CB610847

Overview
NameCB610847
Unique NameCB610847
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length740
Libraries
Library NameType
Mature Albedocdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig412 contig Csv1_Contig412:1..740. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB610847 vs. ExPASy Swiss-Prot
Match: YCF45_PORPU (Uncharacterized protein ycf45 OS=Porphyra purpurea GN=ycf45 PE=3 SV=1)

HSP 1 Score: 231.876 bits (590), Expect = 2.836e-60
Identity = 115/180 (63.89%), Postives = 142/180 (78.89%), Query Frame = 3
Query:  180 REIARMLADDHMKRVVIVDTSNEIGGDGDVPHSGIGRARRMQVPNVNMQHSVMIEAVENHMPETIIIDEIGTELEALAASTIAQRGVQLVGTAHGMTIDNIVKNPSLQILVGGIESVTLGDEEAKKRKVQKTILERKGPPTFTCAVEMISRTECRVHHRLDATVDAILSGELPLFEVRQM 719
            REIAR+L+D+  KRVVI+DTSNEI GDGD+PH  IGRARRMQV   ++QH VMIEAVENHMPE IIIDEIGTELEALAA TIA+RGVQLVGTAHG  +++++KNP+L  L+GGI+ VTLGD+EAK+R  QK+ILERK  P F  A+E+  R    VH +++ T+D IL G  P  + RQ+
Sbjct:  141 REIARVLSDEMEKRVVIIDTSNEIAGDGDIPHPAIGRARRMQVAQPDLQHQVMIEAVENHMPEVIIIDEIGTELEALAARTIAERGVQLVGTAHGNYLESLIKNPTLADLIGGIQYVTLGDDEAKRRGTQKSILERKAAPAFQIAIEIHDRKAWIVHEKVEETIDQILQGHQPFVQKRQI 320          
BLAST of CB610847 vs. ExPASy Swiss-Prot
Match: YCF45_ODOSI (Uncharacterized protein ycf45 OS=Odontella sinensis GN=ycf45 PE=3 SV=1)

HSP 1 Score: 218.009 bits (554), Expect = 4.238e-56
Identity = 105/180 (58.33%), Postives = 138/180 (76.67%), Query Frame = 3
Query:  180 REIARMLADDHMKRVVIVDTSNEIGGDGDVPHSGIGRARRMQVPNVNMQHSVMIEAVENHMPETIIIDEIGTELEALAASTIAQRGVQLVGTAHGMTIDNIVKNPSLQILVGGIESVTLGDEEAKKRKVQKTILERKGPPTFTCAVEMISRTECRVHHRLDATVDAILSGELPLFEVRQM 719
            REIAR+L+D+  KRVVIVDTSNEI GD D+PHS IGRARRMQV   ++QH +MIEAVENHMP+ I+IDEIGTELEALAA TIA++GVQLVGT HG  ++N++KNP L  L+GGI+SVTL D+EAK+R  QK+I+ERK  P F  A+E+ +     +H  + +++D +L       +VR++
Sbjct:  141 REIARVLSDEMEKRVVIVDTSNEIAGDSDIPHSAIGRARRMQVATTDLQHQIMIEAVENHMPQVIVIDEIGTELEALAARTIAEKGVQLVGTTHGNCLENLIKNPPLSDLIGGIQSVTLSDDEAKRRGTQKSIIERKAYPAFQIAIEINTENSWTIHEDIKSSIDLLLRKSFTGTQVREL 320          
BLAST of CB610847 vs. ExPASy Swiss-Prot
Match: YCF45_CYACA (Uncharacterized protein ycf45 OS=Cyanidium caldarium GN=ycf45 PE=3 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 2.491e-48
Identity = 95/180 (52.78%), Postives = 133/180 (73.89%), Query Frame = 3
Query:  180 REIARMLADDHMKRVVIVDTSNEIGGDGDVPHSGIGRARRMQVPNVNMQHSVMIEAVENHMPETIIIDEIGTELEALAASTIAQRGVQLVGTAHGMTIDNIVKNPSLQILVGGIESVTLGDEEAKKRKVQKTILERKGPPTFTCAVEMISRTECRVHHRLDATVDAILSGELPLFEVRQM 719
            REI+R+L+++ MKRV+IVD++NEI G+G  PH   G+ARRM+V ++N QH VMIEA+ENH PE IIIDEIGTE E+ AA +I+QRG++L+G+AH   + N+ KNP+L  LVGGIESVTL D +A  RK +KTILERKG   F   +E+  +   +V+  ++ ++DAIL G +   ++R M
Sbjct:  141 REISRILSNEIMKRVIIVDSANEISGEGCCPHISTGKARRMEVQSINSQHEVMIEAIENHTPEIIIIDEIGTEYESQAAISISQRGIRLIGSAHSSDLFNLAKNPTLCKLVGGIESVTLSDTQAILRKTKKTILERKGCSCFNATIEINKKRTVKVYTSVEQSIDAILEGRVNNSQIRSM 320          
The following BLAST results are available for this feature:
BLAST of CB610847 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
YCF45_PORPU2.836e-6063.89Uncharacterized protein ycf45 OS=Porphyra purpurea... [more]
YCF45_ODOSI4.238e-5658.33Uncharacterized protein ycf45 OS=Odontella sinensi... [more]
YCF45_CYACA2.491e-4852.78Uncharacterized protein ycf45 OS=Cyanidium caldari... [more]
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Properties
Property NameValue
Genbank descriptionALBEDO0002_IIaF_G08 Mature Albedo Citrus sinensis cDNA clone ALBEDO0002_IIaF_G08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB610847 ID=CB610847; Name=CB610847; organism=Citrus sinensis; type=EST; length=740bp
GGGTATGCTATGTTTGCTTTTATTCTTAAATTTCAGAAGGCGTAGATCTT
GTAACTTGATCAAGTTTTGGAATGGGAAGAAAAGAAGAAATGAGAATGAA
TTGATGTTAACTTAAGTACTCTATAATTCACATGTTTCATATCACACTGT
TTATAAACCTGAAGAGTCTTTGTTTGAGCAGAGAAATAGCAAGAATGTTG
GCTGATGACCACATGAAGCGTGTAGTCATTGTAGACACATCAAATGAGAT
TGGAGGTGATGGAGATGTCCCTCATTCGGGAATAGGTCGTGCTAGAAGGA
TGCAAGTTCCTAATGTTAACATGCAACATAGTGTTATGATCGAAGCAGTC
GAAAATCATATGCCTGAGACCATCATAATCGATGAAATTGGAACAGAGCT
TGAAGCTTTAGCTGCCAGTACTATTGCTCAACGTGGAGTTCAGTTAGTTG
GAACAGCTCATGGAATGACTATAGATAACATAGTTAAAAATCCTTCTCTG
CAGATCCTTGTTGGGGGCATAGAGAGTGTAACTCTTGGTGACGAGGAAGC
AAAGAAAAGGAAAGTGCAGAAGACAATTCTTGAAAGGAAAGGGCCTCCTA
CTTTTACATGTGCGGTTGAGATGATATCTAGGACTGAATGTCGTGTTCAT
CACAGATTAGATGCAACAGTAGATGCTATACTATCAGGAGAATTGCCACT
GTTTGAAGTCCGCCAAATGGATGCTGAACTTCATGAACCT
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