CB611042
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB611042 vs. ExPASy Swiss-Prot
Match: SUI1_SPOST (Protein translation factor SUI1 homolog OS=Sporobolus stapfianus PE=3 SV=1) HSP 1 Score: 185.652 bits (470), Expect = 2.022e-46 Identity = 93/115 (80.87%), Postives = 99/115 (86.09%), Query Frame = 1 Query: 235 MSDFDIQVXXXXXXXXXXKAEDSGA--GSKEYVHIRVQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVRAGIVKKEHIKMHGF 573 MSD DIQ+ A DSGA GSK+YVH+R+QQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVS FLV+AGIVKKEHIK+HGF Sbjct: 1 MSDLDIQIPTAFDPFSEANAGDSGAAAGSKDYVHVRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSNFLVQAGIVKKEHIKIHGF 115
BLAST of CB611042 vs. ExPASy Swiss-Prot
Match: SUI1_ORYSJ (Protein translation factor SUI1 homolog OS=Oryza sativa subsp. japonica GN=GOS2 PE=3 SV=1) HSP 1 Score: 185.652 bits (470), Expect = 2.022e-46 Identity = 93/115 (80.87%), Postives = 99/115 (86.09%), Query Frame = 1 Query: 235 MSDFDIQVXXXXXXXXXXKAEDSGA--GSKEYVHIRVQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVRAGIVKKEHIKMHGF 573 MSD DIQ+ A DSGA GSK+YVH+R+QQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVS FLV+AGIVKKEHIK+HGF Sbjct: 1 MSDLDIQIPTAFDPFAEANAGDSGAAAGSKDYVHVRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSNFLVQAGIVKKEHIKIHGF 115
BLAST of CB611042 vs. ExPASy Swiss-Prot
Match: SUI1_ORYSI (Protein translation factor SUI1 homolog OS=Oryza sativa subsp. indica GN=GOS2 PE=2 SV=1) HSP 1 Score: 185.652 bits (470), Expect = 2.022e-46 Identity = 93/115 (80.87%), Postives = 99/115 (86.09%), Query Frame = 1 Query: 235 MSDFDIQVXXXXXXXXXXKAEDSGA--GSKEYVHIRVQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVRAGIVKKEHIKMHGF 573 MSD DIQ+ A DSGA GSK+YVH+R+QQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVS FLV+AGIVKKEHIK+HGF Sbjct: 1 MSDLDIQIPTAFDPFAEANAGDSGAAAGSKDYVHVRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSNFLVQAGIVKKEHIKIHGF 115
BLAST of CB611042 vs. ExPASy Swiss-Prot
Match: SUI1_SALBA (Protein translation factor SUI1 homolog OS=Salix bakko PE=3 SV=1) HSP 1 Score: 183.726 bits (465), Expect = 7.682e-46 Identity = 89/113 (78.76%), Postives = 100/113 (88.50%), Query Frame = 1 Query: 235 MSDFDIQVXXXXXXXXXXKAEDSGAGSKEYVHIRVQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVRAGIVKKEHIKMHGF 573 MS+FD + AEDSGAG+K+YVH+RVQQRNGRKSLTTVQGLKK++SYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVS+FLV+AGIVKKE+IK+HGF Sbjct: 1 MSEFDNAIPTAFDPFAEANAEDSGAGTKDYVHVRVQQRNGRKSLTTVQGLKKDYSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSSFLVQAGIVKKENIKIHGF 113
BLAST of CB611042 vs. ExPASy Swiss-Prot
Match: SUI1_MAIZE (Protein translation factor SUI1 homolog OS=Zea mays GN=TIF PE=3 SV=1) HSP 1 Score: 183.726 bits (465), Expect = 7.682e-46 Identity = 92/115 (80.00%), Postives = 99/115 (86.09%), Query Frame = 1 Query: 235 MSDFDIQVXXXXXXXXXXKAEDSGA--GSKEYVHIRVQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVRAGIVKKEHIKMHGF 573 MSD DIQ+ A DSGA GSK+YVH+R+QQRNGRKSLTTVQGLKKEFSY+KILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVS FLV+AGIVKKEHIK+HGF Sbjct: 1 MSDLDIQIPTAFDPFAEANAGDSGAAAGSKDYVHVRIQQRNGRKSLTTVQGLKKEFSYSKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSNFLVQAGIVKKEHIKIHGF 115
BLAST of CB611042 vs. ExPASy Swiss-Prot
