CB611025

Overview
NameCB611025
Unique NameCB611025
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length549
Libraries
Library NameType
Mature Albedocdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2200 contig Csv1_Contig2200:267..816. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB611025 vs. ExPASy Swiss-Prot
Match: RD21A_ARATH (Cysteine proteinase RD21a OS=Arabidopsis thaliana GN=RD21A PE=1 SV=1)

HSP 1 Score: 262.692 bits (670), Expect = 8.322e-70
Identity = 125/167 (74.85%), Postives = 142/167 (85.03%), Query Frame = 3
Query:   30 KDNLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMYLGARF---GAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYR 521
            KDNLRF+DEHN +N +Y++GL RFADLTN+EYRS YLGA+    G +RTSL      RY  RVG+ LP+S+DWRKKGAVAEVKDQG CGSCWAFSTI AVEGIN+IVTG LI+LSEQELVDCDTSYNEGCNGGLMDYAFEFII NGGIDT++DYPYK +DG+CD  R
Sbjct:   77 KDNLRFVDEHNEKNLSYRLGLTRFADLTNDEYRSKYLGAKMEKKGERRTSL------RYEARVGDELPESIDWRKKGAVAEVKDQGGCGSCWAFSTIGAVEGINQIVTGDLITLSEQELVDCDTSYNEGCNGGLMDYAFEFIIKNGGIDTDKDYPYKGVDGTCDQIR 237          
BLAST of CB611025 vs. ExPASy Swiss-Prot
Match: ORYA_ORYSJ (Oryzain alpha chain OS=Oryza sativa subsp. japonica GN=Os04g0650000 PE=1 SV=2)

HSP 1 Score: 245.743 bits (626), Expect = 1.053e-64
Identity = 121/168 (72.02%), Postives = 136/168 (80.95%), Query Frame = 3
Query:   30 KDNLRFIDEHNSEN----RTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYR 521
            +DNLR+IDEHN+       ++++GLNRFADLTNEEYR  YLG R   +R   + K SDRYL    EALP+SVDWR KGAVAE+KDQG CGSCWAFS IAAVEGIN+IVTG LISLSEQELVDCDTSYNEGCNGGLMDYAF+FII+NGGIDTE+DYPYK  D  CD  R
Sbjct:   65 RDNLRYIDEHNAAADAGVHSFRLGLNRFADLTNEEYRDTYLGLRNKPRR---ERKVSDRYLAADNEALPESVDWRTKGAVAEIKDQGGCGSCWAFSAIAAVEGINQIVTGDLISLSEQELVDCDTSYNEGCNGGLMDYAFDFIINNGGIDTEDDYPYKGKDERCDVNR 229          
BLAST of CB611025 vs. ExPASy Swiss-Prot
Match: GCP1_ARATH (Germination-specific cysteine protease 1 OS=Arabidopsis thaliana GN=GCP1 PE=2 SV=2)

HSP 1 Score: 229.95 bits (585), Expect = 5.978e-60
Identity = 109/167 (65.27%), Postives = 135/167 (80.84%), Query Frame = 3
Query:   30 KDNLRFIDEHNSENR--TYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKR-SDRYLPRV-GEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTY 518
            KDNLRFID HN +N+  TYK+GL +F DLTN+EYR +YLGAR    R   K+K  + +Y   V G+ +P++VDWR+KGAV  +KDQG+CGSCWAFST AAVEGINKIVTG LISLSEQELVDCD SYN+GCNGGLMDYAF+FI+ NGG++TE+DYPY+   G C+++
Sbjct:   78 KDNLRFIDLHNEDNKNATYKLGLTKFTDLTNDEYRKLYLGARTEPARRIAKAKNVNQKYSAAVNGKEVPETVDWRQKGAVNPIKDQGTCGSCWAFSTTAAVEGINKIVTGELISLSEQELVDCDKSYNQGCNGGLMDYAFQFIMKNGGLNTEKDYPYRGFGGKCNSF 244          
BLAST of CB611025 vs. ExPASy Swiss-Prot
Match: CYSP4_BRANA (Cysteine proteinase COT44 (Fragment) OS=Brassica napus PE=2 SV=1)

HSP 1 Score: 221.09 bits (562), Expect = 2.777e-57
Identity = 108/166 (65.06%), Postives = 132/166 (79.52%), Query Frame = 3
Query:   30 KDNLRFIDEHNSENR--TYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSD-RYLPRVG-EALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDT 515
            KDNLRFID HN  N+  TYK+GL  FA+LTN+EYRS+YLGAR    R   K+K  + +Y   V  + +P +VDWR+KGAV  +KDQG+CGSCWAFST AAVEGINKIVTG L+SLSEQELVDCD SYN+GCNGGLMDYAF+FI+ NGG++TE+DYPY   +G C++
Sbjct:   33 KDNLRFIDLHNENNKNATYKLGLTIFANLTNDEYRSLYLGARTEPVRRITKAKNVNMKYSAAVNVDEVPVTVDWRQKGAVNAIKDQGTCGSCWAFSTAAAVEGINKIVTGELVSLSEQELVDCDKSYNQGCNGGLMDYAFQFIMKNGGLNTEKDYPYHGTNGKCNS 198          
BLAST of CB611025 vs. ExPASy Swiss-Prot
Match: XCP2_ARATH (Xylem cysteine proteinase 2 OS=Arabidopsis thaliana GN=XCP2 PE=1 SV=2)

