CB611026

Overview
NameCB611026
Unique NameCB611026
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length697
Libraries
Library NameType
Mature Albedocdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9356 contig Csv1_Contig9356:200..896. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB611026 vs. ExPASy Swiss-Prot
Match: ATG8I_ARATH (Autophagy-related protein 8i OS=Arabidopsis thaliana GN=ATG8I PE=2 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 1.909e-47
Identity = 89/114 (78.07%), Postives = 105/114 (92.11%), Query Frame = 1
Query:   64 MQSFKDEFTFEQRLEESREIIAKYPDRVPVIAERYSKADLPDMEKKKFLVPRDMSVGQFIHILSSRLHLTPGKALFVFVKDTLPQTATLMDSVYGSFKDEDGFLYMCYSSEKTF 405
            M+SFK+++T ++RL ESREIIAKYP R+PVIAE+Y K DLP +EKKKFLVPRDMSVGQFI+ILS+RLHL+PGKALFVFV +TLPQTA LMDSVY S+KD+DGF+YMCYSSEKTF
Sbjct:    1 MKSFKEQYTLDERLAESREIIAKYPTRIPVIAEKYCKTDLPAIEKKKFLVPRDMSVGQFIYILSARLHLSPGKALFVFVNNTLPQTAALMDSVYESYKDDDGFVYMCYSSEKTF 114          
BLAST of CB611026 vs. ExPASy Swiss-Prot
Match: ATG8H_ARATH (Autophagy-related protein 8h OS=Arabidopsis thaliana GN=ATG8H PE=2 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.280e-43
Identity = 81/114 (71.05%), Postives = 100/114 (87.72%), Query Frame = 1
Query:   64 MQSFKDEFTFEQRLEESREIIAKYPDRVPVIAERYSKADLPDMEKKKFLVPRDMSVGQFIHILSSRLHLTPGKALFVFVKDTLPQTATLMDSVYGSFKDEDGFLYMCYSSEKTF 405
            ++SFKD+F+ ++RL+ES  IIAKYPDR+PVI E+YS ADLPDMEK K+LVPRDM+VG FIH+LS R+ L P KALFVFV +TLPQTA+ MDS+Y +FK+EDGFLYMCYS+EKTF
Sbjct:    5 VKSFKDQFSSDERLKESNNIIAKYPDRIPVIIEKYSNADLPDMEKNKYLVPRDMTVGHFIHMLSKRMQLDPSKALFVFVHNTLPQTASRMDSLYNTFKEEDGFLYMCYSTEKTF 118          
BLAST of CB611026 vs. ExPASy Swiss-Prot
Match: ATG8D_ORYSJ (Autophagy-related protein 8D OS=Oryza sativa subsp. japonica GN=ATG8D PE=3 SV=2)

HSP 1 Score: 162.925 bits (411), Expect = 1.465e-39
Identity = 79/116 (68.10%), Postives = 98/116 (84.48%), Query Frame = 1
Query:   61 KMQSFKDEFTFEQRLEESREIIAKYPDRVPVIAERYSKADLPDMEKKKFLVPRDMSVGQFIHILSSRLHLTPGKALFVFVKDTLPQTATLMDSVYGSFKDE-DGFLYMCYSSEKTF 405
            K + FK+EFT E+R +ES  +IA YPDR+PVI E++S+++LP+MEK+K+LVP +M VGQFI IL SRLHL+PG ALFVFV +TLPQTA LM SVY S+KDE DGFLY+CYSSEKTF
Sbjct:    2 KPRPFKEEFTLEERAKESAAMIASYPDRIPVIVEKFSRSNLPEMEKRKYLVPCNMPVGQFIFILRSRLHLSPGTALFVFVNNTLPQTAQLMGSVYESYKDEGDGFLYLCYSSEKTF 117          
BLAST of CB611026 vs. ExPASy Swiss-Prot
Match: ATG8_CANGA (Autophagy-related protein 8 OS=Candida glabrata GN=ATG8 PE=3 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 8.608e-32
Identity = 60/115 (52.17%), Postives = 86/115 (74.78%), Query Frame = 1
Query:   70 SFKDEFTFEQRLEESREIIAKYPDRVPVIAERYSKADLPDMEKKKFLVPRDMSVGQFIHILSSRLHLTPGKALFVFVKDTLPQTATLMDSVYGSFKDEDGFLYMCYSSEKTFSYE 414
            SFK E+ FE+R  ES  I  K+ +R+PVI E+  K+D+P+++K+K+LVP D++VGQF++++  R+ L P KA+F+FV DTLP TA+LM  VY   KD+DGFLY+ YS E TF Y+
Sbjct:    4 SFKSEYPFEKRKAESERISEKFQNRIPVICEKAEKSDIPEVDKRKYLVPADLTVGQFVYVIRKRIMLPPEKAIFIFVNDTLPPTASLMSQVYQEHKDKDGFLYVTYSGENTFGYQ 118          
BLAST of CB611026 vs. ExPASy Swiss-Prot
