CB610739

Overview
NameCB610739
Unique NameCB610739
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length786
Libraries
Library NameType
Mature Albedocdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12567 contig Csv1_Contig12567:39..827. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB610739 vs. ExPASy Swiss-Prot
Match: THI4_CITSI (Thiazole biosynthetic enzyme, chloroplastic OS=Citrus sinensis GN=THI1 PE=2 SV=1)

HSP 1 Score: 413.305 bits (1061), Expect = 7.623e-115
Identity = 208/219 (94.98%), Postives = 210/219 (95.89%), Query Frame = 1
Query:  127 PSVSSTTNKLFDSSFHGAPMSPSLLRLQPIKSSRPNNLSISASASPPYDLNTFKFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAIAAEDLIVKGGRIGGVXNNWALVSMNXDTQSXXDPNVM 783
            PSVSSTTNKLFDSSFHGAPMSPSLLRLQPIKSSRPNNLSISASASPPYDLNTFKFDPIKESIVSREMTRRYMTDMITYADTD    GAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAALFTSTIMSKLLARPNVKLFNA+AAEDLIVKGGR+GGV  NWALVSMN DTQS  DPNVM
Sbjct:   11 PSVSSTTNKLFDSSFHGAPMSPSLLRLQPIKSSRPNNLSISASASPPYDLNTFKFDPIKESIVSREMTRRYMTDMITYADTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVM 229          
BLAST of CB610739 vs. ExPASy Swiss-Prot
Match: THI4_ALNGL (Thiazole biosynthetic enzyme, chloroplastic OS=Alnus glutinosa GN=THI4 PE=2 SV=1)

HSP 1 Score: 333.183 bits (853), Expect = 1.002e-90
Identity = 164/207 (79.23%), Postives = 182/207 (87.92%), Query Frame = 1
Query:  163 SSFHGAPMSPSLLRLQPIKSSRPNNLSISASASPPYDLNTFKFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAIAAEDLIVKGGRIGGVXNNWALVSMNXDTQSXXDPNVM 783
            SSF+G P++PS +R+QP K+    ++S+S + SPPYDL  F FDPIKESIVSREMTRRYM DMITYADTD    GAGS+GL C YELSKNP++Q+AIIEQSVSPGGGAWLGGQLFS MVVRKPAH+FLDELGI+YDEQDNYVVIKHAALFTSTIMSKLLARPNVKLFNA+AAEDLIVKGGR+GGV  NWALVSMN DTQS  DPNVM
Sbjct:   20 SSFYGTPLAPSSIRVQPTKAGAKPSISMSGAPSPPYDLKAFTFDPIKESIVSREMTRRYMMDMITYADTDVVVVGAGSSGLVC-YELSKNPSVQVAIIEQSVSPGGGAWLGGQLFSGMVVRKPAHLFLDELGIEYDEQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVM 225          
BLAST of CB610739 vs. ExPASy Swiss-Prot
Match: THI4_ARATH (Thiazole biosynthetic enzyme, chloroplastic OS=Arabidopsis thaliana GN=THI1 PE=1 SV=1)

HSP 1 Score: 313.923 bits (803), Expect = 6.294e-85
Identity = 159/219 (72.60%), Postives = 183/219 (83.56%), Query Frame = 1
Query:  130 SVSSTT-NKLFDSSFHGAPMSPSLLRLQPIKSSRPNNLSISASASPPYDLNTFKFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAIAAEDLIVKGGRIGGVXNNWALVSMNXDTQSXXDPNVM 783
            S+SST   +LFDSSFHG+ +S + + +      +P + S+ A+ +  YDLN F FDPIKESIVSREMTRRYMTDMITYA+TD    GAGSAGLS AYE+SKNPN+Q+AIIEQSVSPGGGAWLGGQLFSAM+VRKPAH+FLDE+G+ YDEQD YVV+KHAALFTSTIMSKLLARPNVKLFNA+AAEDLIVKG R+GGV  NWALV+ N  TQS  DPNVM
Sbjct:    9 SLSSTKPQRLFDSSFHGSAISAAPISI----GLKPRSFSVRATTAG-YDLNAFTFDPIKESIVSREMTRRYMTDMITYAETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVAYDEQDTYVVVKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGNRVGGVVTNWALVAQNHHTQSCMDPNVM 222          
BLAST of CB610739 vs. ExPASy Swiss-Prot
Match: THI41_MAIZE (Thiazole biosynthetic enzyme 1-1, chloroplastic OS=Zea mays GN=THI1-1 PE=2 SV=1)