HSP 1 Score: 218.009 bits (554), Expect = 2.351e-56
Identity = 102/161 (63.35%), Postives = 129/161 (80.12%), Query Frame = 3
Query:   30 KDNLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCD 512
            KDNL+ IDE N + ++Y +GLN FADL++EE++ MYLG +    R   +   ++ +  R  EA+P SVDWRKKGAVAEVK+QGSCGSCWAFST+AAVEGINKIVTG+L +LSEQEL+DCDT+YN GCNGGLMDYAFE+I+ NGG+  EEDYPY   +G+C+
Sbjct:   76 KDNLKHIDETNKKGKSYWLGLNEFADLSHEEFKKMYLGLKTDIVRRDEERSYAE-FAYRDVEAVPKSVDWRKKGAVAEVKNQGSCGSCWAFSTVAAVEGINKIVTGNLTTLSEQELIDCDTTYNNGCNGGLMDYAFEYIVKNGGLRKEEDYPYSMEEGTCE 235          
BLAST of CB611025 vs. ExPASy Swiss-Prot
Match: ACTN_ACTDE (Actinidain OS=Actinidia deliciosa PE=1 SV=1)

HSP 1 Score: 213.001 bits (541), Expect = 7.562e-55
Identity = 105/163 (64.42%), Postives = 126/163 (77.30%), Query Frame = 3
Query:   30 KDNLRFIDEHNSE-NRTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYN-EGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCD 512
            K+ LRFIDEHN++ NR+YKVGLN+FADLT+EE+RS YLG   G+ +T    K S+RY PRVG+ LP  VDWR  GAV ++K QG CG CWAFS IA VEGINKIVTG LISLSEQEL+DC  + N  GCNGG +   F+FII+NGGI+TEE+YPY A DG C+
Sbjct:   67 KETLRFIDEHNADTNRSYKVGLNQFADLTDEEFRSTYLGFTSGSNKT----KVSNRYEPRVGQVLPSYVDWRSAGAVVDIKSQGECGGCWAFSAIATVEGINKIVTGVLISLSEQELIDCGRTQNTRGCNGGYITDGFQFIINNGGINTEENYPYTAQDGECN 225          
BLAST of CB611025 vs. ExPASy Swiss-Prot
Match: CPR1_ARATH (Probable cysteine proteinase At3g19400 OS=Arabidopsis thaliana GN=At3g19400 PE=2 SV=1)

HSP 1 Score: 212.616 bits (540), Expect = 9.876e-55
Identity = 103/164 (62.80%), Postives = 130/164 (79.27%), Query Frame = 3
Query:   30 KDNLRFIDEHNS-ENRTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAID-GSCD 512
            KDNL+F+DEHNS  +RT++VGL RFADLTNEE+R++YL  +    + S+K+   +RYL + G+ LPD VDWR  GAV  VKDQG+CGSCWAFS + AVEGIN+I TG LISLSEQELVDCD  + N GC+GG+M+YAFEFI+ NGGI+T++DYPY A D G C+
Sbjct:   69 KDNLKFVDEHNSVPDRTFEVGLTRFADLTNEEFRAIYLRKKMERTKDSVKT---ERYLYKEGDVLPDEVDWRANGAVVSVKDQGNCGSCWAFSAVGAVEGINQITTGELISLSEQELVDCDRGFVNAGCDGGIMNYAFEFIMKNGGIETDQDYPYNANDLGLCN 229          
BLAST of CB611025 vs. ExPASy Swiss-Prot
Match: ACTN_ACTCH (Actinidain OS=Actinidia chinensis PE=1 SV=4)

HSP 1 Score: 209.92 bits (533), Expect = 6.402e-54
Identity = 104/163 (63.80%), Postives = 125/163 (76.69%), Query Frame = 3
Query:   30 KDNLRFIDEHNSE-NRTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYN-EGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCD 512
            K+ LRFIDEHN++ NR+YKVGLN+FADLT+EE+RS YL    G+ +T    K S+RY PRVG+ LP  VDWR  GAV ++K QG CG CWAFS IA VEGINKIVTG LISLSEQEL+DC  + N  GCNGG +   F+FII+NGGI+TEE+YPY A DG C+
Sbjct:   67 KETLRFIDEHNADTNRSYKVGLNQFADLTDEEFRSTYLRFTSGSNKT----KVSNRYEPRVGQVLPSYVDWRSAGAVVDIKSQGECGGCWAFSAIATVEGINKIVTGVLISLSEQELIDCGRTQNTRGCNGGYITDGFQFIINNGGINTEENYPYTAQDGECN 225          
BLAST of CB611025 vs. ExPASy Swiss-Prot
Match: ORYB_ORYSJ (Oryzain beta chain OS=Oryza sativa subsp. japonica GN=Os04g0670200 PE=1 SV=2)

