CB611095

Overview
NameCB611095
Unique NameCB611095
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length393
Libraries
Library NameType
Mature Albedocdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2603 contig Csv1_Contig2603:836..1228. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB611095 vs. ExPASy Swiss-Prot
Match: AAT5_ARATH (Aspartate aminotransferase, chloroplastic OS=Arabidopsis thaliana GN=ASP5 PE=1 SV=2)

HSP 1 Score: 152.91 bits (385), Expect = 4.621e-37
Identity = 73/81 (90.12%), Postives = 78/81 (96.30%), Query Frame = 1
Query:    4 VRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLNKAQSDNMTNMWHVYTTKDGRISLAGLSLAKCEYLADAIIDSYHNVS 246
            VRQ+L+DSL +KDKSGKDWSFIL+QIGMFSFTGLNKAQSDNMT+ WHVY TKDGRISLAGLSLAKCEYLADAIIDSYHNVS
Sbjct:  373 VRQELYDSLVSKDKSGKDWSFILKQIGMFSFTGLNKAQSDNMTDKWHVYMTKDGRISLAGLSLAKCEYLADAIIDSYHNVS 453          
BLAST of CB611095 vs. ExPASy Swiss-Prot
Match: AATM_LUPAN (Aspartate aminotransferase P2, mitochondrial (Fragment) OS=Lupinus angustifolius PE=2 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 1.138e-35
Identity = 70/81 (86.42%), Postives = 77/81 (95.06%), Query Frame = 1
Query:    4 VRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLNKAQSDNMTNMWHVYTTKDGRISLAGLSLAKCEYLADAIIDSYHNVS 246
            VRQ+L+DS+S+KDKSGKDWSFIL+QIGMFS+TGLNK QSDNMTN WHVY TKDGRISLAGLSLAKCEYLADAIIDS+H VS
Sbjct:  374 VRQQLYDSISSKDKSGKDWSFILKQIGMFSYTGLNKNQSDNMTNKWHVYMTKDGRISLAGLSLAKCEYLADAIIDSFHYVS 454          
BLAST of CB611095 vs. ExPASy Swiss-Prot
Match: AATC_DAUCA (Aspartate aminotransferase, cytoplasmic OS=Daucus carota PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 1.546e-16
Identity = 43/73 (58.90%), Postives = 54/73 (73.97%), Query Frame = 1
Query:    4 VRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLNKAQSDNMTNMWHVYTTKDGRISLAGLSLAKCEYLADAI 222
            +RQ+LF++L AK   G DWS I++QIGMF+FTGLN  Q   MTN +H+Y T DGRIS+AGLS     +LADAI
Sbjct:  326 MRQELFNALQAKGTPG-DWSHIVKQIGMFTFTGLNSEQVTFMTNEYHIYLTSDGRISMAGLSSRTVPHLADAI 397          
BLAST of CB611095 vs. ExPASy Swiss-Prot
Match: AAT2_ARATH (Aspartate aminotransferase, cytoplasmic isozyme 1 OS=Arabidopsis thaliana GN=ASP2 PE=1 SV=2)

HSP 1 Score: 82.8037 bits (203), Expect = 5.873e-16
Identity = 40/73 (54.79%), Postives = 55/73 (75.34%), Query Frame = 1
Query:    4 VRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLNKAQSDNMTNMWHVYTTKDGRISLAGLSLAKCEYLADAI 222
            +RQ+LF+++ A+   G DWS I++QIGMF+FTGLNK Q + MT  +H+Y T DGRIS+AGLS     +LADA+
Sbjct:  326 MRQQLFEAIQARGTPG-DWSHIIKQIGMFTFTGLNKEQVEFMTKEFHIYMTSDGRISMAGLSSKTVPHLADAM 397          
BLAST of CB611095 vs. ExPASy Swiss-Prot
Match: AAT3_ARATH (Aspartate aminotransferase, chloroplastic OS=Arabidopsis thaliana GN=ASP3 PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 2.915e-15
Identity = 40/73 (54.79%), Postives = 53/73 (72.60%), Query Frame = 1
Query:    4 VRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLNKAQSDNMTNMWHVYTTKDGRISLAGLSLAKCEYLADAI 222
            +R++LF++L  +   G DWS I++QIGMF+FTGLN AQ   MT  +H+Y T DGRIS+AGLS     +LADAI
Sbjct:  370 MRKQLFEALRTRGTPG-DWSHIIKQIGMFTFTGLNPAQVSFMTKEYHIYMTSDGRISMAGLSSKTVPHLADAI 441          
BLAST of CB611095 vs. ExPASy Swiss-Prot
Match: AATC_ORYSJ (Aspartate aminotransferase, cytoplasmic OS=Oryza sativa subsp. japonica GN=Os01g0760600 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 6.493e-15
Identity = 40/73 (54.79%), Postives = 52/73 (71.23%), Query Frame = 1
Query:    4 VRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLNKAQSDNMTNMWHVYTTKDGRISLAGLSLAKCEYLADAI 222
            +RQ+LFD+L  ++  G DWS I++QIGMF+FTGLN  Q   M   +H+Y T DGRIS+AGLS     +LADAI
Sbjct:  328 MRQQLFDALKTRETPG-DWSHIIKQIGMFTFTGLNSDQVAFMRQEYHIYMTSDGRISMAGLSGRTIPHLADAI 399          
BLAST of CB611095 vs. ExPASy Swiss-Prot
Match: AAT1_MEDSA (Aspartate aminotransferase 1 OS=Medicago sativa GN=AAT-1 PE=2 SV=2)