Match: ATG8D_ARATH (Autophagy-related protein 8d OS=Arabidopsis thaliana GN=ATG8D PE=1 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 8.608e-32
Identity = 61/114 (53.51%), Postives = 85/114 (74.56%), Query Frame = 1
Query:   64 MQSFKDEFTFEQRLEESREIIAKYPDRVPVIAERYSKADLPDMEKKKFLVPRDMSVGQFIHILSSRLHLTPGKALFVFVKDTLPQTATLMDSVYGSFKDEDGFLYMCYSSEKTF 405
            + SFK E   E+R  E+  I  KYPDR+PVI ER  K+D+PD+++KK+LVP D++VGQF++++  R+ L+P KA+F+FVK+ LP TA +M ++Y   KDEDGFLYM YS E TF
Sbjct:    3 ISSFKHEHPLEKRQAEAARIREKYPDRIPVIVERAEKSDVPDIDRKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVKNILPPTAAIMSAIYEEHKDEDGFLYMSYSGENTF 116          
BLAST of CB611026 vs. ExPASy Swiss-Prot
Match: ATG8_KLULA (Autophagy-related protein 8 OS=Kluyveromyces lactis GN=ATG8 PE=3 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 1.124e-31
Identity = 61/112 (54.46%), Postives = 85/112 (75.89%), Query Frame = 1
Query:   70 SFKDEFTFEQRLEESREIIAKYPDRVPVIAERYSKADLPDMEKKKFLVPRDMSVGQFIHILSSRLHLTPGKALFVFVKDTLPQTATLMDSVYGSFKDEDGFLYMCYSSEKTF 405
            +FK EF FE+R  ES  I+ K+ +R+PVI ER  K+D+PD++K+K+LVP D++VGQF++++  R+ L   KA+F+FV DTLP TA LM S+Y   KD+DGFLY+ YSSE TF
Sbjct:    4 AFKSEFPFEKRKAESERIVQKFHNRIPVICERGGKSDIPDIDKRKYLVPGDLTVGQFVYVIRKRIKLPAEKAIFIFVNDTLPPTAALMSSIYQQHKDKDGFLYVSYSSENTF 115          
BLAST of CB611026 vs. ExPASy Swiss-Prot
Match: ATG8_PHYIN (Autophagy-related protein 8 OS=Phytophthora infestans GN=ATG8 PE=3 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 1.918e-31
Identity = 59/114 (51.75%), Postives = 86/114 (75.44%), Query Frame = 1
Query:   64 MQSFKDEFTFEQRLEESREIIAKYPDRVPVIAERYSKADLPDMEKKKFLVPRDMSVGQFIHILSSRLHLTPGKALFVFVKDTLPQTATLMDSVYGSFKDEDGFLYMCYSSEKTF 405
            M SFK E  FE+R  E++ I +KYPDR+PVI E+  ++D+PD++KKK+LVP D++VGQF++++  R+ L+P KA+F+F+ + LP TA LM ++Y   KD DGFLY+ YS E TF
Sbjct:    1 MSSFKKEHPFEKRQAEAQRIRSKYPDRIPVICEKADRSDIPDIDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFINNVLPPTAALMSNIYEEQKDVDGFLYITYSGENTF 114          
BLAST of CB611026 vs. ExPASy Swiss-Prot
Match: ATG8B_ORYSJ (Autophagy-related protein 8B OS=Oryza sativa subsp. japonica GN=ATG8B PE=3 SV=2)

HSP 1 Score: 135.576 bits (340), Expect = 2.504e-31
Identity = 61/112 (54.46%), Postives = 85/112 (75.89%), Query Frame = 1
Query:   70 SFKDEFTFEQRLEESREIIAKYPDRVPVIAERYSKADLPDMEKKKFLVPRDMSVGQFIHILSSRLHLTPGKALFVFVKDTLPQTATLMDSVYGSFKDEDGFLYMCYSSEKTF 405
            SFK + T E+R  E+  I  KY DR+PVI E+  ++D+PD++KKK+LVP D++VGQF++++  R+ L+P KA+F+FVK+TLP TA LM ++Y   KDEDGFLYM YS E TF
Sbjct:    5 SFKLDHTLERRQAEANRIREKYSDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVKNTLPPTAALMSAIYEENKDEDGFLYMTYSGENTF 116          
BLAST of CB611026 vs. ExPASy Swiss-Prot
Match: ATG8B_ORYSI (Autophagy-related protein 8B OS=Oryza sativa subsp. indica GN=ATG8B PE=3 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 2.504e-31
Identity = 61/112 (54.46%), Postives = 85/112 (75.89%), Query Frame = 1
Query:   70 SFKDEFTFEQRLEESREIIAKYPDRVPVIAERYSKADLPDMEKKKFLVPRDMSVGQFIHILSSRLHLTPGKALFVFVKDTLPQTATLMDSVYGSFKDEDGFLYMCYSSEKTF 405
