CB610696

Overview
NameCB610696
Unique NameCB610696
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length504
Libraries
Library NameType
Mature Albedocdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13714 contig Csv1_Contig13714:428..931. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB610696 vs. ExPASy Swiss-Prot
Match: HS181_ARATH (18.1 kDa class I heat shock protein OS=Arabidopsis thaliana GN=HSP18.1 PE=2 SV=1)

HSP 1 Score: 207.223 bits (526), Expect = 3.428e-53
Identity = 102/145 (70.34%), Postives = 118/145 (81.38%), Query Frame = 3
Query:   75 MSLIPSIFGGRRTNVFDPVSLDVWDPFDGFL--SSALTYAPSSARETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNGKVEQVKATMENGVLTIADPK 503
            MSLIPSIFGGRR+NVFDP S D+WDPF+GF   SSAL  A S+AR+ + F NAR+DWKETP+AHVFKADLPGL+            +LQISGERSKE EEKNDKWHRVER+SGKF+RRFRLP+N K+E+VKATMENGVLT+  PK
Sbjct:    1 MSLIPSIFGGRRSNVFDPFSQDLWDPFEGFFTPSSALANA-STARDVAAFTNARVDWKETPEAHVFKADLPGLKKEEVKVEVEDKNVLQISGERSKENEEKNDKWHRVERASGKFMRRFRLPENAKMEEVKATMENGVLTVVVPK 144          
BLAST of CB610696 vs. ExPASy Swiss-Prot
Match: HSP17_ARATH (17.4 kDa class I heat shock protein OS=Arabidopsis thaliana GN=HSP17.4A PE=1 SV=2)

HSP 1 Score: 206.453 bits (524), Expect = 5.848e-53
Identity = 97/143 (67.83%), Postives = 116/143 (81.12%), Query Frame = 3
Query:   75 MSLIPSIFGGRRTNVFDPVSLDVWDPFDGFLSSALTYAPSSARETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNGKVEQVKATMENGVLTIADPK 503
            MSL+PS FGGRRTNVFDP SLDVWDPF+GFL+  LT AP  A++ + F NA++DW+ETP+AHVFKAD+PGL+          G ILQISGERS E EEK+D WHRVERSSGKF+RRFRLP+N KVE+VKA+MENGVL++  PK
Sbjct:    1 MSLVPSFFGGRRTNVFDPFSLDVWDPFEGFLTPGLTNAP--AKDVAAFTNAKVDWRETPEAHVFKADVPGLKKEEVKVEVEDGNILQISGERSSENEEKSDTWHRVERSSGKFMRRFRLPENAKVEEVKASMENGVLSVTVPK 141          
BLAST of CB610696 vs. ExPASy Swiss-Prot
Match: HS17C_ARATH (17.6 kDa class I heat shock protein 3 OS=Arabidopsis thaliana GN=HSP17.6C PE=2 SV=2)

