CB611094
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB611094 vs. ExPASy Swiss-Prot
Match: NOP56_MOUSE (Nucleolar protein 56 OS=Mus musculus GN=Nop56 PE=1 SV=2) HSP 1 Score: 90.1225 bits (222), Expect = 3.768e-18 Identity = 43/64 (67.19%), Postives = 50/64 (78.12%), Query Frame = 1 Query: 4 LANKCSIASRIDCFAEKNTTIFGEKLREQVEERLDFYDKGVAPRKNIDVMKAAIESTENNDTEM 195 LANKCSIASRIDCF+E T++FGEKLREQVEERL FY+ G PRKN+DVMK A+ E E+ Sbjct: 372 LANKCSIASRIDCFSEVPTSVFGEKLREQVEERLSFYETGEIPRKNLDVMKEAVVQAEEAAAEI 435
BLAST of CB611094 vs. ExPASy Swiss-Prot
Match: NOP56_PONAB (Nucleolar protein 56 OS=Pongo abelii GN=NOP56 PE=2 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 6.427e-18 Identity = 43/64 (67.19%), Postives = 50/64 (78.12%), Query Frame = 1 Query: 4 LANKCSIASRIDCFAEKNTTIFGEKLREQVEERLDFYDKGVAPRKNIDVMKAAIESTENNDTEM 195 LANKCSIASRIDCF+E T++FGEKLREQVEERL FY+ G PRKN+DVMK A+ E E+ Sbjct: 372 LANKCSIASRIDCFSEVPTSVFGEKLREQVEERLSFYETGEIPRKNLDVMKEAMVQAEEAAAEI 435
BLAST of CB611094 vs. ExPASy Swiss-Prot
Match: NOP56_MACFA (Nucleolar protein 56 OS=Macaca fascicularis GN=NOP56 PE=2 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 6.427e-18 Identity = 43/64 (67.19%), Postives = 50/64 (78.12%), Query Frame = 1 Query: 4 LANKCSIASRIDCFAEKNTTIFGEKLREQVEERLDFYDKGVAPRKNIDVMKAAIESTENNDTEM 195 LANKCSIASRIDCF+E T++FGEKLREQVEERL FY+ G PRKN+DVMK A+ E E+ Sbjct: 372 LANKCSIASRIDCFSEVPTSVFGEKLREQVEERLSFYETGEIPRKNLDVMKEAMVQAEEAAAEI 435
BLAST of CB611094 vs. ExPASy Swiss-Prot
Match: NOP56_HUMAN (Nucleolar protein 56 OS=Homo sapiens GN=NOP56 PE=1 SV=4) HSP 1 Score: 89.3521 bits (220), Expect = 6.427e-18 Identity = 43/64 (67.19%), Postives = 50/64 (78.12%), Query Frame = 1 Query: 4 LANKCSIASRIDCFAEKNTTIFGEKLREQVEERLDFYDKGVAPRKNIDVMKAAIESTENNDTEM 195 LANKCSIASRIDCF+E T++FGEKLREQVEERL FY+ G PRKN+DVMK A+ E E+ Sbjct: 372 LANKCSIASRIDCFSEVPTSVFGEKLREQVEERLSFYETGEIPRKNLDVMKEAMVQAEEAAAEI 435
BLAST of CB611094 vs. ExPASy Swiss-Prot
Match: NOP56_BOVIN (Nucleolar protein 56 OS=Bos taurus GN=NOP56 PE=2 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 6.427e-18 Identity = 43/64 (67.19%), Postives = 50/64 (78.12%), Query Frame = 1 Query: 4 LANKCSIASRIDCFAEKNTTIFGEKLREQVEERLDFYDKGVAPRKNIDVMKAAIESTENNDTEM 195 LANKCSIASRIDCF+E T++FGEKLREQVEERL FY+ G PRKN+DVMK A+ E E+ Sbjct: 372 LANKCSIASRIDCFSEVPTSVFGEKLREQVEERLSFYETGEIPRKNLDVMKEAMVQAEEAAAEI 435
BLAST of CB611094 vs. ExPASy Swiss-Prot
Match: YZVL_CAEEL (Uncharacterized NOP5 family protein K07C5.4 OS=Caenorhabditis elegans GN=K07C5.4 PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 4.311e-14 Identity = 38/72 (52.78%), Postives = 52/72 (72.22%), Query Frame = 1 Query: 4 LANKCSIASRIDCFAEKNTTIFGEKLREQVEERLDFYDKGVAPRKNIDVMK----AAIESTENNDTEMKEAA 207 LANKCSIA+R+DCF+E + +GE LR+QVE+RL+++ G P+KNIDVMK AA+E E + K+AA Sbjct: 378 LANKCSIAARVDCFSETPVSTYGEFLRQQVEDRLEYFTSGTVPKKNIDVMKEAEEAAVEVKEKVIKKKKKAA 449
BLAST of CB611094 vs. ExPASy Swiss-Prot
Match: NOP56_DICDI (Nucleolar protein 56 OS=Dictyostelium discoideum GN=nop56 PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 1.062e-12 Identity = 34/74 (45.95%), Postives = 52/74 (70.27%), Query Frame = 1 Query: 4 LANKCSIASRIDCFAEKNTTIFGEKLREQVEERLDFYDKGVAPRKNIDVMKAAIESTENN--DTEMKEAATDTS 219 L+NK SIA+RIDCF++ T FG L++QV +R+ F++ GVAP++N+DVMK IE E + + E+K ++S Sbjct: 370 LSNKISIATRIDCFSDNPTAKFGVALKQQVADRIKFFNNGVAPKRNLDVMKEVIEEVEKDFAEEEVKPVVKESS 443
BLAST of CB611094 vs. ExPASy Swiss-Prot
Match: NOP56_SCHPO (Nucleolar protein 56 OS=Schizosaccharomyces pombe GN=nop56 PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 5.270e-12 Identity = 35/55 (63.64%), Postives = 41/55 (74.55%), Query Frame = 1 Query: 4 LANKCSIASRIDCFAEKNTTIFGEKLREQVEERLDFYDKGVAPRKNIDVMKAAIE 168 LANKCSIASRID F++ TT FG+ LR QVEERL+F+D GVAP +N M A E Sbjct: 375 LANKCSIASRIDNFSDAPTTAFGQVLRRQVEERLNFFDTGVAPTRNSIAMAEAYE 429 The following BLAST results are available for this feature:
BLAST of CB611094 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CB611094 ID=CB611094; Name=CB611094; organism=Citrus sinensis; type=EST; length=259bpback to top |