HSP 1 Score: 206.068 bits (523), Expect = 9.244e-53
Identity = 99/167 (59.28%), Postives = 127/167 (76.05%), Query Frame = 3
Query:   33 DNLRFIDEHNS---ENRTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTS-YNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYR 521
            DNL+F+D HN+   E   +++G+NRFADLTNEE+R+ +LGA+   +  +      +RY     E LP+SVDWR+KGAVA VK+QG CGSCWAFS ++ VE IN++VTG +I+LSEQELV+C T+  N GCNGGLMD AF+FII NGGIDTE+DYPYKA+DG CD  R
Sbjct:   80 DNLKFVDAHNARADERGGFRLGMNRFADLTNEEFRATFLGAKVAERSRAA----GERYRHDGVEELPESVDWREKGAVAPVKNQGQCGSCWAFSAVSTVESINQLVTGEMITLSEQELVECSTNGQNSGCNGGLMDDAFDFIIKNGGIDTEDDYPYKAVDGKCDINR 242          
BLAST of CB611025 vs. ExPASy Swiss-Prot
Match: XCP1_ARATH (Xylem cysteine proteinase 1 OS=Arabidopsis thaliana GN=XCP1 PE=1 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 1.130e-50
Identity = 96/160 (60.00%), Postives = 119/160 (74.38%), Query Frame = 3
Query:   30 KDNLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSC 509
            ++NL  ID+ N+E  +Y +GLN FADLT+EE++  YLG      + S K + S  +  R    LP SVDWRKKGAVA VKDQG CGSCWAFST+AAVEGIN+I TG+L SLSEQEL+DCDT++N GCNGGLMDYAF++II  GG+  E+DYPY   +G C
Sbjct:   76 RENLMHIDQRNNEINSYWLGLNEFADLTHEEFKGRYLG--LAKPQFSRKRQPSANFRYRDITDLPKSVDWRKKGAVAPVKDQGQCGSCWAFSTVAAVEGINQITTGNLSSLSEQELIDCDTTFNSGCNGGLMDYAFQYIISTGGLHKEDDYPYLMEEGIC 233          
The following BLAST results are available for this feature:
BLAST of CB611025 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 159
Match NameE-valueIdentityDescription
RD21A_ARATH8.322e-7074.85Cysteine proteinase RD21a OS=Arabidopsis thaliana ... [more]
ORYA_ORYSJ1.053e-6472.02Oryzain alpha chain OS=Oryza sativa subsp. japonic... [more]
GCP1_ARATH5.978e-6065.27Germination-specific cysteine protease 1 OS=Arabid... [more]
CYSP4_BRANA2.777e-5765.06Cysteine proteinase COT44 (Fragment) OS=Brassica n... [more]
XCP2_ARATH2.351e-5663.35Xylem cysteine proteinase 2 OS=Arabidopsis thalian... [more]
ACTN_ACTDE7.562e-5564.42Actinidain OS=Actinidia deliciosa PE=1 SV=1[more]
CPR1_ARATH9.876e-5562.80Probable cysteine proteinase At3g19400 OS=Arabidop... [more]
ACTN_ACTCH6.402e-5463.80Actinidain OS=Actinidia chinensis PE=1 SV=4[more]
ORYB_ORYSJ9.244e-5359.28Oryzain beta chain OS=Oryza sativa subsp. japonica... [more]
XCP1_ARATH1.130e-5060.00Xylem cysteine proteinase 1 OS=Arabidopsis thalian... [more]

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Properties
Property NameValue
Genbank descriptionALBEDO0001_IaF_C03 Mature Albedo Citrus sinensis cDNA clone ALBEDO0001_IaF_C03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB611025 ID=CB611025; Name=CB611025; organism=Citrus sinensis; type=EST; length=549bp
GGGGAAAAAGAGAAAAGGTTTGAGATCTTAAGGACAATCTTAGGTTTATT
GATGAACATAACTCAGAGAACCGGACCTACAAGGTTGGGTTGAACCGGTT
TGCTGATTTGACCAACGAGGAGTACCGGTCCATGTATCTGGGTGCACGCT
TTGGTGCTAAAAGGACTTCCTTGAAATCAAAGAGGAGCGATCGTTATCTG
CCACGTGTCGGCGAGGCGTTGCCGGACTCTGTTGATTGGAGGAAGAAAGG
AGCTGTCGCTGAAGTTAAAGATCAAGGAAGCTGTGGGAGTTGCTGGGCAT
TTTCAACCATTGCTGCTGTAGAGGGTATAAACAAGATTGTTACAGGTAGC
CTGATCTCACTATCCGAGCAGGAGTTGGTGGATTGTGATACATCATATAA
TGAAGGATGTAATGGTGGTTTGATGGACTATGCATTCGAGTTCATTATTG
ATAATGGAGGTATTGACACAGAAGAAGATTACCCCTACAAAGCCATTGAT
GGTAGCTGTGACACATATCGAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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