HSP 1 Score: 202.601 bits (514), Expect = 8.444e-52
Identity = 100/144 (69.44%), Postives = 116/144 (80.56%), Query Frame = 3
Query:   75 MSLIPSIFGGRRTNVFDPVSLDVWDPFDGFLS-SALTYAPSSARETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNGKVEQVKATMENGVLTIADPK 503
            MSLIPSIFGGRRTNVFDP SLDV+DPF+GFL+ S L  AP  A + + F NA++DW+ETP+AHVFKADLPGLR          G ILQISGERS E EEKNDKWHRVERSSGKF RRFRLP+N K+E++KA+MENGVL++  PK
Sbjct:    1 MSLIPSIFGGRRTNVFDPFSLDVFDPFEGFLTPSGLANAP--AMDVAAFTNAKVDWRETPEAHVFKADLPGLRKEEVKVEVEDGNILQISGERSNENEEKNDKWHRVERSSGKFTRRFRLPENAKMEEIKASMENGVLSVTVPK 142          
BLAST of CB610696 vs. ExPASy Swiss-Prot
Match: HSP11_DAUCA (17.8 kDa class I heat shock protein OS=Daucus carota PE=3 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 3.548e-50
Identity = 95/143 (66.43%), Postives = 110/143 (76.92%), Query Frame = 3
Query:   75 MSLIPSIFGGRRTNVFDPVSLDVWDPFDGFLSSALTYAPSSARETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNGKVEQVKATMENGVLTIADPK 503
            MS+IPS FGGRR+NVFDP SLDVWDPF  F     + A    +ET+ F N  IDWKETPQAHVFKADLPGL+          G++LQISGER+KE+EEKNDKWHRVERSSGKFLRRFRLP+N KV++VKA M NGV+T+  PK
Sbjct:    1 MSIIPSFFGGRRSNVFDPFSLDVWDPFKDF-PLVTSSASEFGKETAAFVNTHIDWKETPQAHVFKADLPGLKKEEVKVELEEGKVLQISGERNKEKEEKNDKWHRVERSSGKFLRRFRLPENAKVDEVKAAMANGVVTVTVPK 142          
BLAST of CB610696 vs. ExPASy Swiss-Prot
Match: HSP12_MEDSA (18.2 kDa class I heat shock protein OS=Medicago sativa GN=HSP18.2 PE=2 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 1.761e-49
Identity = 92/143 (64.34%), Postives = 110/143 (76.92%), Query Frame = 3
Query:   75 MSLIPSIFGGRRTNVFDPVSLDVWDPFDGFLSSALTYAPSSARETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNGKVEQVKATMENGVLTIADPK 503
            MSLIPS FGGRR+NVFDP SLDVWDPF  F  +    + S  RE S F + R+DWKETP+AHVFKADLPG++           R+LQISGERS E+E+KND+WHR+ERSSGKF+RRFRLP+N K++QVKA MENGVLT+  PK
Sbjct:    1 MSLIPSFFGGRRSNVFDPFSLDVWDPFKDFPFNNSALSASFPRENSAFVSTRVDWKETPEAHVFKADLPGMKKEEVKVEIEDDRVLQISGERSVEKEDKNDQWHRLERSSGKFMRRFRLPENAKMDQVKAAMENGVLTVTVPK 143          
BLAST of CB610696 vs. ExPASy Swiss-Prot
Match: HSP16_SOYBN (18.5 kDa class I heat shock protein OS=Glycine max GN=HSP18.5-C PE=3 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 6.691e-49
Identity = 96/148 (64.86%), Postives = 112/148 (75.68%), Query Frame = 3
Query:   75 MSLIPSIFGGRRTNVFDPVSLDVWDPFDGF-----LSSALTYAPSSARETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNGKVEQVKATMENGVLTIADPK 503
            MSLIP+ FGGRR NVFDP SLDVWDPF  F     LSSA    P  +RE S F + R+DWKETP+AHVFKAD+PGL+           ++LQISGER+ E+E+KND WHRVERSSGKF+RRFRLP+N KVEQVKA+MENGVLT+  PK
Sbjct:    1 MSLIPNFFGGRRNNVFDPFSLDVWDPFKDFPFPNTLSSASF--PEFSRENSAFVSTRVDWKETPEAHVFKADIPGLKKEEVKVQIEDDKVLQISGERNVEKEDKNDTWHRVERSSGKFMRRFRLPENAKVEQVKASMENGVLTVTVPK 146          
BLAST of CB610696 vs. ExPASy Swiss-Prot
Match: HSP13_SOYBN (17.5 kDa class I heat shock protein OS=Glycine max GN=HSP17.5-M PE=3 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 1.141e-48
Identity = 93/143 (65.03%), Postives = 109/143 (76.22%), Query Frame = 3
Query:   75 MSLIPSIFGGRRTNVFDPVSLDVWDPFDGFLSSALTYAPSSARETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNGKVEQVKATMENGVLTIADPK 503
            MSLIPSIFGGRR+NVFDP SLDVWDPF  F      +  S + E S F N R+DWKETP+AHVF+AD+PGL+           R+LQISGER+ E+E+KND WHRVERSSG F+RRFRLP+N KVEQVKA+MENGVLT+  PK
Sbjct:    1 MSLIPSIFGGRRSNVFDPFSLDVWDPFKDF-----HFPTSLSAENSAFVNTRVDWKETPEAHVFEADIPGLKKEEVKVQIEDDRVLQISGERNLEKEDKNDTWHRVERSSGNFMRRFRLPENAKVEQVKASMENGVLTVTVPK 138          
BLAST of CB610696 vs. ExPASy Swiss-Prot
Match: HSP11_PEA (18.1 kDa class I heat shock protein OS=Pisum sativum GN=HSP18.1 PE=2 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 3.321e-48
Identity = 92/143 (64.34%), Postives = 109/143 (76.22%), Query Frame = 3
Query:   75 MSLIPSIFGGRRTNVFDPVSLDVWDPFDGFLSSALTYAPSSARETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNGKVEQVKATMENGVLTIADPK 503
            MSLIPS F GRR+NVFDP SLDVWDP   F  S  + + S  RE   F + R+DWKETP+AHVFKADLPGL+           R+LQISGERS E+E+KND+WHRVERSSGKFLRRFRLP+N K+++VKA+MENGVLT+  PK
Sbjct:    1 MSLIPSFFSGRRSNVFDPFSLDVWDPLKDFPFSNSSPSASFPRENPAFVSTRVDWKETPEAHVFKADLPGLKKEEVKVEVEDDRVLQISGERSVEKEDKNDEWHRVERSSGKFLRRFRLPENAKMDKVKASMENGVLTVTVPK 143          
BLAST of CB610696 vs. ExPASy Swiss-Prot
Match: HSP11_SOYBN (17.3 kDa class I heat shock protein OS=Glycine max GN=HSP17.3-B PE=3 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 7.398e-48
Identity = 91/143 (63.64%), Postives = 109/143 (76.22%), Query Frame = 3
Query:   75 MSLIPSIFGGRRTNVFDPVSLDVWDPFDGFLSSALTYAPSSARETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNGKVEQVKATMENGVLTIADPK 503
            MSLIPS FGGRR++VFDP SLDVWDPF  F      +  S + E S F + R+DWKETP+AHVFKAD+PGL+          GR+LQISGER+ E+E+KND WHRVERSSGK +RRFRLP+N KV+QVKA+MENGVLT+  PK
Sbjct:    1 MSLIPSFFGGRRSSVFDPFSLDVWDPFKDF-----PFPSSLSAENSAFVSTRVDWKETPEAHVFKADIPGLKKEEVKLEIQDGRVLQISGERNVEKEDKNDTWHRVERSSGKLVRRFRLPENAKVDQVKASMENGVLTVTVPK 138          
BLAST of CB610696 vs. ExPASy Swiss-Prot
Match: HSP11_HELAN (17.6 kDa class I heat shock protein OS=Helianthus annuus GN=HSP17.6 PE=2 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 1.262e-47
Identity = 89/143 (62.24%), Postives = 108/143 (75.52%), Query Frame = 3
Query:   75 MSLIPSIFGGRRTNVFDPVSLDVWDPFDGFLSSALTYAPSSARETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNGKVEQVKATMENGVLTIADPK 503
            MS+IPS F  +R+N+FDP SLD WDPF G +S+        ARET+   NARIDWKETP+AHV KADLPG++          GR+LQISGER +EQEEK+D WHRVERSSGKF+RRFRLP+N K+++VKA MENGVLT+  PK
Sbjct:    1 MSIIPSFFTSKRSNIFDPFSLDTWDPFQGIIST------EPARETAAIVNARIDWKETPEAHVLKADLPGMKKEEVKVEVEDGRVLQISGERCREQEEKDDTWHRVERSSGKFIRRFRLPENAKMDEVKAMMENGVLTVVVPK 137          
The following BLAST results are available for this feature:
BLAST of CB610696 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 55
Match NameE-valueIdentityDescription
HS181_ARATH3.428e-5370.3418.1 kDa class I heat shock protein OS=Arabidopsis... [more]
HSP17_ARATH5.848e-5367.8317.4 kDa class I heat shock protein OS=Arabidopsis... [more]
HS17C_ARATH8.444e-5269.4417.6 kDa class I heat shock protein 3 OS=Arabidops... [more]
HSP11_DAUCA3.548e-5066.4317.8 kDa class I heat shock protein OS=Daucus caro... [more]
HSP12_MEDSA1.761e-4964.3418.2 kDa class I heat shock protein OS=Medicago sa... [more]
HSP16_SOYBN6.691e-4964.8618.5 kDa class I heat shock protein OS=Glycine max... [more]
HSP13_SOYBN1.141e-4865.0317.5 kDa class I heat shock protein OS=Glycine max... [more]
HSP11_PEA3.321e-4864.3418.1 kDa class I heat shock protein OS=Pisum sativ... [more]
HSP11_SOYBN7.398e-4863.6417.3 kDa class I heat shock protein OS=Glycine max... [more]
HSP11_HELAN1.262e-4762.2417.6 kDa class I heat shock protein OS=Helianthus ... [more]

