CB610979

Overview
NameCB610979
Unique NameCB610979
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length527
Libraries
Library NameType
Mature Albedocdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB610979 vs. ExPASy Swiss-Prot
Match: DCS4_GOSAR ((+)-delta-cadinene synthase isozyme C2 OS=Gossypium arboreum GN=CAD1-C2 PE=2 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 9.429e-44
Identity = 88/166 (53.01%), Postives = 115/166 (69.28%), Query Frame = 1
Query:    4 VFEKFIDDEGIFKSSLINDVQGMLSLYEAAYMTVRGEHILDEAIAFTTTHLKSLVAQ-DHVTPKLAEQINHALYRPLRKTLPRLEARYFMSMINSTSDHLYNKTLLNFAKLDFNIXXXXXXXXXXXXTKWWKDLDFTTKLPYARDRLVELYFWDLGTYFEPQYAFG 498
            VF KF D++G FKSS+ +DVQG+L LY+A+Y+ V GE ILDEAI+FTT HL   V+  DH    L+E+++HAL + +R+ LPR+EAR+++S+      H  NK LL FAK+DFN+             +WWKDLDF  KLPYARDR+VE YFW  G YFEPQY+ G
Sbjct:  132 VFNKFKDEQGNFKSSVTSDVQGLLELYQASYLRVHGEDILDEAISFTTNHLSLAVSSLDH---PLSEEVSHALKQSIRRGLPRVEARHYLSVYQDIESH--NKALLEFAKIDFNMLQFLHRKELSEICRWWKDLDFQRKLPYARDRVVEGYFWISGVYFEPQYSLG 292          
BLAST of CB610979 vs. ExPASy Swiss-Prot
Match: DCS2_GOSAR ((+)-delta-cadinene synthase isozyme XC14 OS=Gossypium arboreum PE=2 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 2.101e-43
Identity = 86/165 (52.12%), Postives = 115/165 (69.70%), Query Frame = 1
Query:    4 VFEKFIDDEGIFKSSLINDVQGMLSLYEAAYMTVRGEHILDEAIAFTTTHLKSLVAQDHVTPKLAEQINHALYRPLRKTLPRLEARYFMSMINSTSDHLYNKTLLNFAKLDFNIXXXXXXXXXXXXTKWWKDLDFTTKLPYARDRLVELYFWDLGTYFEPQYAFG 498
            VF KF D++G FKSS+ +DV+G+L LY+A+Y+ V GE ILDEAI+FTT HL   VA   +   L+E+++HAL + +R+ LPR+EAR+++S+      H  NK LL FAK+DFN+            ++WWKDLDF  KLPYARDR+VE YFW  G YFEPQY+ G
Sbjct:  132 VFNKFKDEQGNFKSSVTSDVRGLLELYQASYLRVHGEDILDEAISFTTNHLSLAVAS--LDYPLSEEVSHALKQSIRRGLPRVEARHYLSVYQDIESH--NKVLLEFAKIDFNMVQLLHRKELSEISRWWKDLDFQRKLPYARDRVVEGYFWISGVYFEPQYSLG 292          
BLAST of CB610979 vs. ExPASy Swiss-Prot
Match: DCS1_GOSHI ((+)-delta-cadinene synthase OS=Gossypium hirsutum GN=CDN1 PE=1 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 2.101e-43
Identity = 87/166 (52.41%), Postives = 116/166 (69.88%), Query Frame = 1
Query:    4 VFEKFIDDEGIFKSSLINDVQGMLSLYEAAYMTVRGEHILDEAIAFTTTHLKSLVAQ-DHVTPKLAEQINHALYRPLRKTLPRLEARYFMSMINSTSDHLYNKTLLNFAKLDFNIXXXXXXXXXXXXTKWWKDLDFTTKLPYARDRLVELYFWDLGTYFEPQYAFG 498
            VF KF D++G FKSS+ +DV+G+L LY+A+Y+ V GE ILDEAI+FT+ HL   VA  DH    L+E+++HAL + +R+ LPR+EAR+++S+      H  NK LL FAK+DFN+            ++WWKDLDF  KLPYARDR+VE YFW  G YFEPQY+ G
