CB611033 | Citrus Genome Database

Overview


Name	CB611033
Unique Name	CB611033
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	213

Libraries


Library Name	Type
Mature Albedo	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

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BLAST of CB611033 vs. ExPASy Swiss-Prot
Match: M030_ARATH (Uncharacterized mitochondrial protein AtMg00030 OS=Arabidopsis thaliana GN=AtMg00030 PE=4 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 6.501e-15
Identity = 38/56 (67.86%), Postives = 40/56 (71.43%), Query Frame = -2

Query:    3 FQFVKLEKSKEARLPPELGSGFPMGDPGIPAGFSPGPFPLESVLLFQCPGIHPIHS 170
            FQF K  KSKE RL  ELG GFP+GDP I  G SP PF  ESVL  QCPGIHP+HS
Sbjct:    2 FQFAKFSKSKERRLATELGYGFPIGDPWITDGISPWPFASESVLPSQCPGIHPMHS 57

The following BLAST results are available for this feature:

BLAST of CB611033 vs. ExPASy Swiss-Prot

BLAST of CB611033 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1


Match Name	E-value	Identity	Description
M030_ARATH	6.501e-15	67.86	Uncharacterized mitochondrial protein AtMg00030 OS...	[more]

Properties


Property Name	Value
Genbank description	ALBEDO0001_IaF_A09 Mature Albedo Citrus sinensis cDNA clone ALBEDO0001_IaF_A09 5, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>CB611033 ID=CB611033; Name=CB611033; organism=Citrus sinensis; type=EST; length=213bp
GGGGAATGGATTGGATGGATTCCCGGGCATTGAAAAAGAAGGACGCTTTC
CAAAGGGAAAGGGCCTGGGGAAAAACCGGCTGGGATCCCTGGATCCCCCA
TCGGGAAACCGGATCCCAGCTCCGGGGGTAATCTGGCCTCTTTGGACTTT
TCCAACTTAACGAACTGAAACCTCTGAATAGCCGAAAAAAAAAAAAAAAA
AAAAAAAAAAAAA