            SFK + T E+R  E+  I  KY DR+PVI E+  ++D+PD++KKK+LVP D++VGQF++++  R+ L+P KA+F+FVK+TLP TA LM ++Y   KDEDGFLYM YS E TF
Sbjct:    5 SFKLDHTLERRQAEANRIREKYSDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVKNTLPPTAALMSAIYEENKDEDGFLYMTYSGENTF 116          
BLAST of CB611026 vs. ExPASy Swiss-Prot
Match: ATG8_MAGGR (Autophagy-related protein 8 OS=Magnaporthe grisea GN=ATG8 PE=3 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 3.271e-31
Identity = 61/111 (54.95%), Postives = 83/111 (74.77%), Query Frame = 1
Query:   73 FKDEFTFEQRLEESREIIAKYPDRVPVIAERYSKADLPDMEKKKFLVPRDMSVGQFIHILSSRLHLTPGKALFVFVKDTLPQTATLMDSVYGSFKDEDGFLYMCYSSEKTF 405
            FKDE  FE+R  E+  I  KY DR+PVI E+  K+D+  ++KKK+LVP D++VGQF++++  R+ L+P KA+F+FV+DTLP TA LM S+Y   KDEDGFLY+ YS E TF
Sbjct:    5 FKDEHPFEKRKAEAERIRQKYTDRIPVICEKVEKSDIATIDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVQDTLPPTAALMSSIYELHKDEDGFLYITYSGENTF 115          
The following BLAST results are available for this feature:
BLAST of CB611026 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 84
Match NameE-valueIdentityDescription
ATG8I_ARATH1.909e-4778.07Autophagy-related protein 8i OS=Arabidopsis thalia... [more]
ATG8H_ARATH1.280e-4371.05Autophagy-related protein 8h OS=Arabidopsis thalia... [more]
ATG8D_ORYSJ1.465e-3968.10Autophagy-related protein 8D OS=Oryza sativa subsp... [more]
ATG8_CANGA8.608e-3252.17Autophagy-related protein 8 OS=Candida glabrata GN... [more]
ATG8D_ARATH8.608e-3253.51Autophagy-related protein 8d OS=Arabidopsis thalia... [more]
ATG8_KLULA1.124e-3154.46Autophagy-related protein 8 OS=Kluyveromyces lacti... [more]
ATG8_PHYIN1.918e-3151.75Autophagy-related protein 8 OS=Phytophthora infest... [more]
ATG8B_ORYSJ2.504e-3154.46Autophagy-related protein 8B OS=Oryza sativa subsp... [more]
ATG8B_ORYSI2.504e-3154.46Autophagy-related protein 8B OS=Oryza sativa subsp... [more]
ATG8_MAGGR3.271e-3154.95Autophagy-related protein 8 OS=Magnaporthe grisea ... [more]

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Properties
Property NameValue
Genbank descriptionALBEDO0001_IaF_C04 Mature Albedo Citrus sinensis cDNA clone ALBEDO0001_IaF_C04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB611026 ID=CB611026; Name=CB611026; organism=Citrus sinensis; type=EST; length=697bp
GGGGAGTTCAGCCGTTTGGGTTTCTCTTTCCTTGAGAGTTGAGACGATAC
GGAGATGGGAAAGATGCAATCTTTCAAGGACGAGTTCACATTCGAGCAAA
GACTTGAAGAATCGCGCGAAATCATTGCGAAATACCCCGATCGAGTCCCC
GTAATTGCGGAAAGATATTCAAAAGCTGACCTTCCTGATATGGAAAAGAA
AAAATTTCTGGTTCCTCGGGACATGTCTGTTGGGCAATTTATTCACATTT
TAAGCAGCAGGCTTCACCTGACCCCTGGAAAGGCTCTCTTTGTATTTGTG
AAAGATACTTTACCGCAAACAGCGACTTTAATGGACTCAGTCTATGGATC
CTTCAAGGATGAGGATGGATTCCTGTATATGTGCTACAGCAGTGAGAAAA
CCTTTAGTTATGAAAGAATTCAGACTTGTTAATACTTGAACTTTGTTCAT
GGCTGTGTGCTACTGTGCTTTACATGCCACTCCTTGTTGTGAAATGATGT
ATATAACTCAGCATGGCCATTGATGTTGTATTATCTGTCTTAGTTTATTC
TGCAGATTGTTTAAACATCAGAAATGTCTCGTGTGTGGATATAACTTGCG
TGTGGATATAACTTATGATTCCATCAACCTGCTTTGACGTTTCATATGCA
ATCTATTTTTTTTGGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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