Sbjct:  132 VFNKFKDEQGNFKSSVTSDVRGLLELYQASYLRVHGEDILDEAISFTSNHLSLAVASLDH---PLSEEVSHALKQSIRRGLPRVEARHYLSVYQDIESH--NKVLLEFAKIDFNMVQLLHRKELSEISRWWKDLDFQRKLPYARDRVVEGYFWISGVYFEPQYSLG 292          
BLAST of CB610979 vs. ExPASy Swiss-Prot
Match: DCS1_GOSAR ((+)-delta-cadinene synthase isozyme XC1 OS=Gossypium arboreum PE=1 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 2.101e-43
Identity = 88/166 (53.01%), Postives = 115/166 (69.28%), Query Frame = 1
Query:    4 VFEKFIDDEGIFKSSLINDVQGMLSLYEAAYMTVRGEHILDEAIAFTTTHLKSLVAQ-DHVTPKLAEQINHALYRPLRKTLPRLEARYFMSMINSTSDHLYNKTLLNFAKLDFNIXXXXXXXXXXXXTKWWKDLDFTTKLPYARDRLVELYFWDLGTYFEPQYAFG 498
            VF KF D++G FKSS+ +DV+G+L LY+A+Y+ V GE ILDEAI+FTT HL   VA  DH    L+E+++HAL + +R+ LPR+EAR+++S+      H  NK LL FAK+DFN+             +WWKDLDF  KLPYARDR+VE YFW  G YFEPQY+ G
Sbjct:  132 VFNKFKDEQGNFKSSVTSDVRGLLELYQASYLRVHGEDILDEAISFTTHHLSLAVASLDH---PLSEEVSHALKQSIRRGLPRVEARHYLSVYQDIESH--NKALLEFAKIDFNMLQFLHRKELSEICRWWKDLDFQRKLPYARDRVVEGYFWISGVYFEPQYSLG 292          
BLAST of CB610979 vs. ExPASy Swiss-Prot
Match: DCS3_GOSAR ((+)-delta-cadinene synthase isozyme A OS=Gossypium arboreum GN=CAD1-A PE=2 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 6.112e-43
Identity = 88/164 (53.66%), Postives = 111/164 (67.68%), Query Frame = 1
Query:    7 FEKFIDDEGIFKSSLINDVQGMLSLYEAAYMTVRGEHILDEAIAFTTTHLKSLVAQDHVTPKLAEQINHALYRPLRKTLPRLEARYFMSMINSTSDHLYNKTLLNFAKLDFNIXXXXXXXXXXXXTKWWKDLDFTTKLPYARDRLVELYFWDLGTYFEPQYAFG 498
            F KF D+ G FK+SL +DVQG+L LYEA+YM V GE ILDEAI+FTT  L   +   H    L+EQ+ HAL + +R+ LPR+EAR F+S+      H  NK+LL FAK+DFN+             +WWKDLDFT KLP+ARDR+VE YFW +G YFEPQY+ G
Sbjct:  134 FNKFKDEAGNFKASLTSDVQGLLELYEASYMRVHGEDILDEAISFTTAQLTLALPTLH--HPLSEQVGHALKQSIRRGLPRVEARNFISIYQDLESH--NKSLLQFAKIDFNLLQLLHRKELSEICRWWKDLDFTRKLPFARDRVVEGYFWIMGVYFEPQYSLG 293          
BLAST of CB610979 vs. ExPASy Swiss-Prot
Match: 5EAS_TOBAC (Aristolochene synthase OS=Nicotiana tabacum GN=EAS3 PE=1 SV=3)

HSP 1 Score: 162.925 bits (411), Expect = 8.260e-40
Identity = 81/163 (49.69%), Postives = 108/163 (66.26%), Query Frame = 1
Query:    4 VFEKFIDDEGIFKSSLINDVQGMLSLYEAAYMTVRGEHILDEAIAFTTTHLKSLVAQDHVTPKLAEQINHALYRPLRKTLPRLEARYFMSMINSTSDHLYNKTLLNFAKLDFNIXXXXXXXXXXXXTKWWKDLDFTTKLPYARDRLVELYFWDLGTYFEPQYA 492
            +F KF D+ G FK SL +DV G+L+LYEA+++    + IL++A+AF+T HL+S  A  H+   L EQ+ HAL + L K +PR+E R+F+S I    +   N  LL FAKLDFN+            ++WWKDLDF T LPYARDR+VE YFW LG YFEPQY+
Sbjct:  125 IFSKFQDENGKFKESLASDVLGLLNLYEASHVRTHADDILEDALAFSTIHLES--AAPHLKSPLREQVTHALEQCLHKGVPRVETRFFISSIYD-KEQSKNNVLLRFAKLDFNLLQMLHKQELAQVSRWWKDLDFVTTLPYARDRVVECYFWALGVYFEPQYS 284          
BLAST of CB610979 vs. ExPASy Swiss-Prot