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Properties
Property NameValue
Genbank descriptionALBEDO0003_IIIaF_B11 Mature Albedo Citrus sinensis cDNA clone ALBEDO0003_IIIaF_B11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB610696 ID=CB610696; Name=CB610696; organism=Citrus sinensis; type=EST; length=504bp
GGGGATCTTCAAATTGATTGATCAAAGCATTTCCGAAGTTGTTGAGCATT
TAATTAGCGTCCCAGTTTGCCATAATGTCACTCATTCCAAGCATCTTCGG
TGGCCGAAGAACCAACGTGTTCGATCCAGTTTCATTAGATGTATGGGATC
CTTTCGACGGGTTCTTGTCCTCTGCCCTTACCTACGCGCCGTCTTCGGCT
AGGGAAACATCCCAATTCGCCAATGCAAGAATTGACTGGAAAGAGACTCC
TCAGGCTCACGTATTCAAAGCTGATCTTCCAGGGCTGAGGAAAGAAGAAG
TAAAAGTTGAGGTTGTAGAGGGCAGGATTCTGCAGATAAGCGGAGAGAGG
AGCAAGGAGCAGGAAGAGAAGAATGACAAGTGGCATCGCGTCGAGAGGAG
CAGTGGCAAGTTCCTGAGGAGGTTCAGGTTGCCCGACAATGGTAAGGTGG
AACAGGTTAAGGCCACCATGGAGAATGGTGTGCTCACAATCGCCGATCCT
AAAC
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