HSP 1 Score: 79.337 bits (194), Expect = 6.493e-15
Identity = 40/73 (54.79%), Postives = 52/73 (71.23%), Query Frame = 1
Query:    4 VRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLNKAQSDNMTNMWHVYTTKDGRISLAGLSLAKCEYLADAI 222
            +RQ+LFD+L A+   G DWS I++QIGMF+FTGLN  Q   +T  +H+Y T DGRIS+AGLS     +LA AI
Sbjct:  339 MRQQLFDALRARGTPG-DWSHIIKQIGMFTFTGLNPEQVSILTKEYHIYLTSDGRISMAGLSSKTVPHLAHAI 410          
BLAST of CB611095 vs. ExPASy Swiss-Prot
Match: AATC_DICDI (Aspartate aminotransferase, cytoplasmic OS=Dictyostelium discoideum GN=aatB PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 4.209e-14
Identity = 37/76 (48.68%), Postives = 52/76 (68.42%), Query Frame = 1
Query:    4 VRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLNKAQSDNMTNMWHVYTTKDGRISLAGLSLAKCEYLADAIIDS 231
            VRQK+ D+L A+   G +W  I+ QIGMF++TGL K Q D + N +H+Y    GR+SLAGL+    +Y ADAI+D+
Sbjct:  359 VRQKVLDALIARKVPG-NWEHIVNQIGMFTYTGLTKPQVDILVNKYHIYLLGSGRVSLAGLNNKNIDYFADAILDA 433          
BLAST of CB611095 vs. ExPASy Swiss-Prot
Match: AATM_DICDI (Aspartate aminotransferase, mitochondrial OS=Dictyostelium discoideum GN=aatA PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 3.939e-12
Identity = 35/73 (47.95%), Postives = 48/73 (65.75%), Query Frame = 1
Query:    4 VRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLNKAQSDNMTNMWHVYTTKDGRISLAGLSLAKCEYLADAI 222
            +R++L   L  K  S +DWS I  QIGMF FTGL   Q D + N +H+Y T++GRIS+AG++    EYLA A+
Sbjct:  348 MREQLVKYLK-KHGSTRDWSHITTQIGMFCFTGLTPEQVDRLANEYHIYLTRNGRISIAGINSTNVEYLAKAM 419          
BLAST of CB611095 vs. ExPASy Swiss-Prot
Match: AAT4_ARATH (Aspartate aminotransferase, cytoplasmic isozyme 2 OS=Arabidopsis thaliana GN=ASP4 PE=2 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 6.720e-12
Identity = 36/73 (49.32%), Postives = 49/73 (67.12%), Query Frame = 1
Query:    4 VRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLNKAQSDNMTNMWHVYTTKDGRISLAGLSLAKCEYLADAI 222
            +RQ+L+ +L A+   G DWS I++ IGMF+FTGL++ Q   M   +H+Y T DGRIS+A LS      LADAI
Sbjct:  324 MRQQLYAALEARGTPG-DWSHIIKHIGMFTFTGLSEEQVRLMAKEYHIYMTYDGRISMASLSSKTVPQLADAI 395          
The following BLAST results are available for this feature:
BLAST of CB611095 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
AAT5_ARATH4.621e-3790.12Aspartate aminotransferase, chloroplastic OS=Arabi... [more]
AATM_LUPAN1.138e-3586.42Aspartate aminotransferase P2, mitochondrial (Frag... [more]
AATC_DAUCA1.546e-1658.90Aspartate aminotransferase, cytoplasmic OS=Daucus ... [more]
AAT2_ARATH5.873e-1654.79Aspartate aminotransferase, cytoplasmic isozyme 1 ... [more]
AAT3_ARATH2.915e-1554.79Aspartate aminotransferase, chloroplastic OS=Arabi... [more]
AATC_ORYSJ6.493e-1554.79Aspartate aminotransferase, cytoplasmic OS=Oryza s... [more]
AAT1_MEDSA6.493e-1554.79Aspartate aminotransferase 1 OS=Medicago sativa GN... [more]
AATC_DICDI4.209e-1448.68Aspartate aminotransferase, cytoplasmic OS=Dictyos... [more]
AATM_DICDI3.939e-1247.95Aspartate aminotransferase, mitochondrial OS=Dicty... [more]
AAT4_ARATH6.720e-1249.32Aspartate aminotransferase, cytoplasmic isozyme 2 ... [more]
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Properties
Property NameValue
Genbank descriptionALBEDO0001_IVaF_C12 Mature Albedo Citrus sinensis cDNA clone ALBEDO0001_IVaF_C12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB611095 ID=CB611095; Name=CB611095; organism=Citrus sinensis; type=EST; length=393bp
GGGGTGAGACAGAAGCTTTTTGATAGTCTCTCTGCAAAAGATAAGAGTGG
AAAAGATTGGTCATTCATTCTCAGGCAGATTGGCATGTTCTCATTCACAG
GCTTGAACAAAGCGCAGAGTGATAATATGACAAATATGTGGCATGTCTAC
ACGACCAAGGATGGGAGGATATCCTTGGCTGGATTGTCTTTGGCCAAATG
TGAATATCTTGCCGATGCCATCATTGATTCATATCACAATGTCAGTTGAA
GTTGTTGGACCACTAGACAGATATTCACATTAGAAATCAGACCGTTAAAA
TGTTGGGGAGTCCAAATTGATTATTATTTACTCCAATGCTTACAAGTTCC
AATGGTCAAGTTACAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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