Match: CASS_RICCO (Casbene synthase, chloroplastic OS=Ricinus communis PE=1 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 1.045e-34
Identity = 74/163 (45.40%), Postives = 103/163 (63.19%), Query Frame = 1
Query:    4 VFEKFIDDEGIFKSSLINDVQGMLSLYEAAYMTVRGEHILDEAIAFTTTHLKSLVAQDHVTPKLAEQINHALYRPLRKTLPRLEARYFMSMINSTSDHLYNKTLLNFAKLDFNIXXXXXXXXXXXXTKWWKDLDFTTKLPYARDRLVELYFWDLGTYFEPQYA 492
            VF KF D +G FK SL  D +GMLSL+EA++++V GE IL+EA AFT  +L+S   +  + P L   I +AL +P    +PRLEAR F+ +  +  +   N+TLL FAKLD+N             +KWWKDL+  + +PYARDR+ E++FW +  YFEP YA
Sbjct:  179 VFSKFKDSDGKFKESLRGDAKGMLSLFEASHLSVHGEDILEEAFAFTKDYLQSSAVE--LFPNLKRHITNALEQPFHSGVPRLEARKFIDLYEADIE-CRNETLLEFAKLDYNRVQLLHQQELCQFSKWWKDLNLASDIPYARDRMAEIFFWAVAMYFEPDYA 338          
BLAST of CB610979 vs. ExPASy Swiss-Prot
Match: ECS1_ARTAN (Epi-cedrol synthase OS=Artemisia annua GN=ECS1 PE=1 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 2.179e-32
Identity = 75/164 (45.73%), Postives = 94/164 (57.32%), Query Frame = 1
Query:    4 VFEKFIDDEGIFKSSLINDVQGMLSLYEAAYMTVRGEHILDEAIAFTTTHLKSLVAQDHVTPK-LAEQINHALYRPLRKTLPRLEARYFMSMINSTSDHLYNKTLLNFAKLDFNIXXXXXXXXXXXXTKWWKDLDFTTKLPYARDRLVELYFWDLGTYFEPQYA 492
            +F  + D EG FK SL  DV G+L LYEAAYM V GE ILD+A+ FT T L  +     ++   ++ QI  AL +PL K LPRLEA  ++      + H  ++TLL  AKL FN             +KWWK  D    LPYAR+R VE YFW L  YFEPQY+
Sbjct:  121 IFSTYKDKEGRFKESLEKDVHGLLELYEAAYMFVPGEGILDDALVFTRTCLDEIAKNPSLSNSAVSSQIREALTQPLHKRLPRLEALRYIPFYQQQASH--SETLLKLAKLGFNQLQSLHKKELSIISKWWKSFDVANNLPYARNRPVECYFWALAVYFEPQYS 282          
BLAST of CB610979 vs. ExPASy Swiss-Prot
Match: HUMS_ARATH (Alpha-humulene/(-)-(E)-beta-caryophyllene synthase OS=Arabidopsis thaliana GN=TPS21 PE=2 SV=2)

HSP 1 Score: 137.502 bits (345), Expect = 3.717e-32
Identity = 70/163 (42.94%), Postives = 99/163 (60.74%), Query Frame = 1
Query:    4 VFEKFIDDEGIFKSSLINDVQGMLSLYEAAYMTVRGEHILDEAIAFTTTHLKSLVAQDHVTPKLAEQINHALYRPLRKTLPRLEARYFMSMINSTSDHLYNKTLLNFAKLDFNIXXXXXXXXXXXXTKWWKDLDFTTKLPYARDRLVELYFWDLGTYFEPQYA 492
            VFEKF D+ G FK  L+ D  GMLSLYEAA     GE I+DEA+AF+ +HL+ + ++   +P LA +I +AL  P  K + R+E R ++S      +   + TLL FAK+DFN+            T+W  +++F +K+ Y R R+ E Y W LGTYFEPQY+
Sbjct:  124 VFEKFKDENGKFKGHLVTDAYGMLSLYEAAQWGTHGEDIIDEALAFSRSHLEEISSRS--SPHLAIRIKNALKHPYHKGISRIETRQYISYYEE--EESCDPTLLEFAKIDFNLLQILHREELACVTRWHHEMEFKSKVTYTRHRITEAYLWSLGTYFEPQYS 282          
BLAST of CB610979 vs. ExPASy Swiss-Prot
Match: MYRS_QUEIL (Myrcene synthase, chloroplastic OS=Quercus ilex PE=1 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 4.109e-31