HSP 1 Score: 301.597 bits (771), Expect = 3.232e-81
Identity = 157/227 (69.16%), Postives = 179/227 (78.85%), Query Frame = 1
Query:  136 SSTTNKLFDSSFHGAPMSPSLLRLQPIK----------SSRPNNLSISASAS-PPYDLNTFKFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAIAAEDLIVKGGRIGGVXNNWALVSMNXDTQSXXDPNVM 783
            ++  + L  SSF G+ + P+  R  P             + P   S+S S+S PPYDL +F+F PIKESIVSREMTRRYMTDMITYADTD    GAGSAGLSCAYELSK+P + IAI+EQSVSPGGGAWLGGQLFSAMVVRKPAH+FLDELG+ YDE ++YVVIKHAALFTST+MS LLARPNVKLFNA+A EDLIV+GGR+GGV  NWALVSMN DTQS  DPNVM
Sbjct:    3 TAAASSLLKSSFAGSRL-PAATRTTPASLVVATGPRGAGAGPICASMSMSSSNPPYDLTSFRFSPIKESIVSREMTRRYMTDMITYADTDVVIVGAGSAGLSCAYELSKDPAVSIAIVEQSVSPGGGAWLGGQLFSAMVVRKPAHLFLDELGVAYDEAEDYVVIKHAALFTSTVMSLLLARPNVKLFNAVAVEDLIVRGGRVGGVVTNWALVSMNHDTQSCMDPNVM 228          
BLAST of CB610739 vs. ExPASy Swiss-Prot
Match: THI42_MAIZE (Thiazole biosynthetic enzyme 1-2, chloroplastic OS=Zea mays GN=THI1-2 PE=2 SV=1)

HSP 1 Score: 298.13 bits (762), Expect = 3.574e-80
Identity = 153/225 (68.00%), Postives = 177/225 (78.67%), Query Frame = 1
Query:  136 SSTTNKLFDSSFHGAPMSPSLLRLQ---------PIKSSRPNNLSISASASPPYDLNTFKFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAIAAEDLIVKGGRIGGVXNNWALVSMNXDTQSXXDPNVM 783
            ++  + L  SSF G+ + PS  R           P     P   SIS S +PPYDL +F+F PIKESIVSREMTRRYMTDMIT+ADTD    GAGSAGLSCAYELSK+P + +AI+EQSVSPGGGAWLGGQLFSAMVVR+PAH+FLDELG+ YDE ++YVV+KHAALFTST+MS+LLARPNVKLFNA+A EDLIV+ GR+GGV  NWALVSMN DTQS  DPNVM
Sbjct:    3 TTAASSLLKSSFAGSRL-PSATRTTTPSSVAVATPRAGGGPIRASIS-SPNPPYDLTSFRFSPIKESIVSREMTRRYMTDMITHADTDVVIVGAGSAGLSCAYELSKDPTVSVAIVEQSVSPGGGAWLGGQLFSAMVVRRPAHLFLDELGVGYDEAEDYVVVKHAALFTSTVMSRLLARPNVKLFNAVAVEDLIVRRGRVGGVVTNWALVSMNHDTQSCMDPNVM 225          
BLAST of CB610739 vs. ExPASy Swiss-Prot
Match: THI2_SCHPO (Thiazole biosynthetic enzyme, mitochondrial OS=Schizosaccharomyces pombe GN=thi2 PE=2 SV=2)

HSP 1 Score: 216.468 bits (550), Expect = 1.368e-55
Identity = 111/185 (60.00%), Postives = 141/185 (76.22%), Query Frame = 1
Query:  250 ASASPPYDLN-TFKFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYEL-SKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAIAAEDLIVKGG-----RIGGVXNNWALVSMNXDTQSXXDPNVM 783
            + A P Y L+ +F F PI+ES VSR MTRRY +D+  YA++D    GAGSAGL+ AY + ++ P+++IAIIE SV+PGGGAWLGGQLFSAMVVRKPA +FL+E+G+ Y+++ +YVV+KHAALFTST+M++ LA PNVKLFNA A EDLIVK G     RI GV  NW LVS+N   QS  DPN +
Sbjct:   37 SKAYPTYSLDESFSFAPIRESTVSRAMTRRYFSDLDKYAESDIVIVGAGSAGLTAAYYIGTRRPDLKIAIIEASVAPGGGAWLGGQLFSAMVVRKPADLFLNEIGVPYEDEGDYVVVKHAALFTSTVMARTLALPNVKLFNATAVEDLIVKEGKDGKQRIAGVVTNWTLVSLNHGLQSCMDPNTI 221          
BLAST of CB610739 vs. ExPASy Swiss-Prot
Match: THI4_FUSOX (Thiazole biosynthetic enzyme, mitochondrial OS=Fusarium oxysporum GN=STI35 PE=2 SV=2)

