              LQISG+R  EKE+KND WHRVERSSG F RRFRLPEN K+D++KA+M +G                 AI+ISG
Sbjct:   64 KADLPGLKKEEVKVELEEGKVLQISGERNKEKEEKNDKWHRVERSSGKFLRRFRLPENAKVDEVKAAMANGVVTVTVPKVEIKKPEVKAIDISG 157          
BLAST of CB610673 vs. ExPASy Swiss-Prot
Match: HS178_ARATH (17.8 kDa class I heat shock protein OS=Arabidopsis thaliana GN=HSP17.8 PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.190e-39
Identity = 45/71 (63.38%), Postives = 54/71 (76.06%), Query Frame = 1
Query:  250 KADLPGLXXXXXXXXXXXXXXLQISGQRKIEKEDKNDTWHRVERSSGMFSRRFRLPENVKMDQIKASMESG 462
            KADLPG+              L+ISG+R +EKE+K DTWHRVERSSG FSR+F+LPENVKMDQ+KASME+G
Sbjct:   62 KADLPGMKKEEVKVEIEDDSVLKISGERHVEKEEKQDTWHRVERSSGQFSRKFKLPENVKMDQVKASMENG 132          

HSP 2 Score: 86.6557 bits (213), Expect = 1.190e-39
Identity = 44/68 (64.71%), Postives = 49/68 (72.06%), Query Frame = 2
Query:   50 MSLIPSFFGNRR--SSVSDPFSLDVWDPFRDFPFPSGYSSALSSQFPPETSAVVNARVDWKETPEAHV 247
            MSLIPSFFGN R  +S+ DPFSLDVWDPF++  FPS  S         ETSA+ NARVDWKET EAHV
Sbjct:    1 MSLIPSFFGNNRRSNSIFDPFSLDVWDPFKELQFPSSLSG--------ETSAITNARVDWKETAEAHV 60          
BLAST of CB610673 vs. ExPASy Swiss-Prot
Match: HSP15_SOYBN (17.6 kDa class I heat shock protein OS=Glycine max GN=HSP17.6-L PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.678e-38
Identity = 49/95 (51.58%), Postives = 58/95 (61.05%), Query Frame = 1
Query:  247 VKADLPGLXXXXXXXXXXXXXXLQISGQRKIEKEDKNDTWHRVERSSGMFSRRFRLPENVKMDQIKASMESGXXXXXXXXXXXXXXXXXAIEISG 531
            +KAD+PGL              LQISG+R +EKEDKNDTWHRV+RSSG F RRFRLPEN K++Q+KA ME+G                  IEISG
Sbjct:   60 LKADIPGLKKEEVKVQIEDDRVLQISGERNVEKEDKNDTWHRVDRSSGKFMRRFRLPENAKVEQVKACMENGVLTVTIPKEEVKKSDVKPIEISG 154          

HSP 2 Score: 82.4185 bits (202), Expect = 1.678e-38
Identity = 42/66 (63.64%), Postives = 46/66 (69.70%), Query Frame = 2
Query:   50 MSLIPSFFGNRRSSVSDPFSLDVWDPFRDFPFPSGYSSALSSQFPPETSAVVNARVDWKETPEAHV 247
            MSLIPS FG  RS+V DPFSLD+WDPF+DF  P+   SA       E SA VN RVDWKET EAHV
Sbjct:    1 MSLIPSIFGGPRSNVFDPFSLDMWDPFKDFHVPTSSVSA-------ENSAFVNTRVDWKETQEAHV 59          
BLAST of CB610673 vs. ExPASy Swiss-Prot
Match: HSP12_SOLPE (17.6 kDa class I heat shock protein OS=Solanum peruvianum PE=2 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 6.299e-38
Identity = 54/94 (57.45%), Postives = 59/94 (62.77%), Query Frame = 1
Query:  250 KADLPGLXXXXXXXXXXXXXXLQISGQRKIEKEDKNDTWHRVERSSGMFSRRFRLPENVKMDQIKASMESGXXXXXXXXXXXXXXXXXAIEISG 531
            KADLPGL              LQISG+R +EKEDKNDTWHRVERSSG F RRFRLPEN KMDQ+KASME+G                 +IEISG
Sbjct:   61 KADLPGLKKEEVKVEVEEDRVLQISGERNVEKEDKNDTWHRVERSSGKFMRRFRLPENAKMDQVKASMENGVLTVTVPKEEVNNPDVKSIEISG 154          