Identity = 70/164 (42.68%), Postives = 96/164 (58.54%), Query Frame = 1
Query:    4 VFEKFIDDEGIFKSSLINDVQGMLSLYEAAYMTVRGEHILDEAIAFTTTHLKSLVAQDHVTPKLAEQINHALYRPLRKTLPRLEARYFMSMINSTSDHLYNKTLLNFAKLDFNIXXXXXXXXXXXXTKWWKDLDFTTKLPYARDRLVELYFWDLGTYFEPQYAF 495
            VF  F D+ G FK+ L  D +GMLSLYEA++  + GE+IL+EA  F+T HL+  V Q+     LA  +NH+L  PL   +PRLEAR+F+++     D   N  LL FA+LDFNI            + WWK       L +ARDR VE +FW +G  F+PQ+ +
Sbjct:  171 VFNSFKDERGSFKACLCEDTKGMLSLYEASFFLIEGENILEEARDFSTKHLEEYVKQNK-EKNLATLVNHSLEFPLHWRMPRLEARWFINIYRHNQD--VNPILLEFAELDFNIVQAAHQADLKQVSTWWKSTGLVENLSFARDRPVENFFWTVGLIFQPQFGY 331          
The following BLAST results are available for this feature:
BLAST of CB610979 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 39
Match NameE-valueIdentityDescription
DCS4_GOSAR9.429e-4453.01(+)-delta-cadinene synthase isozyme C2 OS=Gossypiu... [more]
DCS2_GOSAR2.101e-4352.12(+)-delta-cadinene synthase isozyme XC14 OS=Gossyp... [more]
DCS1_GOSHI2.101e-4352.41(+)-delta-cadinene synthase OS=Gossypium hirsutum ... [more]
DCS1_GOSAR2.101e-4353.01(+)-delta-cadinene synthase isozyme XC1 OS=Gossypi... [more]
DCS3_GOSAR6.112e-4353.66(+)-delta-cadinene synthase isozyme A OS=Gossypium... [more]
5EAS_TOBAC8.260e-4049.69Aristolochene synthase OS=Nicotiana tabacum GN=EAS... [more]
CASS_RICCO1.045e-3445.40Casbene synthase, chloroplastic OS=Ricinus communi... [more]
ECS1_ARTAN2.179e-3245.73Epi-cedrol synthase OS=Artemisia annua GN=ECS1 PE=... [more]
HUMS_ARATH3.717e-3242.94Alpha-humulene/(-)-(E)-beta-caryophyllene synthase... [more]
MYRS_QUEIL4.109e-3142.68Myrcene synthase, chloroplastic OS=Quercus ilex PE... [more]

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Properties
Property NameValue
Genbank descriptionALBEDO0001_IaF_F04 Mature Albedo Citrus sinensis cDNA clone ALBEDO0001_IaF_F04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB610979 ID=CB610979; Name=CB610979; organism=Citrus sinensis; type=EST; length=527bp
GGGGTGTTTGAGAAGTTCATAGATGATGAGGGGATATTCAAGTCATCGTT
GATCAACGATGTTCAAGGGATGTTAAGTTTGTACGAGGCAGCATACATGA
CAGTTCGCGGAGAACATATATTAGATGAAGCCATTGCTTTCACTACCACT
CACCTGAAGTCATTGGTAGCTCAGGATCATGTAACCCCTAAGCTTGCGGA
ACAGATAAATCATGCTTTATACCGTCCTCTTCGTAAAACCCTACCAAGAT
TAGAGGCGAGGTATTTTATGTCCATGATCAATTCAACAAGTGATCATTTA
TACAATAAAACTCTGCTGAATTTTGCAAAGTTAGATTTTAACATATTGCT
AGAGCTGCACAAGGAGGAACTCAATGAATTAACAAAGTGGTGGAAAGATT
TAGACTTCACTACAAAACTACCTTATGCAAGAGACAGATTAGTGGAGTTA
TATTTTTGGGATTTAGGGACATACTTCGAGCCTCAATATGCATTTGGCAA
AAAAAAAAAAAAAAAAAAAAAAAAAAA
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