CB610911

Overview
NameCB610911
Unique NameCB610911
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length394
Libraries
Library NameType
Mature Albedocdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CB610911 vs. ExPASy Swiss-Prot
Match: AL7B4_ARATH (Aldehyde dehydrogenase family 7 member B4 OS=Arabidopsis thaliana GN=ALDH7B4 PE=2 SV=3)

HSP 1 Score: 56.6102 bits (135), Expect = 2.379e-13
Identity = 29/47 (61.70%), Postives = 29/47 (61.70%), Query Frame = 1 
Query:    4 GSDTGIVNVNIPTNGAEIXXXXXXXXXXXXXXXXXSDSWKQYMRRST 144
            GSD GIVNVNIPTNGAEI                 SDSWKQYMRRST
Sbjct:  444 GSDCGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRRST 490

HSP 2 Score: 37.7354 bits (86), Expect = 2.379e-13
Identity = 16/17 (94.12%), Postives = 17/17 (100.00%), Query Frame = 2 
Query:  266 TIDYGNELPLAQGINFG 316
            TI+YGNELPLAQGINFG
Sbjct:  492 TINYGNELPLAQGINFG 508
[Close]
BLAST of CB610911 vs. ExPASy Swiss-Prot
Match: AL7A1_PEA (Aldehyde dehydrogenase family 7 member A1 OS=Pisum sativum PE=1 SV=3)

HSP 1 Score: 56.6102 bits (135), Expect = 8.792e-13
Identity = 29/47 (61.70%), Postives = 29/47 (61.70%), Query Frame = 1 
Query:    4 GSDTGIVNVNIPTNGAEIXXXXXXXXXXXXXXXXXSDSWKQYMRRST 144
            GSD GIVNVNIPTNGAEI                 SDSWKQYMRRST
Sbjct:  444 GSDCGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRRST 490

HSP 2 Score: 35.8094 bits (81), Expect = 8.792e-13
Identity = 15/17 (88.24%), Postives = 17/17 (100.00%), Query Frame = 2 
Query:  266 TIDYGNELPLAQGINFG 316
            TI+YG+ELPLAQGINFG
Sbjct:  492 TINYGSELPLAQGINFG 508
[Close]
BLAST of CB610911 vs. ExPASy Swiss-Prot
Match: AL7A1_MALDO (Aldehyde dehydrogenase family 7 member A1 OS=Malus domestica PE=1 SV=3)

HSP 1 Score: 56.6102 bits (135), Expect = 1.142e-12
Identity = 29/47 (61.70%), Postives = 29/47 (61.70%), Query Frame = 1 
Query:    4 GSDTGIVNVNIPTNGAEIXXXXXXXXXXXXXXXXXSDSWKQYMRRST 144
            GSD GIVNVNIPTNGAEI                 SDSWKQYMRRST
Sbjct:  444 GSDCGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRRST 490

HSP 2 Score: 35.4242 bits (80), Expect = 1.142e-12
Identity = 15/17 (88.24%), Postives = 16/17 (94.12%), Query Frame = 2 
Query:  266 TIDYGNELPLAQGINFG 316
            TI+YG ELPLAQGINFG
Sbjct:  492 TINYGTELPLAQGINFG 508
The following BLAST results are available for this feature:
BLAST of CB610911 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
AL7B4_ARATH2.379e-1361.70Aldehyde dehydrogenase family 7 member B4 OS=Arabi... [more]
AL7A1_PEA8.792e-1361.70Aldehyde dehydrogenase family 7 member A1 OS=Pisum... [more]
AL7A1_MALDO1.142e-1261.70Aldehyde dehydrogenase family 7 member A1 OS=Malus... [more]
back to top
Properties
Property NameValue
Genbank descriptionALBEDO0002_IIIaF_H02 Mature Albedo Citrus sinensis cDNA clone ALBEDO0002_IIIaF_H02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB610911 ID=CB610911; Name=CB610911; organism=Citrus sinensis; type=EST; length=394bp
GGGGGAAGTGACACTGGTATTGTGAATGTAAATATACCTACAAATGGGGC
TGAAATTGGTGGTGCTTTTGGTGGTGAAAAGGCTACAGGGGGAGGCCGCG
AACCAGGAAGTGATTCTTGGAAGCAATACATGCGACGCTCGACTTGGTAA
CCTTATAAGCGCACACACTCCTTGGGATTTTGCCTCTTTCATTTTAAAAA
TCTCTCTTAATTCTCTTTCTACCTTCAATGTTTCTACTGATCAATCAACT
TAACATCCCTGCACCACAATCGACTATGGAAATGAATTGCCTCTGGCCCA
AGGAATCAATTTCGGCTAAGTGGAGCACATTTTGGTCAAGTATGTTAACA
TATTCTGGTTTGATCAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
back to top