HSP 2 Score: 73.1738 bits (178), Expect = 6.299e-38
Identity = 39/67 (58.21%), Postives = 45/67 (67.16%), Query Frame = 2
Query:   50 MSLIPSFFGNRRS-SVSDPFSLDVWDPFRDFPFPSGYSSALSSQFPPETSAVVNARVDWKETPEAHV 247
            MSLIP  FG+RRS SV DPFS+DV+DPF++  F    S         ETSA  N R+DWKETPEAHV
Sbjct:    1 MSLIPRIFGDRRSTSVFDPFSIDVFDPFKELGFTVSNSG--------ETSAFANTRIDWKETPEAHV 59          
The following BLAST results are available for this feature:
BLAST of CB610673 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 36
Match NameE-valueIdentityDescription
HSP16_SOYBN7.352e-4671.2118.5 kDa class I heat shock protein OS=Glycine max... [more]
HSP12_MEDSA7.976e-4575.7618.2 kDa class I heat shock protein OS=Medicago sa... [more]
HSP11_SOYBN8.653e-4454.2617.3 kDa class I heat shock protein OS=Glycine max... [more]
HSP11_PEA1.221e-4255.3218.1 kDa class I heat shock protein OS=Pisum sativ... [more]
HSP13_SOYBN5.983e-4254.2617.5 kDa class I heat shock protein OS=Glycine max... [more]
HS17B_ARATH7.013e-4055.3217.6 kDa class I heat shock protein 2 OS=Arabidops... [more]
HSP11_DAUCA9.134e-4068.1817.8 kDa class I heat shock protein OS=Daucus caro... [more]
HS178_ARATH1.190e-3963.3817.8 kDa class I heat shock protein OS=Arabidopsis... [more]
HSP15_SOYBN1.678e-3851.5817.6 kDa class I heat shock protein OS=Glycine max... [more]
HSP12_SOLPE6.299e-3857.4517.6 kDa class I heat shock protein OS=Solanum per... [more]

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Properties
Property NameValue
Genbank descriptionALBEDO0003_IIIaF_E05 Mature Albedo Citrus sinensis cDNA clone ALBEDO0003_IIIaF_E05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB610673 ID=CB610673; Name=CB610673; organism=Citrus sinensis; type=EST; length=636bp
GGGGATCAGCAGCAAAATACCGAAAGCCGTATCACTCTATTGAGAAACGA
TGTCGTTGATTCCAAGCTTCTTCGGAAACCGACGCAGCAGTGTCTCTGAT
CCATTTTCACTCGACGTTTGGGATCCATTCAGGGACTTCCCTTTCCCTTC
CGGTTATTCGTCTGCGCTGTCCTCTCAGTTCCCTCCAGAAACCTCTGCTG
TCGTTAATGCCCGCGTGGACTGGAAGGAAACCCCGGAAGCCCACGTGTCA
AGGCCGATCTTCCGGGGCTCCGGAAAGAGGAAGTGAAGGTCGAGGTCGAA
GACGACAGGGTGCTTCAGATAAGCGGTCAGAGGAAGATTGAGAAGGAAGA
CAAGAACGACACGTGGCATCGCGTTGAGCGCAGCAGTGGCATGTTCTCAA
GGAGGTTCAGGTTACCTGAGAATGTGAAGATGGATCAGATTAAGGCTTCC
ATGGAGAGTGGTGTGCTCACTGTTACTGTTCCGAAAGTGGAGGTGACCAA
ACCTGATGTTAAGGCTATCGAAATCTCTGGTTAAACCAGTGTCTGTCTGT
ATGTCTTTATGCATACTTGTATAAGGATGCTGTGATGTTTTGGTTTTGTA
ATTTGCTTGCATGAATGTTTGTGTAATGGGATTCTG
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