CB610841
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB610841 vs. ExPASy Swiss-Prot
Match: HDDC2_MOUSE (HD domain-containing protein 2 OS=Mus musculus GN=Hddc2 PE=2 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 8.927e-22 Identity = 58/124 (46.77%), Postives = 80/124 (64.52%), Query Frame = 1 Query: 4 AIVHDIAEAIVGDITPSDGVPKEVKSRMEQEALNEMCKVLGGGMRAEEIQELWAEYENNASIEANLVKDFDKVEMILQALEYEMEHGKV--LDEFFLSTAGKFQTEIGKCWAAEINSRRNSRLA 369 A+VHD+AE IVGDI P+D +PKE K R E+EA+ ++ ++L +R +E+ ELW EYE +S EA VK D+ EMILQA EYE K L +F+ STAGKF +E+ + RN+ +A Sbjct: 69 ALVHDMAECIVGDIAPADNIPKEEKHRREEEAMKQITQLLPEDLR-KELYELWEEYETQSSEEAKFVKQLDQCEMILQASEYEDLENKPGRLQDFYDSTAGKFSHPEIVQLVSELETERNASMA 191
BLAST of CB610841 vs. ExPASy Swiss-Prot
Match: HDDC2_HUMAN (HD domain-containing protein 2 OS=Homo sapiens GN=HDDC2 PE=1 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 8.927e-22 Identity = 59/125 (47.20%), Postives = 84/125 (67.20%), Query Frame = 1 Query: 4 AIVHDIAEAIVGDITPSDGVPKEVKSRMEQEALNEMCKVLGGGMRAEEIQELWAEYENNASIEANLVKDFDKVEMILQALEYE-MEH--GKVLDEFFLSTAGKFQTEIGKCWAAEINSRRNSRLA 369 A+VHD+AE IVGDI P+D +PKE K R E+EA+ ++ ++L +R +E+ ELW EYE +S EA VK D+ EMILQA EYE +EH G+ L +F+ STAGKF +E+ + R++ +A Sbjct: 74 ALVHDMAECIVGDIAPADNIPKEEKHRREEEAMKQITQLLPEDLR-KELYELWEEYETQSSAEAKFVKQLDQCEMILQASEYEDLEHKPGR-LQDFYDSTAGKFNHPEIVQLVSELEAERSTNIA 196
BLAST of CB610841 vs. ExPASy Swiss-Prot
Match: HDDC2_BOVIN (HD domain-containing protein 2 OS=Bos taurus GN=HDDC2 PE=2 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 8.927e-22 Identity = 58/128 (45.31%), Postives = 81/128 (63.28%), Query Frame = 1 Query: 4 AIVHDIAEAIVGDITPSDGVPKEVKSRMEQEALNEMCKVLGGGMRAEEIQELWAEYENNASIEANLVKDFDKVEMILQALEYEMEHGKV--LDEFFLSTAGKFQTEIGKCWAAEINSRRNSRLANKLS 381 A+VHD+AE IVGDI P+D VP+E K R E+EA+ ++ ++L ++ +E+ ELW EYE +S EA VK D+ EMILQA EYE K L +F+ STAGKF +E+ + RN+ +A S Sbjct: 75 ALVHDMAECIVGDIAPADNVPREEKHRREEEAMKQLTQLLPEDLQ-KELYELWEEYETQSSAEAKFVKQLDQCEMILQASEYEDLENKPGRLQDFYDSTAGKFSHPEIVQLVSELEAERNANIAGAAS 201
BLAST of CB610841 vs. ExPASy Swiss-Prot
Match: HDDC2_DANRE (HD domain-containing protein 2 OS=Danio rerio GN=hddc2 PE=2 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 1.289e-20 Identity = 55/103 (53.40%), Postives = 70/103 (67.96%), Query Frame = 1 Query: 4 AIVHDIAEAIVGDITPSDGVPKEVKSRMEQEALNEMCKVLGGGMRAEEIQELWAEYENNASIEANLVKDFDKVEMILQALEYEMEHGKV--LDEFFLSTAGKF 306 A+VHD+AE IVGDI P+D V K K R E++A+ + +L G+R +EI LW EYE +S EA LVK+ D +EMI+QA EYE GK L EFF+ST GKF Sbjct: 61 ALVHDLAECIVGDIAPADNVSKAEKHRREKDAMVHITGLLDDGLR-KEIYNLWEEYETQSSPEAKLVKELDNLEMIIQAHEYEELEGKPGRLQEFFVSTEGKF 162
BLAST of CB610841 vs. ExPASy Swiss-Prot
Match: HDDC2_DICDI (HD domain-containing protein 2 homolog OS=Dictyostelium discoideum GN=hddc2 PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 3.751e-20 Identity = 57/122 (46.72%), Postives = 77/122 (63.11%), Query Frame = 1 Query: 4 AIVHDIAEAIVGDITPSDGVPKEVKSRMEQEALNEMCKVLGGGMRAEEIQELWAEYENNASIEANLVKDFDKVEMILQALEYE-----MEHGKVLDEFFLSTAGKFQTEIGKCWAAEINSRR 354 A+VHD+ E++VGD TP D + KE K ++E+ A+ E+ L G + +EI +LW EYE+ + EA LVKDFDK EMILQA EYE +E+ L FF ST GKF + K A ++ S R Sbjct: 69 ALVHDLGESLVGDFTPHDKITKEEKYQLEKNAIIEITNTLSGEV-GKEIFDLWQEYEDCKTNEALLVKDFDKFEMILQAYEYEKQPHQLENKIKLQSFFDSTRGKFHHPLFKSLALQLESDR 189