HSP 1 Score: 212.231 bits (539), Expect = 2.579e-54
Identity = 109/172 (63.37%), Postives = 129/172 (75.00%), Query Frame = 1
Query:  283 FKFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKN-PNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAIAAEDLIVK----GGRIGGVXNNWALVSMNXDTQSXXDPNVM 783
            FKF PI+ES VSR MTRRY  D+  YA++D    GAGS GLS AY L K  P+++IAIIE SVSPGGGAWLGGQLFSAM++RKPA  FL E+G+ Y+++ NYVV+KHAALFTSTIMSK+L  PN+KLFNA   EDLI +    G RI GV  NW LVSM+ D QS  DPN +
Sbjct:   44 FKFAPIRESQVSRAMTRRYFQDLDNYAESDIVIIGAGSCGLSAAYILGKKRPDLKIAIIEASVSPGGGAWLGGQLFSAMIMRKPADAFLREVGVPYEDEGNYVVVKHAALFTSTIMSKVLQMPNIKLFNATCVEDLITRPSEEGVRIAGVVTNWTLVSMHHDDQSCMDPNTI 215          
BLAST of CB610739 vs. ExPASy Swiss-Prot
Match: THI4_FUSSH (Thiazole biosynthetic enzyme, mitochondrial OS=Fusarium solani subsp. phaseoli GN=STI35 PE=2 SV=1)

HSP 1 Score: 208.379 bits (529), Expect = 3.724e-53
Identity = 109/172 (63.37%), Postives = 127/172 (73.84%), Query Frame = 1
Query:  283 FKFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKN-PNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAIAAEDLIVK----GGRIGGVXNNWALVSMNXDTQSXXDPNVM 783
            FKF PI+ES VSR MTRRY  D+  YA++D    GAGS GLS  Y L K  P+++IAIIE SVSPGGGAWLGGQLFSAMV+RKPA  FL E+G+ Y+++ NYVV+KHAALFTSTIMSK+L  PN KLFNA   EDLI +    G RI GV  NW LVSM+ D QS  DPN +
Sbjct:   48 FKFAPIRESQVSRAMTRRYFQDLDNYAESDIVIVGAGSCGLSTRYILGKKRPDLKIAIIEASVSPGGGAWLGGQLFSAMVMRKPADAFLREVGVPYEDEGNYVVVKHAALFTSTIMSKVLQLPNCKLFNATCVEDLITRPSKEGVRISGVVTNWTLVSMHHDDQSCMDPNTI 219          
BLAST of CB610739 vs. ExPASy Swiss-Prot
Match: THI4_UROFA (Thiazole biosynthetic enzyme, mitochondrial OS=Uromyces fabae GN=THI2 PE=3 SV=1)

HSP 1 Score: 203.371 bits (516), Expect = 1.198e-51
Identity = 106/204 (51.96%), Postives = 138/204 (67.65%), Query Frame = 1
Query:  205 LQPIKSSRPNNLSISASA---SPPYDLNTFKFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYEL-SKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAIAAEDLIVKG-------GRIGGVXNNWALVSMNXDTQSXXDPNVM 783
            + P+KS + +N +++  A    P  +L   KF PIKE  V R M RRY  DM   A +D    GAGSAGLSCAY L +  P+++I I+E +V+PGGG WLGGQL SAMV RKPA  FLD++G+ Y+++ N+VV+KHAALFTST++SK+LA PNVK+FNA A EDLI+K         RI G   NW LVS+N D QS  DP+ +
Sbjct:   24 MDPLKSKQQSNATVNKPAFKPEPAVNLTPIKFAPIKEHQVQRAMVRRYFQDMEERAISDVIIVGAGSAGLSCAYALGTARPDLKITILESNVAPGGGCWLGGQLMSAMVCRKPADEFLDQVGVPYEDEGNFVVVKHAALFTSTVLSKVLAMPNVKMFNATACEDLIIKPCPINPGVQRIAGCVTNWTLVSLNHDHQSCMDPSTI 227          
BLAST of CB610739 vs. ExPASy Swiss-Prot
Match: THI4_ASPOR (Thiazole biosynthetic enzyme, mitochondrial OS=Aspergillus oryzae GN=thiA PE=3 SV=2)