Match: SUI12_ARATH (Protein translation factor SUI1 homolog 2 OS=Arabidopsis thaliana GN=At1g54290 PE=2 SV=1) HSP 1 Score: 183.726 bits (465), Expect = 7.682e-46 Identity = 90/113 (79.65%), Postives = 100/113 (88.50%), Query Frame = 1 Query: 235 MSDFDIQVXXXXXXXXXXKAEDSGAGSKEYVHIRVQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVRAGIVKKEHIKMHGF 573 MSD ++QV AEDSGAG+KEYVHIRVQQRNGRKSLTTVQGLKKE+SY+KILKDLKKEFCCNGTVVQD ELGQVIQLQGDQRKNVSTFLV+AG+VKK++IK+HGF Sbjct: 1 MSDLEVQVPTAFDPFADANAEDSGAGTKEYVHIRVQQRNGRKSLTTVQGLKKEYSYSKILKDLKKEFCCNGTVVQDSELGQVIQLQGDQRKNVSTFLVQAGLVKKDNIKIHGF 113
BLAST of CB611042 vs. ExPASy Swiss-Prot
Match: SUI11_ARATH (Protein translation factor SUI1 homolog 1 OS=Arabidopsis thaliana GN=At4g27130 PE=2 SV=2) HSP 1 Score: 181.415 bits (459), Expect = 3.813e-45 Identity = 90/113 (79.65%), Postives = 98/113 (86.73%), Query Frame = 1 Query: 235 MSDFDIQVXXXXXXXXXXKAEDSGAGSKEYVHIRVQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVRAGIVKKEHIKMHGF 573 MS+ D QV AEDSGAG+KEYVHIRVQQRNGRKSLTTVQGLKKE+SY KILKDLKKEFCCNGTVVQD ELGQVIQLQGDQRKNVSTFLV+AG+VKK++IK+HGF Sbjct: 1 MSELDSQVPTAFDPFADANAEDSGAGTKEYVHIRVQQRNGRKSLTTVQGLKKEYSYTKILKDLKKEFCCNGTVVQDSELGQVIQLQGDQRKNVSTFLVQAGLVKKDNIKIHGF 113
BLAST of CB611042 vs. ExPASy Swiss-Prot
Match: SUI1_BRAOL (Protein translation factor SUI1 homolog OS=Brassica oleracea PE=3 SV=1) HSP 1 Score: 179.104 bits (453), Expect = 1.892e-44 Identity = 89/113 (78.76%), Postives = 97/113 (85.84%), Query Frame = 1 Query: 235 MSDFDIQVXXXXXXXXXXKAEDSGAGSKEYVHIRVQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVRAGIVKKEHIKMHGF 573 MS+ D QV AEDSGAG+KEYVHIRVQQRNGRKSLTTVQGLKKE+SY KILKDLKKEFCCNGTVVQD ELGQVIQLQGDQRKNVSTFLV+AG+VKK+ I++HGF Sbjct: 1 MSELDSQVPTAFDPFADANAEDSGAGTKEYVHIRVQQRNGRKSLTTVQGLKKEYSYTKILKDLKKEFCCNGTVVQDSELGQVIQLQGDQRKNVSTFLVQAGLVKKDDIQIHGF 113
BLAST of CB611042 vs. ExPASy Swiss-Prot
Match: SUI1_PIMBR (Protein translation factor SUI1 homolog OS=Pimpinella brachycarpa PE=3 SV=1) HSP 1 Score: 157.918 bits (398), Expect = 4.514e-38 Identity = 78/113 (69.03%), Postives = 89/113 (78.76%), Query Frame = 1 Query: 235 MSDFDIQVXXXXXXXXXXKAEDSGAGSKEYVHIRVQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVRAGIVKKEHIKMHGF 573 M D DIQ+ + D+ +KEYVHIR+QQRNGRKSLTTVQGLKKE SY+KILKDLKK CCNGTVV D ELG+VIQLQGDQRKNVSTF+V+AGIVKK+ IK+H F Sbjct: 1 MVDSDIQIPTSFDPFAEAEITDATGSTKEYVHIRIQQRNGRKSLTTVQGLKKELSYDKILKDLKKALCCNGTVVNDKELGKVIQLQGDQRKNVSTFIVQAGIVKKDQIKVHNF 113
BLAST of CB611042 vs. ExPASy Swiss-Prot
Match: EIF1B_PIG (Eukaryotic translation initiation factor 1b OS=Sus scrofa GN=EIF1B PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 1.901e-28 Identity = 54/89 (60.67%), Postives = 74/89 (83.15%), Query Frame = 1 Query: 307 AGSKEYVHIRVQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVRAGIVKKEHIKMHGF 573 AG+++Y+HIR+QQRNGRK+LTTVQG+ ++ K++K KK+F CNGTV++ PE G+VIQLQGDQRKN+ FL+ GIVK+E +K+HGF Sbjct: 25 AGTEDYIHIRIQQRNGRKTLTTVQGIADDYDKKKLVKAFKKKFACNGTVIEHPEYGEVIQLQGDQRKNICQFLLEVGIVKEEQLKVHGF 113 The following BLAST results are available for this feature:
BLAST of CB611042 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 23
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Sequences
The
following sequences are available for this feature:
EST sequence >CB611042 ID=CB611042; Name=CB611042; organism=Citrus sinensis; type=EST; length=682bpback to top |