BLAST of CB610841 vs. ExPASy Swiss-Prot
Match: HDDC2_XENLA (HD domain-containing protein 2 OS=Xenopus laevis GN=hddc2 PE=2 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 2.431e-19 Identity = 54/124 (43.55%), Postives = 77/124 (62.10%), Query Frame = 1 Query: 4 AIVHDIAEAIVGDITPSDGVPKEVKSRMEQEALNEMCKVLGGGMRAEEIQELWAEYENNASIEANLVKDFDKVEMILQALEYEMEHGKV--LDEFFLSTAGKFQTEIGKCWAAEINSRRNSRLA 369 A+VHD+AE IVGDI P+D + KE K R E+ A+ + ++L ++ E+ +LW EYE+ + EA VK+ D+ EMILQALEYE + L +F+ STAGKF+ + I RNS +A Sbjct: 71 ALVHDMAECIVGDIAPADNIAKEEKHRKEKAAMEHLTQLLPDNLKT-EVYDLWEEYEHQFTAEAKFVKELDQCEMILQALEYEELEKRPGRLQDFYNSTAGKFKHPEIVQLVSAIYEERNSAIA 193
BLAST of CB610841 vs. ExPASy Swiss-Prot
Match: YB92_YEAST (HD domain-containing protein YBR242W OS=Saccharomyces cerevisiae GN=YBR242W PE=1 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.576e-18 Identity = 54/128 (42.19%), Postives = 76/128 (59.38%), Query Frame = 1 Query: 4 AIVHDIAEAIVGDITPSDGVPKEVKSRMEQEALNEMCKVL---GGGMRAEEIQELWAEYENNASIEANLVKDFDKVEMILQALEYEMEH--GKVLDEFFLSTAGKFQTEIGKCWAAEINSRRNSRLAN 372 A+VHDIAE++VGDITP D + KE K R E E + +C L + A+EI + W YEN S+EA VKD DK EM++Q EYE E+ K D+FF + A +T+ K W +++ +R A+ Sbjct: 105 ALVHDIAESLVGDITPVDPIGKEEKHRREWETIKYLCNALIKPYNEIAAKEIMDDWLAYENVTSLEARYVKDIDKYEMLVQCFEYEREYKGTKNFDDFFGAVA-SIKTDEVKGWTSDLVVQRQKYFAD 231
BLAST of CB610841 vs. ExPASy Swiss-Prot
Match: YC0H_SCHPO (HD domain-containing protein C4G3.17 OS=Schizosaccharomyces pombe GN=SPCC4G3.17 PE=2 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 2.275e-17 Identity = 54/121 (44.63%), Postives = 73/121 (60.33%), Query Frame = 1 Query: 4 AIVHDIAEAIVGDITPSDGVPKEVKSRMEQEALNEMCKVL---GGGMRAEEIQELWAEYENNASIEANLVKDFDKVEMILQALEYEMEHGKVLDEFFLSTAGK-FQTEIGKCWAAEINSRR 354 A+VHD+AE+IVGDITP + V KE K RME EA+ + + L ++AEEI+EL+ EYE+ ++ EA VKD DK EMI Q EYE + D + AGK Q + K W ++ R Sbjct: 66 AVVHDMAESIVGDITPHENVSKEEKHRMESEAMVSITQQLIPLNLSLQAEEIKELFLEYESASTPEAKFVKDIDKFEMIAQMFEYERKFNGEKDLSQFTWAGKLIQHPLVKGWLNDVLQER 186
BLAST of CB610841 vs. ExPASy Swiss-Prot
Match: YGK1_YEAST (HD domain-containing protein YGL101W OS=Saccharomyces cerevisiae GN=YGL101W PE=1 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 4.017e-14 Identity = 45/123 (36.59%), Postives = 66/123 (53.66%), Query Frame = 1 Query: 4 AIVHDIAEAIVGDITPSDGVPKEVKSRMEQEALNEMCKVL---GGGMRAEEIQELWAEYENNASIEANLVKDFDKVEMILQALEYEMEH-GKVLDEFFLSTAGKFQTEIGKCWAAEINSRRNS 360 A+VHD AE++VGDITP+D + KE K R E E + +C+ + + EI + W YE +E VKD DK EM++Q EYE ++ GK + FL +T+ K W + R + Sbjct: 86 ALVHDFAESLVGDITPNDPMTKEEKHRREFETVKYLCESIIRPCSESASREILDDWLAYEKQTCLEGRYVKDIDKYEMLVQCFEYEQKYNGKKDLKQFLGAINDIKTDEVKKWTQSLLEDRQA 208 The following BLAST results are available for this feature:
BLAST of CB610841 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 9
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CB610841 ID=CB610841; Name=CB610841; organism=Citrus sinensis; type=EST; length=872bpback to top |