HSP 1 Score: 201.445 bits (511), Expect = 4.553e-51
Identity = 105/175 (60.00%), Postives = 131/175 (74.86%), Query Frame = 1
Query:  283 FKFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSK-NPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDE--QDNYVVIKHAALFTSTIMSKLLARPNVKLFNAIAAEDLIVK-----GGRIGGVXNNWALVSMNXDTQSXXDPNVM 783
            FKF PI+ES VSR MTRRY  D+  YA++D    GAGS GLS AY L+K  P+++IAI+E SVSPGGGAWLGGQLFSAMV+R+PA +FL+ELG+ Y+E    NYVV+KHA+LFTST+MSK+L+ PNVKLFNA A EDLI +       +I GV  NW LV+++ D  S  DPN +
Sbjct:   48 FKFAPIRESQVSRAMTRRYFEDLDKYAESDVVIVGAGSCGLSTAYVLAKARPDLKIAIVEASVSPGGGAWLGGQLFSAMVMRRPAEVFLNELGVPYEEDANPNYVVVKHASLFTSTLMSKVLSFPNVKLFNATAVEDLITRPTENGNPQIAGVVVNWTLVTLHHDDHSCMDPNTI 222          
The following BLAST results are available for this feature:
BLAST of CB610739 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 40
Match NameE-valueIdentityDescription
THI4_CITSI7.623e-11594.98Thiazole biosynthetic enzyme, chloroplastic OS=Cit... [more]
THI4_ALNGL1.002e-9079.23Thiazole biosynthetic enzyme, chloroplastic OS=Aln... [more]
THI4_ARATH6.294e-8572.60Thiazole biosynthetic enzyme, chloroplastic OS=Ara... [more]
THI41_MAIZE3.232e-8169.16Thiazole biosynthetic enzyme 1-1, chloroplastic OS... [more]
THI42_MAIZE3.574e-8068.00Thiazole biosynthetic enzyme 1-2, chloroplastic OS... [more]
THI2_SCHPO1.368e-5560.00Thiazole biosynthetic enzyme, mitochondrial OS=Sch... [more]
THI4_FUSOX2.579e-5463.37Thiazole biosynthetic enzyme, mitochondrial OS=Fus... [more]
THI4_FUSSH3.724e-5363.37Thiazole biosynthetic enzyme, mitochondrial OS=Fus... [more]
THI4_UROFA1.198e-5151.96Thiazole biosynthetic enzyme, mitochondrial OS=Uro... [more]
THI4_ASPOR4.553e-5160.00Thiazole biosynthetic enzyme, mitochondrial OS=Asp... [more]

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Properties
Property NameValue
Genbank descriptionALBEDO0002_IaF_D09 Mature Albedo Citrus sinensis cDNA clone ALBEDO0002_IaF_D09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB610739 ID=CB610739; Name=CB610739; organism=Citrus sinensis; type=EST; length=786bp
GGGGGTGACTCACCAGCCATCATCACTGCTGCAAATCAAATTACTTCTCA
TTATCAAACTTCTAAGCAGCAGGGGAAGGAGGGGTAAAAAAAAACCATGG
CAGCCATGGCTTCTACAGCTTTCGCTCCTTCAGTTTCGTCCACCACCAAT
AAGCTCTTTGACTCATCCTTTCATGGGGCTCCCATGTCACCTTCTCTTCT
ACGTCTTCAACCCATCAAATCTTCTCGTCCCAACAACTTGTCCATTTCTG
CTTCTGCTTCTCCTCCTTATGACTTGAACACTTTCAAGTTTGACCCCATC
AAAGAATCCATTGTTTCTCGTGAAATGACACGCAGGTACATGACGGACAT
GATCACTTATGCTGACACTGATGTGGTAGTGGTTGGTGCTGGCTCTGCTG
GCCTCTCTTGTGCTTATGAGCTCAGCAAAAACCCCAACATTCAGATTGCT
ATTATCGAACAGTCTGTTAGCCCCGGCGGTGGCGCGTGGCTCGGTGGACA
GCTCTTCTCTGCCATGGTTGTGCGCAAACCAGCCCACATCTTCCTTGACG
AGCTTGGCATCGACTACGATGAGCAAGACAACTATGTTGTGATCAAGCAT
GCAGCGCTGTTCACCTCCACTATAATGAGCAAGCTCCTGGCCCGCCCCAA
CGTCAAGCTCTTTAATGCGATCGCAGCCGAGGACTTGATAGTCAAAGGCG
GCAGAATTGGTGGTGTGGNNAACAACTGGGCGTTGGTGTCAATGAATNNC
GATACACAGTCTTGNNTGGATCCCAATGTAATGATC
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